Ppur017567.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- ZFX_1
- Assembly
- GCA_963924145.1
- Location
- OZ001646.1:29867413-29871951[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0017 0.29 13.5 0.8 1 23 315 337 315 337 0.97 2 15 0.93 1.6e+02 4.9 0.2 6 23 349 367 349 367 0.95 3 15 0.34 58 6.3 0.6 2 23 378 400 378 400 0.95 4 15 6.6e-07 0.00011 24.3 0.6 2 23 428 449 428 449 0.97 5 15 5.3e-06 0.00091 21.4 1.4 1 23 457 480 457 480 0.96 6 15 0.035 5.9 9.4 0.0 2 23 487 508 486 508 0.95 7 15 3.2e-05 0.0054 19.0 3.5 1 23 514 536 514 536 0.98 8 15 0.0017 0.29 13.5 8.5 1 23 542 564 542 564 0.97 9 15 0.17 29 7.2 2.3 1 23 691 713 691 713 0.91 10 15 0.0016 0.27 13.6 2.9 2 23 720 742 719 742 0.92 11 15 2.7e-05 0.0046 19.2 1.9 1 23 748 770 748 770 0.96 12 15 2.1e-06 0.00036 22.7 5.2 1 23 776 798 776 798 0.98 13 15 0.00045 0.076 15.4 0.3 1 23 804 826 804 826 0.97 14 15 4.4e-05 0.0075 18.5 3.1 1 23 832 854 832 854 0.96 15 15 0.0012 0.21 14.0 2.6 1 23 860 883 860 883 0.95
Sequence Information
- Coding Sequence
- ATGAACAACGAAACTGAACAAATATTTCTGCTGAATCCAACTGAACGCCAACCATCTACAGCGTCTCAAAAAACAGAGGAGAACACTGTTGCATCGCAAGaTGTGGAAGACTTCTCTACAGTATGCCGGACTTGTGCCACGGTCACGGAGTTTGTCATCCCTATATTCGATGGTGAAGGGCTCCAGAATAACTTGGCCGAAAAAattcacaaacatttgcccattCAGGTATCAGAGACGGATATCCTACCCCGAGTGGTGTGCTACCAGTGCGCCAGCACCCTTCTTGCGTGGCATGAGTTAGTACAGTGCTGTGTGCAGGCTGACTCTGCTCTTCGACAAAGGCTGGCAGTCGCTGCAGCTACTGACATAGCCAGGACTAAAGAATTATCTgaTCCTAAAACCAGCAGCAAAGAAATTGTACAAAACACAGAACAGGACCAAAACAAATCAAACCTCAAATTGTACactgtattgaaaaatgaattAGTCAGTAACTACCCTTTTATGGTAAATGGAGATAGCTTAGAAAACCAGATTGCTTGCCTGCAATGCAAGAACTGTCCTCCATCAAGTACCATTACACAGGTCGCCCATCATCTTCAGTCTGCCCACCATTTCAAGACAGCAAACCCAGTAgcaataaaaaactttattgcgaACTTCATGACATTCGAGGAAACATTGATGTCTGAAGATTCTGATATAGATTATGAATCTGCCTGCAGTGAAAAATCTAAAATGttacaaaaaacaaatattgagTCTGCCTTTGGTGGTCCTGAAGTCTTACCCAATAGAGATAATGAATCTGACTATGATGAAAAAGCTGAAAGATTACGCAATAAAGATCTTGAATCTGACAGTGATTCTGAACCTGACAGTTCATCCATAAGAGATGTTGATCCTGACTCTAATGAAAAACCTTTAAAGTTATCCAATTTTTATTGCCCATATTGTAAAAGCATATTTTCATCTATATCACGACTCATTAACCATCTCAACCAACACTTGGATCTATCCAGAGCAGACGGAGCGATATGCTGCGAAACCGTATTCAATTCAAAGAAATTGTTCGCGATCCATTTGCAAGAGAGCCACGTCACTAGGGTCGAAGGCGAATCCAACAATACCTGTAAAACTTGTCGCTTCCAAACGAACACCCTGGGGGAACTTCAAGACCATGTTTTAAAAgctcataataatataacaaaagaaataaatatggaATCTGAAAGAGAAACTAAGCAAAGAGATAAGAATCAAAAATACATTCCAGCAGTGTGTCcagaatgtaacaaaatattttccaataaatataatatgttcgCTCACATGAAGAGTCACACGGGCAATGTGGGGCCGAAGTACCGGTGTGACCAGTGCGACAAAGTGTACAGCAGCCGGGGAAACTTAAACAACCACAAAAAATTAACACATGCTGGCATCTTAAACCAAGTATGCACCACTTGTGGCGAGGCGTTCCCTTCGAAGGTAGCGCGCGACGTCCACGCGCGGATCCACACGGGAGAGACACCCTACCAGTGTGAGCACTGCAAAAAGTCCTTCCGGGCCAAGAACACTCTCGACAGACACATGGACATGCATCTAGACGTAAGAAGACACGCGTGCCACCTCTGTCCGAAGAAGTACAGAAAGAGAACGCACCTCAATTACCACCTAAGAACGCACGAGAGAGACGCCAACACTTGCGATTCGCAATACAATAACGAAGAGAACGACGGCGACGAATCTAACAAAGAAGACGATGAGCCCCTCGCCAATTTAGCCAGCAAAAAAACAACAGACTTGTATAAAAATTTCTACCACGCTCTCGTAAAATTTAGAAATCATTTCGCAAACGCGCACTCATCACACGAACCACAACGTTCAGCAGACTCGGCGTCGAGCGATTCCGAGATCGCGAGCGACGAAGAAAAAGAGACAGACGAATTCAACATAGAAAACTACGACGACCTAACAGACTGCAATATGAGAAAAGACCGAATGGACGAGCAAACGAGACTGGAACTGAGTCGGGTGCGGACAAAAATAAACGGGAAAGTGTTTTACACGTGTCAGGTCTGCGGGAAGAATTTGAGTTCGTCGCACACGTACGTGTTCCACAACCGGATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGCGCGCCCGGCGGGCTGCACCGGCACCTCTCCGAGACGCACGAGCGCATGCGCCGCCACGCCTGCTCGCTCTGCCTCAAGAACTTCGCCAACTCGCAGAATTTGAAACAGCATATGAGAATCCACACCGGTGAAAGACCCTTCGTGTGCACGCACTGCGGGAAGCGATTCACGCAGAGCGGCACTCTGCACGTCCACCAGAAGACGCATACGGAGCAGTTCCCGTATCAGTGCGCGGAGTGCGGGGCCAAGTTCAGATTGCGCTCGGGACTGGTCAGACACAACTTGAAGCACACGGGGGAGAGGCCGCACGTGTGCGTTTACTGCGGGAAGAGCTTCCGGCAGAGGCACGAACTGGCGAACCACAGTCTGTCCCACACCGACGCCAAGCCGCACTCTTGTCTGATATGCGGCGCCGCCTTTAGACAACGTAGAGCGCTCCGACACCACAACAAGCGAGTCCACGAAGTCGACGTTCCTCCTAACCATTCCCTAATTTATACGCACGTTAcaaattattag
- Protein Sequence
- MNNETEQIFLLNPTERQPSTASQKTEENTVASQDVEDFSTVCRTCATVTEFVIPIFDGEGLQNNLAEKIHKHLPIQVSETDILPRVVCYQCASTLLAWHELVQCCVQADSALRQRLAVAAATDIARTKELSDPKTSSKEIVQNTEQDQNKSNLKLYTVLKNELVSNYPFMVNGDSLENQIACLQCKNCPPSSTITQVAHHLQSAHHFKTANPVAIKNFIANFMTFEETLMSEDSDIDYESACSEKSKMLQKTNIESAFGGPEVLPNRDNESDYDEKAERLRNKDLESDSDSEPDSSSIRDVDPDSNEKPLKLSNFYCPYCKSIFSSISRLINHLNQHLDLSRADGAICCETVFNSKKLFAIHLQESHVTRVEGESNNTCKTCRFQTNTLGELQDHVLKAHNNITKEINMESERETKQRDKNQKYIPAVCPECNKIFSNKYNMFAHMKSHTGNVGPKYRCDQCDKVYSSRGNLNNHKKLTHAGILNQVCTTCGEAFPSKVARDVHARIHTGETPYQCEHCKKSFRAKNTLDRHMDMHLDVRRHACHLCPKKYRKRTHLNYHLRTHERDANTCDSQYNNEENDGDESNKEDDEPLANLASKKTTDLYKNFYHALVKFRNHFANAHSSHEPQRSADSASSDSEIASDEEKETDEFNIENYDDLTDCNMRKDRMDEQTRLELSRVRTKINGKVFYTCQVCGKNLSSSHTYVFHNRIHTGERPCVCHVCGKQFRAPGGLHRHLSETHERMRRHACSLCLKNFANSQNLKQHMRIHTGERPFVCTHCGKRFTQSGTLHVHQKTHTEQFPYQCAECGAKFRLRSGLVRHNLKHTGERPHVCVYCGKSFRQRHELANHSLSHTDAKPHSCLICGAAFRQRRALRHHNKRVHEVDVPPNHSLIYTHVTNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -