Ppur010287.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001643.1:26754584-26759671[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-11 5.9e-08 34.2 0.0 4 37 79 112 76 117 0.93 2 2 4.7 3.8e+03 -0.4 0.0 7 19 120 132 119 133 0.79
Sequence Information
- Coding Sequence
- ATGGTCATCGCTGACGGTTACACCTTATACCGTCTCCGGGAACAGGCGGCCTCGGATTATTTCGTCTGCACCAGCGGGACCAGTTGCCATTCCCGGCTGAGTACGTCCAAGTCGGGGGAAGGGGTCAGGGCCATGCTGAACCATAACCATAAGCGGCCAGTGTTCTTTGTTAAAGATGattACTTGGCGATCGTTATGGAAAACCCCAGAAAAAGACGGACTTGGGATCAGAACAAAATGATTGAAGCGATAAAAGCGCTGCGAGAAAAGAAGATGGGCCTGAAACGAGCGGTGAAATTGTACTCTGTTCCAAAATCGACGCTAAGGAGATTTGTGCACAGCGACTTGACTCCTGAAGAAGCCGTCGAAAAATGTTTGTCCCGAAAGCTTACAACGAAGCTTACTTATGAAATGGAAACAAATCAAGTATATTTAACACCAGAGCCTTGGAATGAGGACTCTGACTCCGAGTGA
- Protein Sequence
- MVIADGYTLYRLREQAASDYFVCTSGTSCHSRLSTSKSGEGVRAMLNHNHKRPVFFVKDDYLAIVMENPRKRRTWDQNKMIEAIKALREKKMGLKRAVKLYSVPKSTLRRFVHSDLTPEEAVEKCLSRKLTTKLTYEMETNQVYLTPEPWNEDSDSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -