Ppur062308.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001672.1:9771879-9776990[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.05 8.4 8.9 0.3 2 23 10 32 9 32 0.90 2 28 0.00012 0.02 17.2 0.3 1 22 37 58 37 61 0.91 3 28 0.32 55 6.3 0.0 3 23 156 177 154 177 0.95 4 28 0.018 3.1 10.3 0.2 1 23 198 220 198 220 0.94 5 28 0.0018 0.31 13.4 1.7 1 23 277 300 277 300 0.96 6 28 3.3 5.6e+02 3.2 1.8 1 23 373 396 373 396 0.94 7 28 0.004 0.68 12.4 1.4 3 23 403 424 402 424 0.91 8 28 0.0008 0.14 14.6 2.1 1 22 429 450 429 452 0.89 9 28 0.004 0.68 12.4 0.4 2 23 458 480 458 480 0.91 10 28 0.00023 0.039 16.3 4.7 1 23 484 507 484 507 0.97 11 28 0.0018 0.31 13.4 0.5 2 23 514 535 513 535 0.96 12 28 0.028 4.8 9.7 1.9 1 23 541 563 541 563 0.96 13 28 0.0067 1.1 11.6 3.0 1 23 604 626 604 626 0.98 14 28 0.023 4 9.9 1.2 2 23 654 676 653 676 0.95 15 28 0.0019 0.32 13.4 0.1 2 23 697 719 696 719 0.95 16 28 1.6e-05 0.0027 19.9 0.5 1 23 724 747 724 747 0.97 17 28 0.28 48 6.6 0.4 1 23 752 776 752 776 0.94 18 28 0.00053 0.09 15.1 0.7 2 23 779 801 779 801 0.94 19 28 2.2 3.8e+02 3.7 2.4 2 20 808 826 807 828 0.91 20 28 0.0033 0.56 12.6 1.8 1 23 881 904 881 904 0.95 21 28 9.6 1.6e+03 1.7 0.0 3 23 933 954 932 954 0.93 22 28 0.00044 0.074 15.4 0.7 2 23 977 1000 976 1000 0.96 23 28 1.7e-05 0.0028 19.8 0.5 3 23 1007 1028 1006 1028 0.94 24 28 0.00018 0.031 16.6 0.8 2 23 1033 1055 1032 1055 0.95 25 28 0.00034 0.058 15.7 0.8 1 23 1060 1083 1060 1083 0.97 26 28 1.8e-05 0.0031 19.7 6.3 1 23 1087 1110 1087 1110 0.97 27 28 0.00083 0.14 14.5 0.4 2 23 1117 1138 1116 1138 0.96 28 28 0.00064 0.11 14.9 1.9 1 23 1144 1166 1144 1166 0.98
Sequence Information
- Coding Sequence
- ATGCGCAAATACAATTTATCGAAATCCAAGTGTCCGGAATGTTCGGAGAGTTTTCTCTACTCGTCGTTCCTCATCAAACACGTAGATGAAACTCATGAAGTGAACTGTTATACGTGTGACGTTTGTAACAAATACTTCAACTCGGAGGATTATCTAGAACAACATATAATTAAAGAGGGTCACAAGCAAGGCATCATCAATGATAAAATGAAGTTTATGAGCACTGATAGTAAAATTAAACATGTAAATACTGTTGAAACTATTAATCACATAAATACTATTGTAAACATGTCGAATGCTACTCCTTTGCACGGGTATCAAGTAATGAGCAAATTTGTTTGCTTCAGTTGCTCGCATTTATTTGCGGCGTTTGCAGATCTTCGAGATCATCACGCTAAAGCACATAGTACGTTTTCACTGTCGCACGGGACTATGCCGGTGACTTTAGACACTTCCGAACTCGCTTGCCGTGAATGCTCTGAAAGTGTAAATGATATACAAGCTTTAATATACCATTTGAGAGTGATACACGATTTGGAAGTTAACAATGAAGTCCTAGCTAATATTAGACAAGTCGAAGTAGGGGAATCGTTTTTGTGTCGAGAGTGCAACGCTTCATTCGATAGCTATGAATTTCTATGGGAGCACATGGAAGAACACAAGCTTTGTCCCATTGTGCTATGCCCCCATTGCGGACTAGGTGCATCTGAAGACATTCAAACTATTGCAGACGATAAAAAGCCTACAGCTGTAGTTCAAATAAGGAATAATATCGCTTGTATCATGAACATGTCAACCGCTATACCTTTTAAGTTTTTCATGAACAACTTTAGGtgtttttattgtgttaaaGATTTTAGCGATTGCGATGCTTTGAAGGAACACACGGCTATGGAACACCCGGTCTGTGATGTGAAACTCAAATGTTTGAGGCTTAAGAACAGACTTTCGGGTATTAGAGTGAAAGTTGATATCTCGACGCTGTCGTGTAAAGTCTGTTATCAGCCCATGCCAGACCTGGAATGTTTAATTGACCACTTGATAGCAGAACACAAGGCGACGTACGATAAAACAGTAGATCATCTACTCGAGCCATTTAAACTGATCAAAGACAATTTCCCGTGTCCATTTTGCACTGACATCTACACTTATTTCTGTACGCTCTTGAAGCATATAAGCGAAAGCCACTCTGAGAATAGAGCTATTTGTCCTTTCTGCGGAGTCACATTTAGGACGGAATCCAATTTGAGGTTCCATATTTCTCACAGGCACAACACTGGTAGTCACAAGTGCAGCGTTTGTGACGTGAGTTTTCCTACTAAACGACATCTTCGAGAGCATTCCGGTTCGGCCCATGGTAATAAAGTGGCGAAATGCTCGGAATGTTCAGAGAAATTCAAGTCTCCGTATGCAGTACAAAGGCACAAAATCGATGTGCACGGCATAGGACATAAGTGTACCTACTGCGGAAGAATGTTTACTAAGAAATCCTTCATGATGGACCACGTCAGGCGGTCGCATCTCAAAGAAAAGAACGTGGAGTGCCCCGTCTGTTTCCAAAGGTTCTTCAACAAATACATGGTCACCAAACATATGGTTATGCACGTCGGAGAACGGAATTTCCATTGTGACATTTGCGGAAAAAAGTTTCTGTGGAAGAAGAATCTTATCGGACACATCAAGAAACATTTCTTTTCAGATGAAAACGCTCCGGCTCCTTACGAAGGGTGCGCCTCTGAGCGTCGACGGAAAAACTTGAAAGTACTATTCAACAACACTACGATCATACCCTTTAAGTGGAGACGACGCTTTCAGTGCTTCTACTGTCCCGAATACTACACGGAATATGATGAGTTCAAAAAGCATACCAAATCCCACGGTCCGTGTAGTACAAAAGATAACGCGTTGAGAACGATTAAGGGTAGTCACGTTGAAATCAAAATAGACGTCTCGGATATAACGTGCGAAATATGCAATGAATCTTTTACAGAATGCCATGAGATTATCGACCATTTGATCATGAAACATAAATTGGACTTCGATAAGTCAGTTGATATACCCCTACAGGCTTACAGATTAGCGGACATGAAATGCTTGTTGTGCGGGGAAACTTTCACATATTTTGGATATTTGATCAGTCATGTGAATATTCTTCATCCGCAAAATTGCTACATATGCGATGACTGCGGATTGACGTTCAACAAGAAACGCGATTTAGCGGTACATTATAGATCGTACCATCGGAAAGGCGGCTACCCTTGTGAGAAGTGCCCACCACTTGTTTTTGACAATATCTGCTCCTTGCGTCGACATCAAGATAACGTTCACTATAGGAAATGTTCTAGTTGCAACCAAAAGTTTACAACACTAGGTTTGTTGAAGAGACATATATTAGCCGAACATCCGGATACTAGCACTTTGACATGTAAGCACTGCGCCAAAGTCTGTCAATCGTTGCAAGGATTGCAACTTCACAAAAGCAAATGTAGGGTCACAATGCTCTCCAACAACGATAACGTAGACGCATCTCTTTCTGGCAATACCGATCCGAAAAAGAAGCAGAACACACAACAGATCAGAGAAAACATACATTGCGTTCTAAACATGTCCACGGCGGTACCTTTTAAATTCTTCGCAAAGTTCTCCTGTTTTTACTGTTCTAAGAAATTCGTAGAATTCGACGATCTTAAAACCCATACTGAGTCTGAGCACCCGGTCTGCGATATGAAATGTAAACCTATGAAAAAATGCCGAGGTGAAAGGACTAGTGTCAAAATAAGTATCGCGTCTTTGTTATGTAAACTTTGCGGCTTACCTATGGAAAAATTGGAATTGCTAATAGACCATTTGATTGTCGAACACAAAGCTAATTACGATAAATCAATTGTGGGTTGTCTTGAGCCTTTTAGAATAGTTAAAGATAACATACCCTGCCCCCATTGCCCTGACCGTACGTTTAGATATTTTGGAAACTTGCAACGGCATTTGAACACTGatcatagtaacaataataaaatttgcgATTTTTGCGGTCGAACGTTCAAAAACGCTACCAACCTCAAAGTTCACATATCCTACTCGCACACTGGTTCTGTGGAATGCGAcatttgtggcatcaagtttaAGAACCAGTGGTGTCTCGCAAGGCACCGCGCTAAGTCCCATGACGCTAAAGATTATAAATGTCCTAAGTGTCCCGAGTTATTTCGCTCTCAGTACGATAAACAGAAGCATTTGATAAGAGTGCACGATACAGGGCACAAGTGTGAACATTGTGGAAAGATGTTCACAAGAAATTCGTTCATGAAAGACCATATACGGAGAACTCATTTGAAGGAGAAGAATGTGCCTTGCACTCTATGTAACGAAAAGTTTTTCGACAATTATCTATTGAGGATGCATATGGTGAAACACGAAGGGGAGAGGAAATTTTCGTGTACCGCATGCGGAAAAGCGTTTTTAAGGAAAACTAATCTCCATTCGcatatggaaatgcataagaaGTATGGCCATGTCGGTCTTATGCAGGATATGAATCAATAG
- Protein Sequence
- MRKYNLSKSKCPECSESFLYSSFLIKHVDETHEVNCYTCDVCNKYFNSEDYLEQHIIKEGHKQGIINDKMKFMSTDSKIKHVNTVETINHINTIVNMSNATPLHGYQVMSKFVCFSCSHLFAAFADLRDHHAKAHSTFSLSHGTMPVTLDTSELACRECSESVNDIQALIYHLRVIHDLEVNNEVLANIRQVEVGESFLCRECNASFDSYEFLWEHMEEHKLCPIVLCPHCGLGASEDIQTIADDKKPTAVVQIRNNIACIMNMSTAIPFKFFMNNFRCFYCVKDFSDCDALKEHTAMEHPVCDVKLKCLRLKNRLSGIRVKVDISTLSCKVCYQPMPDLECLIDHLIAEHKATYDKTVDHLLEPFKLIKDNFPCPFCTDIYTYFCTLLKHISESHSENRAICPFCGVTFRTESNLRFHISHRHNTGSHKCSVCDVSFPTKRHLREHSGSAHGNKVAKCSECSEKFKSPYAVQRHKIDVHGIGHKCTYCGRMFTKKSFMMDHVRRSHLKEKNVECPVCFQRFFNKYMVTKHMVMHVGERNFHCDICGKKFLWKKNLIGHIKKHFFSDENAPAPYEGCASERRRKNLKVLFNNTTIIPFKWRRRFQCFYCPEYYTEYDEFKKHTKSHGPCSTKDNALRTIKGSHVEIKIDVSDITCEICNESFTECHEIIDHLIMKHKLDFDKSVDIPLQAYRLADMKCLLCGETFTYFGYLISHVNILHPQNCYICDDCGLTFNKKRDLAVHYRSYHRKGGYPCEKCPPLVFDNICSLRRHQDNVHYRKCSSCNQKFTTLGLLKRHILAEHPDTSTLTCKHCAKVCQSLQGLQLHKSKCRVTMLSNNDNVDASLSGNTDPKKKQNTQQIRENIHCVLNMSTAVPFKFFAKFSCFYCSKKFVEFDDLKTHTESEHPVCDMKCKPMKKCRGERTSVKISIASLLCKLCGLPMEKLELLIDHLIVEHKANYDKSIVGCLEPFRIVKDNIPCPHCPDRTFRYFGNLQRHLNTDHSNNNKICDFCGRTFKNATNLKVHISYSHTGSVECDICGIKFKNQWCLARHRAKSHDAKDYKCPKCPELFRSQYDKQKHLIRVHDTGHKCEHCGKMFTRNSFMKDHIRRTHLKEKNVPCTLCNEKFFDNYLLRMHMVKHEGERKFSCTACGKAFLRKTNLHSHMEMHKKYGHVGLMQDMNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -