Ppur030952.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001653.1:4723034-4723432[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-07 0.00016 23.2 0.0 2 33 12 43 11 51 0.88
Sequence Information
- Coding Sequence
- atGGCAAAACGAGGGGAATACTATGCGTGGGACAAAGAAAGTATGACATTGGCACTACAAGCTTTAAGTAAACAAGAAGTTGGACTAAATGAGGCAAGTAGGATATATGATGTACCAAAAGCAATGCTAAAAAGAAAGCTGGAGTACAAAAATTTAAGAGCAAAAGGTGCAAAACAAATAATTGGTTCTACAGGTGACCTTACTACTGACTTAGAGAAAAAGTTAGTCGATCATATTTTGGAGTTGGAAAGCTGTTTAGACGGAATCACGCCAAAAGATGTCAGAACCTTAGCTTACAAAATAGCTGAGAAAAATGGCTTAAAGCACAAATTCAACCAAGAAATGGCTGGAAAAAAATGGTACTATGGATTTTTAAAACGACATCCAGATAAAGTCTAA
- Protein Sequence
- MAKRGEYYAWDKESMTLALQALSKQEVGLNEASRIYDVPKAMLKRKLEYKNLRAKGAKQIIGSTGDLTTDLEKKLVDHILELESCLDGITPKDVRTLAYKIAEKNGLKHKFNQEMAGKKWYYGFLKRHPDKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01282194;
- 90% Identity
- iTF_01282194; iTF_01282192; iTF_01282193; iTF_01282195;
- 80% Identity
- -