Basic Information

Gene Symbol
pnr_1
Assembly
GCA_963924145.1
Location
OZ001642.1:33573479-33592352[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-17 2.9e-13 51.0 4.2 1 35 240 273 240 274 0.97
2 2 6.8e-18 4.3e-14 53.7 5.9 1 34 326 358 326 360 0.98

Sequence Information

Coding Sequence
ATGttcggcggcggcggcggcggctaCGGCGGCGGCAACGGCGGCGAGTGCGGCGACGGCTACGGGCTGGGCTACGTCGCCGGCGGCGGCCGCCTGCAGCAGTACGCGGCTCACTTCGCGCCGCATCAGAATGTGTGGCACCACCATCACGCCGCGCACCATGACTCATACGGTGGCGGCGGCGTGAGCGGCGTGGGCGGCGTGGCCGGCGTGGGCGGCGTGCCCGGCGGCCTCTACTCGCAGAATGTGGTCATGGGCTCCTGGTGCGCGCCCTACGACGCGCTGCAACGACCTCCGGGATATGGCGCTGCTACTAATCCTGATAAGTGCTTGCCCCAGTGCCGCGATATGACTGCATTATTCCGCATTTCTGACAGcacatattttataacaatccTCGTCAACTTACGCACCTGCCTAAAACCTCGAGCTGTTGCTGTTATCGCGAGACAATTAACGGATGAGATAAACGGCGCCGAATTAATGGATTTGGGTGAAGGTGCGCAGGCGCAGCTTGGCGACATACCTACCATACCCTTGGTAAGGGACATCAGTTGCTGGAACCTCATTGCAATTACACTGGAAGAGCTTGAAATTTGGGTGCTGAAGACTCCCAGGAAAGTTGGGAAGAGCGATAGGTCCTCCGTCCGGTTGGCTGACCGTAAAGCGTGCGCAGATGGCGTCCTGGAGGTGTACGAGGACGGCAGCGGACGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACGCCACGGGGCACTACCTCTGCAACGCGTGCGGCCTGTACACGCGCATCAACGGCGTCAACCGGCCCCTCGTCAAGCCCACCAAGCGCCTGGTGAGTGCCGACGCCGAGCTGCTCACGCGCTTCTATAAAGACGGCTCCGTGCAAAGATGGATGAGTGTGGAGGGCATGGCCCGCGGGATGAAGAAGTCGGCAGCGCGGCGGCACGGGCAGTGCTGTACCAACTGCGGGTCGCGCACCACGACGCTGTGGCGACGCAACAACGACGGAGAGCCCGTCTGCAACGCGTGCGGACTGTACTACAAGCTGCACGGCATCAACCGACCACTAGCAATGAGGAAAGATGGTATCCAGACAAGGAAACGCAAGCCCAAGAAGTCCGGCAGCGGAACCAAACCTCCTCAGGACGCTGCAAAGAAGGAAGAACACAGCTCACCTAGTTTAGATGACAGCAAACCGAGCGTCTCCGAGGTGCCACTCCCTCTAACGTCGTCCATGTCGAGCCACGGCAGCCACGTGACGACGCCGAAGCTGCGCGAGCACGAGTCcgcgcacgcgcacacacacgcacacacgcataCACACAACTCGCAGTACCCGCTCGGGCTCGCGTCGCCGCCCTTCCTGTCCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCGCCGCCGGCGGGTACGACGGGTACTCGCACGCGACTCAGCACTACCATTCGCAGCAGCATTATTTGCACGCCCTACAGTACGGGTTAAGCAATGGCGAAGAGGAAGAAGGCAGCGGCTTCCTGCACCAGCGTAACGTGACTGCGCACGCCAAGCTCATGGCTTCCACGTAG
Protein Sequence
MFGGGGGGYGGGNGGECGDGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHAAHHDSYGGGGVSGVGGVAGVGGVPGGLYSQNVVMGSWCAPYDALQRPPGYGAATNPDKCLPQCRDMTALFRISDSTYFITILVNLRTCLKPRAVAVIARQLTDEINGAELMDLGEGAQAQLGDIPTIPLVRDISCWNLIAITLEELEIWVLKTPRKVGKSDRSSVRLADRKACADGVLEVYEDGSGRECVNCGANNTPLWRRDATGHYLCNACGLYTRINGVNRPLVKPTKRLVSADAELLTRFYKDGSVQRWMSVEGMARGMKKSAARRHGQCCTNCGSRTTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGSGTKPPQDAAKKEEHSSPSLDDSKPSVSEVPLPLTSSMSSHGSHVTTPKLREHESAHAHTHAHTHTHNSQYPLGLASPPFLSNPSLFNIKSEPSAAGGYDGYSHATQHYHSQQHYLHALQYGLSNGEEEEGSGFLHQRNVTAHAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-