Basic Information

Gene Symbol
phc2_1
Assembly
GCA_963924145.1
Location
OZ001649.1:1407353-1417568[-]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.3e-06 0.018 16.9 6.5 2 28 13 40 12 41 0.96
2 6 0.00017 2.3 10.2 0.6 10 28 77 95 76 96 0.94
3 6 0.00017 2.3 10.2 0.6 10 28 132 150 131 151 0.94
4 6 0.00017 2.3 10.2 0.6 10 28 187 205 186 206 0.94
5 6 0.00017 2.3 10.2 0.6 10 28 242 260 241 261 0.94
6 6 0.00017 2.3 10.2 0.6 10 28 297 315 296 316 0.94

Sequence Information

Coding Sequence
ATGCTGtCCCCGGAGGAGCTGCGCGTGTGCGGGCCGTGCGGCGTGGGCGGGTGCCGCGGGCTGGGCTCTGCGCGCGGCGGGCCGCACAAGCAGCACAACGCGGCGTCCGCGTGCCCCTACCGCccgcgccgcgcgccgccgccCGACCGCCTCGCGCCGCCGCACCCCGCGCCCGACCGCGCGCGCCGGTACGTACACAGCGACACTAGGGCAGCGCCGGTACCGACACTAGGGCACGCGCGGCGGCCGCACAAGCAGCACAACGCGGCGTCCGCGTGCCCCTACCGCccgcgccgcgcgccgccgccCGACCGCCTCGCGCCGCCGCACCCCGCGCCCGACCGCGCGCGCCGGTACGTACACAGCGACACTAGGGCAGCGCCGGTACCGACACTAGGGCACGCGCGGCGGCCGCACAAGCAGCACAACGCGGCGTCCGCGTGCCCCTACCGCccgcgccgcgcgccgccgccCGACCGCCTCGCGCCGCCGCACCCCGCGCCCGACCGCGCGCGCCGGTACGTACACAGCGACACTAGGGCAGCGCCGGTACCGACACTAGGGCACGCGCGGCGGCCGCACAAGCAGCACAACGCGGCGTCCGCGTGCCCCTACCGCccgcgccgcgcgccgccgccCGACCGCCTCGCGCCGCCGCACCCCGCGCCCGACCGCGCGCGCCGGTACGTACACAGCGACACTAGGGCAGCGCCGGTACCGACACTAGGGCACGCGCGGCGGCCGCACAAGCAGCACAACGCGGCGTCCGCGTGCCCCTACCGCccgcgccgcgcgccgccgccCGACCGCCTCGCGCCGCCGCACCCCGCGCCCGACCGCGCGCGCCGGTACGTACACAGCGACACTAGGGCAGCGCCGGTACCGACACTAGGGCACGCGCGGCGGCCGCACAAGCAGCACAACGCGGCGTCCGCGTGCCCCTACCGCccgcgccgcgcgccgccgccCGACCGCCTCGCGCCGCCGCACCCCGCGCCCGACCGCGCGCGCCGGATTCCTATCAAAACGTCCAAATCAATACACACGAGCACTCCTAACAGTGATTCTGCTAAAGACAAgGAACGCTTCTCAGCGAAAAATAGGGCGCCTAAACACAAACGCGTTGAGGAGGTGAAAAATGATCAGATATCGGATGACGAGTCGGAGCCAAGCATCGGTGGGAAGCGATGGCGCGGCAGCGAGGGCTCACGGGACGAGCGCGAGCGGGACAGCAAGAGCCGCGAGCGGGACAGCAAGAGCCACGATCGCGATAGCAAGAGTCGCGAGCGAGACAGCAAGAGTCGCGAGCGAGACAGCAAGAGTCGCGAGCGAGACAGCAAGAGCGAAGTGCGGGAAGGCAAGAATAAGGAGCACAACGAGCGGCCGCTGCCGAGGGCACATCTCGAGAAGCACATCGCAGAGCTTGACCTGCCGAGCGACCCCACTGCATGGACTGAGAAGGACGTGTGCGCATTAGTGGCGCGCGTGGGCGGCGCGAGCGCAGGCGCGGCGTGCGCGGCGGCGCGGCTGCGCGGCCCGGAGCTGTGCATGGCCTCGCGCGAGGAGCTCGTCTCCTGCCTGCGCCTGCGCCTCGGACCCGCTGTCAAGGTGTACGCCGCAGTGCGCCTGCTGCGCGACACGTGCGCGGCGTACTCGTGA
Protein Sequence
MLSPEELRVCGPCGVGGCRGLGSARGGPHKQHNAASACPYRPRRAPPPDRLAPPHPAPDRARRYVHSDTRAAPVPTLGHARRPHKQHNAASACPYRPRRAPPPDRLAPPHPAPDRARRYVHSDTRAAPVPTLGHARRPHKQHNAASACPYRPRRAPPPDRLAPPHPAPDRARRYVHSDTRAAPVPTLGHARRPHKQHNAASACPYRPRRAPPPDRLAPPHPAPDRARRYVHSDTRAAPVPTLGHARRPHKQHNAASACPYRPRRAPPPDRLAPPHPAPDRARRYVHSDTRAAPVPTLGHARRPHKQHNAASACPYRPRRAPPPDRLAPPHPAPDRARRIPIKTSKSIHTSTPNSDSAKDKERFSAKNRAPKHKRVEEVKNDQISDDESEPSIGGKRWRGSEGSRDERERDSKSRERDSKSHDRDSKSRERDSKSRERDSKSRERDSKSEVREGKNKEHNERPLPRAHLEKHIAELDLPSDPTAWTEKDVCALVARVGGASAGAACAAARLRGPELCMASREELVSCLRLRLGPAVKVYAAVRLLRDTCAAYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-