Basic Information

Insect: Pyrausta purpuralis
Gene Symbol: -
Assembly: GCA_963924145.1
Location: OZ001661.1:21111480-21119027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.13 22 7.6 1.2 1 20 366 385 366 388 0.93

2 12 0.26 45 6.6 0.5 2 23 396 418 395 418 0.92

3 12 0.62 1.1e+02 5.5 5.4 1 23 422 444 422 444 0.96

4 12 0.0087 1.5 11.3 2.3 1 23 449 472 449 472 0.98

5 12 0.013 2.2 10.7 0.0 1 23 475 498 475 498 0.93

6 12 0.049 8.3 8.9 0.2 1 22 509 530 509 534 0.92

7 12 6.8e-05 0.012 17.9 1.5 2 23 552 574 551 575 0.96

8 12 0.038 6.5 9.3 1.4 2 23 594 616 593 616 0.94

9 12 0.0051 0.87 12.0 0.2 2 23 630 651 630 651 0.95

10 12 0.0077 1.3 11.5 0.8 2 23 657 678 656 678 0.96

11 12 1.7e-05 0.0028 19.8 0.8 1 23 684 706 684 706 0.96

12 12 1.5e-05 0.0025 20.0 4.7 1 23 712 735 712 736 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.13	22	7.6	1.2	1	20	366	385	366	388	0.93
2	12	0.26	45	6.6	0.5	2	23	396	418	395	418	0.92
3	12	0.62	1.1e+02	5.5	5.4	1	23	422	444	422	444	0.96
4	12	0.0087	1.5	11.3	2.3	1	23	449	472	449	472	0.98
5	12	0.013	2.2	10.7	0.0	1	23	475	498	475	498	0.93
6	12	0.049	8.3	8.9	0.2	1	22	509	530	509	534	0.92
7	12	6.8e-05	0.012	17.9	1.5	2	23	552	574	551	575	0.96
8	12	0.038	6.5	9.3	1.4	2	23	594	616	593	616	0.94
9	12	0.0051	0.87	12.0	0.2	2	23	630	651	630	651	0.95
10	12	0.0077	1.3	11.5	0.8	2	23	657	678	656	678	0.96
11	12	1.7e-05	0.0028	19.8	0.8	1	23	684	706	684	706	0.96
12	12	1.5e-05	0.0025	20.0	4.7	1	23	712	735	712	736	0.97

Sequence Information

Coding Sequence: atggtaTGTTATTGTTGTGTGAAAGGGTGTAATAATAACAGCAATAGTGCCAAAAAGGACCCAAGGGCTATATCTTTTCACGCGTTTCCTTCGAACCCAGATCTAAGACAAAAATGGCTTCGGGCTATAGGCAGGCCGGCGTGGGATCCTCCAAGTCATGTTCGCATTTGCAGCGTCCACTTTAGTTCTGATAAAATCAACCAGGATGGCTATAGAACTCGGATAAAGGAAGATGCTGTTCCTGTGACTGCTTTACCTCCTAACTCAAATTTTGAAGCATCCAACATAGAAGTGTGCAGGATATGTTTGGCTACCGATGTGAAGATGCTCAGTCTTGAGAAGGGACTTCTAAAAAAATTTATGGAGACAATCACTTGTTCAaatGATTATAAATGCAGTATAGAAGGTCTTCCTCAATTTGTGTGCTATGAATGTGCAGCTAGCCTTTGGAAGTTTCACAAGTTAATGGAAAAGAGTATGACAGCACAAGCAACTTTACTTGATATTTTTGCTGAGAACTCTCAGATCaccaaaagtttaattaaaacaagAGATAGAAAACTATTGAATCTCCAATCCACATTAAGTCACAACTATAAAATGCCCGGTCATTTCTTTGAATATGTCTATAATGATGAAGAAAACACATCTTATCTCAAAAAACAGCACCAACATGGTGCTATAATTAAACCTTACAACGAAGAAAACTTCAAATATAAATCTGAGATTATAAAGGATAAAGACACAGAAATTATAGTACCAAAATGTGAACTAATTGAAGACCTTAAAGAGGATGACAAAGACAACAACACATACAATGATGATAACCGTGATGATTTTATGTCTGATAATGAAATTGGAGATGATGGATTGCCAAAAATCTGTAATAAGGATATAAAATGTAACATAAACCTTAGCAATGAACTAGTTAAAACTCACAGACCAAAGTTGAAGAGGTCTAAAAGTCTTAATGGCTTAACTCCTGATGAGGTTGAAatttctaaatattttaatatcgtCATATTATCGgAGGCAGAACAAATCGATGAATGGAAGAAAATGGTCAGACAATCATCTTTTACCAGTGAAAACATTTATGAGTGTGAGGTTTGCCTCAAAATTTTTGCAAGCAAAACTGCTTTTGATAGCCATGTTACATGTCATAATCCAAATCATGGGACATCTGAATGCCGTGTGTGTAAGCGTCGATTTAAAAATGGCGTGCTTGCAAAGTCACATGCAAACCGCGCACACGCCAAAAAGTTCCACTGCAGATCGTGCACCAAAGTTTTTAGCAATGTgAGCGTAGCAAAAAAGCATCATCTTCGACACGTCGGCCACCGCTACTCGTGCTCCCACTGCGCATACGGCACTGCGCACGCGTCTGCGCTCGCGCATCACGCGCGCACGCAGCACGCGACACACGCGTGCGTCACGTGCGGACGTGCCTTCGTCAGCGAGAGGGGACTGGCCCTGCATGCTGCCACGGCTCACAGGGATGTGAAGGAGCCGACTGATGCTGAATTCAGCTGTGAAGCGTGTGGAATAAAATTCACATCAGAAGGAGCTCGACGCGTCCACATTTTGACTTCCAAGCAGCATCAGAAAAACTCTCAGCTCACTCCTGATCCAATAGATCCTTCACTGAAGACAACATGCAAACAGTGTGGTTTGTACTTTCCAAGTAGAAAAGAGTTGGTGGATCATATGAGGACGGAACACCATAGACCGGCTAAGAAGAAGACTACATGGAGATTACCGGGAGACTCTTATCCCACGCAGTGTGAGCATTGCGGGTGGTCAGTGAGCGACCGCCAAGAGCACTGGCGGCACGTGCGCGCGCAGCACCCGGCGCTGCGGCGCCACTACCGGCCCGTCATCACCGCCGTCTGCGACGCTTGCGGCAAGGGCTTCCAGAACGCCACGAAACTGCGCATTCACGAACTCCGCCACGGCAGCCCGACGCTGCGTTGCGCAACCTGCGCACGCATGTTCCACGACAAGTATGCGCTTGCGCGGCACACTGCCTCGCACGCGCCGAGACAAACGCACGCTTGTGGCGTATGCAATCGCGCGTTCTCCTTGAAGGGCAATCTCAAGAGGCATGAGCGGGTCCACACGGGCGTGACTCCTTACGAGTGCAGTCTGTGTAACAAACGGTTCCGTCACTCGAGCAGCGTGCGCCTGCACATACGTACCGTGCACCACAAGCTGCCGCATCCGCCAAGGGCCCCGCGCGTAGCTAAGGACGCTACTTTTgggaaataa
Protein Sequence: MVCYCCVKGCNNNSNSAKKDPRAISFHAFPSNPDLRQKWLRAIGRPAWDPPSHVRICSVHFSSDKINQDGYRTRIKEDAVPVTALPPNSNFEASNIEVCRICLATDVKMLSLEKGLLKKFMETITCSNDYKCSIEGLPQFVCYECAASLWKFHKLMEKSMTAQATLLDIFAENSQITKSLIKTRDRKLLNLQSTLSHNYKMPGHFFEYVYNDEENTSYLKKQHQHGAIIKPYNEENFKYKSEIIKDKDTEIIVPKCELIEDLKEDDKDNNTYNDDNRDDFMSDNEIGDDGLPKICNKDIKCNINLSNELVKTHRPKLKRSKSLNGLTPDEVEISKYFNIVILSEAEQIDEWKKMVRQSSFTSENIYECEVCLKIFASKTAFDSHVTCHNPNHGTSECRVCKRRFKNGVLAKSHANRAHAKKFHCRSCTKVFSNVSVAKKHHLRHVGHRYSCSHCAYGTAHASALAHHARTQHATHACVTCGRAFVSERGLALHAATAHRDVKEPTDAEFSCEACGIKFTSEGARRVHILTSKQHQKNSQLTPDPIDPSLKTTCKQCGLYFPSRKELVDHMRTEHHRPAKKKTTWRLPGDSYPTQCEHCGWSVSDRQEHWRHVRAQHPALRRHYRPVITAVCDACGKGFQNATKLRIHELRHGSPTLRCATCARMFHDKYALARHTASHAPRQTHACGVCNRAFSLKGNLKRHERVHTGVTPYECSLCNKRFRHSSSVRLHIRTVHHKLPHPPRAPRVAKDATFGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01282351;
90% Identity: iTF_01282351;
80% Identity: iTF_01282351;