Basic Information

Insect: Pyrausta purpuralis
Gene Symbol: -
Assembly: GCA_963924145.1
Location: OZ001648.1:11411066-11418159[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.2e-05 0.0037 19.5 2.1 1 23 472 494 472 494 0.99

2 8 1.4e-06 0.00023 23.3 1.3 1 23 500 522 500 522 0.98

3 8 9e-06 0.0015 20.7 0.6 2 23 531 552 531 552 0.98

4 8 9.2e-06 0.0016 20.7 0.8 1 23 558 580 558 580 0.99

5 8 1.1e-07 1.8e-05 26.8 2.1 1 23 586 608 586 608 0.98

6 8 6.4e-07 0.00011 24.3 1.3 1 23 614 636 614 636 0.97

7 8 0.00011 0.018 17.3 7.3 1 23 642 664 642 664 0.97

8 8 0.00017 0.029 16.7 0.8 1 22 670 691 670 691 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.2e-05	0.0037	19.5	2.1	1	23	472	494	472	494	0.99
2	8	1.4e-06	0.00023	23.3	1.3	1	23	500	522	500	522	0.98
3	8	9e-06	0.0015	20.7	0.6	2	23	531	552	531	552	0.98
4	8	9.2e-06	0.0016	20.7	0.8	1	23	558	580	558	580	0.99
5	8	1.1e-07	1.8e-05	26.8	2.1	1	23	586	608	586	608	0.98
6	8	6.4e-07	0.00011	24.3	1.3	1	23	614	636	614	636	0.97
7	8	0.00011	0.018	17.3	7.3	1	23	642	664	642	664	0.97
8	8	0.00017	0.029	16.7	0.8	1	22	670	691	670	691	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTGTCGAGGGAAGAGTGGTGTGACGTGCATCTGTCGTGCGGCGGCCGCATCTTCAGCGCACATCGAGCTGTTTTGGCTAGCGTCAGCCTTTTTCTGAGGCGAGTGCTGCTGTCGTGCCCACAAGAAGAAACACCGATATTCATAGTCTTGCCTGAATTTGATCTAGACGCTTTATCGTCAGTTCTTTACTATGTTTATAATGGAGAAGTTATCATCAAGAAGCAAAGTCTGCATAATTTTTTAGATGTATTGAAAACCTTACAGATTTACATCGACCAGAAATTCTTACAAGAAATTCGTGATAGTATCGGAGATCAAAATTTGGATTTATGTACATATCGTGAAACGAAGTGGAGCAAGAGTATATTTAACTTATGGGTTGGAAAAAGTGATGGACACGAGTATGTAAATATAAGGAAAGGAGAGAAGCTACAGGATCTACGATTACGATATTCGCAAAGTGTTTCAGATCTCGGTGATATACGAAATTGTCTGAGTTGGAGTGACGCTCAGCCTTCTATAGACAATCCACCAGTGCCGCATAGAGACCGACAAAAGAAGTCTTTGCTACGTGATTTATATATCGAGACATATCCTCAGAACGGTAATGTTAACGGTCAGACTGGAGGCGTGCTAGCAATACGAAATGAACGCTATCGTGCCTCGACATCTGTTCTCCTGACGAATGCAAATGGCGATCTTCTTAGCAGAGCTGACGACACGCTCTCAGAGATATCTAGAAAAACAACTGAGCCCacatcctacctacctaatgtcAACCACACGCTATTGCCTCGGATACAAGATTGCACGCAACAACCTAGTGGCACATGTTCAAGACTAATTTACGACACTGGGCTTCTTAAAAAAGAGGAATTGGTCAAAAGACAGATGCTCAAAGATAACGATTCAACTTATGATTTGAAGAATACCTGGCTGAGTTGTTATCCTCCTCAATTAAGTGCCCAACAATATCCTGAAGGAGTTCAACAAAACAATCATCTGATGTCCAAAATATTCACGCCTTATCTAGATCTTACTAAGACTCTACCACTATTGGAACATTCACAGAAAAGTGTGTCAGATCcatttataaacaaacaatttattAGGCGAACTGTATGTAAAAATTCAGTGGAAAATGAAGGTTCTATTAGTAACAAACCATTGAGAGGGCCAATTTTTAACCAAGTTCTGAATAGCCCATGGTGCTCTAAGTTCCCATACGATTTTAAGCCATTCCGACGAAAAGCTACCAATACATTGGATAgctcttttaacaaaaataagGGAAATGAAGTAGCTACTCTGAacgatagtaataataatattgaagaAAAATTGATGCAAGATGGTTATACGCAGAAGGAAGAAAATATGACGGTCCTAGCGAGATATCAGTTTAAATGCAACTTTTGTAGTCAGGTATTTACAACCTCTGAAAGTCTGGAGGAGCACACGAAACGGCATGCTTCGACCGCGCGATACTCCTGCGCAGAGTGCGGTAAAACGTTCTCCCAATTGCGCAACTTCAAATACCACATGTCCGTCCACCGCGGTACTAGGGAGTTTGCCGCCACATGCACGGTTTGCGGGAAATACTTCAACGATAGAGGCTACCTTAGCAGTCACATGAAGATACACAGaaatcgCAAGGAATACAAATGCTCTCAATGTCCAAAGTCATTCAACCAGCGCGTTGCATACAACATGCATGTCCGGATCCACACTGGAGTAAAGCCCCACGTATGCGAAGAATGTGGAAAGGCGTTTTCCCGTAAGATGCTTTTGAAGCAGCACCAAAGGACGCATTCAGGAGAGAGGCCGTACGCTTGCCCGCATTGTGACAAACGCTTCGCAGATAGATCTAATATGACTCTACATCTTAGACTGCACACTGGAATAAAACCCTTCTCCTGCACGCTTTGTCCGAAGTCGTTCACGAAGAAGCACCATCTAAAATCGCACCTGAATTTCCACACGGGCGCGAAGCCGTATTCGTGTCCGCGCTGCCGGCTCGCCTTTACGCAGTCTTCTAACATGCGCACTCACCTGAAGAAATGCGCCGTGCCCGCCTCGAGCCCGGATGAAAATAGTGCCTTACTAGCAAGTGCGCCAAGTACTAATGAATAA
Protein Sequence: MCEWLSREEWCDVHLSCGGRIFSAHRAVLASVSLFLRRVLLSCPQEETPIFIVLPEFDLDALSSVLYYVYNGEVIIKKQSLHNFLDVLKTLQIYIDQKFLQEIRDSIGDQNLDLCTYRETKWSKSIFNLWVGKSDGHEYVNIRKGEKLQDLRLRYSQSVSDLGDIRNCLSWSDAQPSIDNPPVPHRDRQKKSLLRDLYIETYPQNGNVNGQTGGVLAIRNERYRASTSVLLTNANGDLLSRADDTLSEISRKTTEPTSYLPNVNHTLLPRIQDCTQQPSGTCSRLIYDTGLLKKEELVKRQMLKDNDSTYDLKNTWLSCYPPQLSAQQYPEGVQQNNHLMSKIFTPYLDLTKTLPLLEHSQKSVSDPFINKQFIRRTVCKNSVENEGSISNKPLRGPIFNQVLNSPWCSKFPYDFKPFRRKATNTLDSSFNKNKGNEVATLNDSNNNIEEKLMQDGYTQKEENMTVLARYQFKCNFCSQVFTTSESLEEHTKRHASTARYSCAECGKTFSQLRNFKYHMSVHRGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCSQCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACPHCDKRFADRSNMTLHLRLHTGIKPFSCTLCPKSFTKKHHLKSHLNFHTGAKPYSCPRCRLAFTQSSNMRTHLKKCAVPASSPDENSALLASAPSTNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01282531;
90% Identity: iTF_01282531;
80% Identity: iTF_01282531;