Basic Information

Insect: Pyrausta purpuralis
Gene Symbol: -
Assembly: GCA_963924145.1
Location: OZ001670.1:3217015-3230666[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00012 0.02 17.2 0.8 1 23 163 185 163 185 0.98

2 12 1.4 2.3e+02 4.4 0.5 1 23 192 215 192 215 0.93

3 12 4 6.8e+02 2.9 4.5 1 23 219 241 219 241 0.95

4 12 0.49 83 5.8 5.1 1 23 246 268 246 269 0.94

5 12 0.0052 0.88 12.0 0.2 3 23 276 297 274 297 0.95

6 12 0.075 13 8.4 0.3 2 20 311 329 311 331 0.94

7 12 0.0041 0.69 12.3 0.8 3 23 344 364 343 364 0.97

8 12 0.011 1.9 10.9 0.5 2 23 377 399 376 399 0.96

9 12 0.00029 0.049 15.9 2.2 2 23 414 435 413 435 0.97

10 12 8.9e-07 0.00015 23.8 0.7 1 23 441 463 441 463 0.99

11 12 1.2e-07 2e-05 26.6 0.4 1 23 469 491 469 491 0.98

12 12 1.6e-07 2.7e-05 26.2 1.8 1 23 497 520 497 520 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00012	0.02	17.2	0.8	1	23	163	185	163	185	0.98
2	12	1.4	2.3e+02	4.4	0.5	1	23	192	215	192	215	0.93
3	12	4	6.8e+02	2.9	4.5	1	23	219	241	219	241	0.95
4	12	0.49	83	5.8	5.1	1	23	246	268	246	269	0.94
5	12	0.0052	0.88	12.0	0.2	3	23	276	297	274	297	0.95
6	12	0.075	13	8.4	0.3	2	20	311	329	311	331	0.94
7	12	0.0041	0.69	12.3	0.8	3	23	344	364	343	364	0.97
8	12	0.011	1.9	10.9	0.5	2	23	377	399	376	399	0.96
9	12	0.00029	0.049	15.9	2.2	2	23	414	435	413	435	0.97
10	12	8.9e-07	0.00015	23.8	0.7	1	23	441	463	441	463	0.99
11	12	1.2e-07	2e-05	26.6	0.4	1	23	469	491	469	491	0.98
12	12	1.6e-07	2.7e-05	26.2	1.8	1	23	497	520	497	520	0.97

Sequence Information

Coding Sequence: ATGGATTACATCCTTAGTTTAAGAAAGCAGTCACCATttacattttctattaaaaacaATGAAACAATTACATGTGATGTTGACACTGAGAATGAAGACCATTCAGAGATAGCAgaacaaataataaaagaagAAAGAGAATACGGTTTCGATGACGGGGATGACTATAAAGTCAAAAGCGAATCAAGTGATGACGAACCGTTGCCAAGACTAATCAAGACTCGATTATCTGTTGAACGGTCAATCAGAAAGCCCAAAGTCTCAAAAAAACCTAAACAAATCCTCAAGAAAATTATTAAGAAGAaggtagaaataaaaaaagttgaagACAAAGAGAAAAAGTTAAAGAAACATGAAGAAGAAAAAAGTCAAATGGAAACGGATGATATACCCAAAGGTGAGGTTGATGTTGTGATGTTGACGAAAGAAGAACAGTTACAAGAAGtgttatcgaggaagacttcaATGAATTATTTGAGTTCCTTCTACAAGTGCGAGCTGTGTTTCAAAGGGTTCATATCGGAGGGTACTTATAAGAATCATATGGCGAGGCATGATCCGAGTGCCGGAGCTCACGAATGTGACGTATGTCACATCCGTTTGCAAGATGGACGCGCGCTCCGCGGTCATCTAGCAAAGATACACGAGTGGAACTATGTGTGCAAGCTTTGTAAACACATATCTAAATCTAAGCATTTAGCGAAGTTACACTCAAAATGGCACAGCGGGCACACGTTTGTATGCAAGTTTTGTGGCATGCTGTTCACAAAGAAAACAAGTCATCTCTCCCACGTTCGTATCCACCATCCCTCCGAGAATGTGAACTGTGATGTGTGCGGCGAGGCGTTTATAGGAGAGCATGGACTTAAAATGCATAAACAGAAGGCGCATAGAGACATCAAGAAATCAATAGAACCGGTGTCGGACAATCGTTGCGAAAACTGCAAGGTGCAGTTCCAAAACGCGGAAGCTTTCAAACGGCACACGAGCGGCAACGAAGATGGATtatgtcataataatttaagAGCATGTGCTAAATGCGGTGAGACATGCATCAGTGAGTTTGAACTTAAAGAACATCTGAAGCAGCATTCTAAAGAAGAAATGAAGAAAAAGAAGCGGAGAATGAAATGCGAAGAATGCAACCTAACATTCAGCATAGCGCGATCATACTCATTGCATTACCAGCGTGAACATTTACGATTGAAAGATGTGTTGCCGGCGGGACGCGCGCCCGTCGTCTGCGAGATATGTGGCAAGAAATGCACgACGAACACATCTCTCCGTTTCCACCAAAGGATCCACACGGGCGAACGGCCGTATCAGTGCACAGAGTGTCCCAAGACTTTCAGCGTGGCCCAGAGACTGCAGATACACCAGCGAACGCACAGCGGCGAGAGGCCTTATCCGTGTCCTCACTGCCCCAAAGCGTTTAAAGGGAAACCGAATCTCAACCGACATGTTCGCGTACACACGGGGGCGAAGCCCTACGCGTGCTCGCACTGCGGCAAGTCGTTCTCGCAGTCCAACTCCATGAAGGTGCACATCCGCACCGTGCACCTAAAACTACCCGCACGATCAGGACTTGACTCGCACGAATTACTTTAA
Protein Sequence: MDYILSLRKQSPFTFSIKNNETITCDVDTENEDHSEIAEQIIKEEREYGFDDGDDYKVKSESSDDEPLPRLIKTRLSVERSIRKPKVSKKPKQILKKIIKKKVEIKKVEDKEKKLKKHEEEKSQMETDDIPKGEVDVVMLTKEEQLQEVLSRKTSMNYLSSFYKCELCFKGFISEGTYKNHMARHDPSAGAHECDVCHIRLQDGRALRGHLAKIHEWNYVCKLCKHISKSKHLAKLHSKWHSGHTFVCKFCGMLFTKKTSHLSHVRIHHPSENVNCDVCGEAFIGEHGLKMHKQKAHRDIKKSIEPVSDNRCENCKVQFQNAEAFKRHTSGNEDGLCHNNLRACAKCGETCISEFELKEHLKQHSKEEMKKKKRRMKCEECNLTFSIARSYSLHYQREHLRLKDVLPAGRAPVVCEICGKKCTTNTSLRFHQRIHTGERPYQCTECPKTFSVAQRLQIHQRTHSGERPYPCPHCPKAFKGKPNLNRHVRVHTGAKPYACSHCGKSFSQSNSMKVHIRTVHLKLPARSGLDSHELL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01279565;
90% Identity: iTF_01279565;
80% Identity: -