Basic Information

Gene Symbol
-
Assembly
GCA_963924145.1
Location
OZ001660.1:25717658-25719207[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.007 34 6.8 0.0 47 85 88 126 75 128 0.78
2 3 0.0074 36 6.7 0.1 50 83 187 219 175 221 0.85
3 3 0.00046 2.3 10.6 0.0 51 83 286 317 264 319 0.86

Sequence Information

Coding Sequence
ATGGACATAAATAATCTACAAAACCAAAGTTACTGGTTGGTGGTGCGTGAAGATCAAAAAAACAGTGCATATAACTTTGCTATACAACACCCTTCTCTAGCTGCCGACGAGACGAGATATATTGTTGATGCAGATCACGGACCATATAACGAAGTGACTGTCCAAAATACTGATCAAGATGTATCAAAATCACGAGGAGATAACTTTTGGGATCGCAACAAAATTAGATTATTACTGACACTTTGCCGTGATGATAAATTCAAGAATGCAAAGAGAGACAAATCACTGTGGAATGAAATAGCCAATCTGGTGGGAGTTAACGCTGAGGAGTGcagtaaaaagtataaaaacctCCAAAGAACATATATTAGGTTAATGAGAAAGAAAAGACTAGGGAAGGATGTCAAATGGGTCCATTTCAACTTTTGTGAAGAAGTTTTTAAAGGCTGCGATATTATGCCACCTGCTGTCCTAGAGCCCTGGGAAGACAGTAAAATCAGGCGCCTTTTAAACCTCTACATTGAGAACCTCACATATAAGTTCAGAAACCCTAAGTACCAAAAAAAGGAACTTTGGAAGGAAATTTCTACAGTTGTTGGGGTCCCCCCTGAAAAGTGTGATAAAAAATTCAGGAATTTGAAACAAACATATGCcagattaaaaatgaaagcccGAACTGGAAAATGCACAACAAGATGGAGGTACTACAAGGATTTTGATACAATTTACAGCAAGACCTATCCCTCTAATGAAGAAGATGAAGATGAAGTTGCTTCTGAGAGGTATGACTATGTAGAAGAATTGTTAAAATTCTACATAGATAATAAGGAGAAGTTTTGTGATCCTTTTGGAAAGAAGAAGAATCTTTGGAAGATTATTGCCACGAAGCTGGGACTATCTGCACAACAGTGCGACAAAAAGtttcgaaatttaaaacaaacatacTTTAGACTCCGAGAAAGAAAGTTGGCAAATGGTAAGTGCAGCAGATGGCCTTATTATTCAATGTTTGAAAAGATTTATGGTGAAGACAAACCAGTCTGTCAAACAAATCAAATGCCTGTATCTGAATTCAAAAGAGTTTTGAGAGATGTGCAAGAGAAATCAGACAGAGGGAAGTTTGAAAGACTTTTAGAAGTAGTAGAAGAATCTAATGATATTCAAAGAGAAAGAAATAGAATTCTTCAAGCTTTATTGGAaagaaacttaaatatataa
Protein Sequence
MDINNLQNQSYWLVVREDQKNSAYNFAIQHPSLAADETRYIVDADHGPYNEVTVQNTDQDVSKSRGDNFWDRNKIRLLLTLCRDDKFKNAKRDKSLWNEIANLVGVNAEECSKKYKNLQRTYIRLMRKKRLGKDVKWVHFNFCEEVFKGCDIMPPAVLEPWEDSKIRRLLNLYIENLTYKFRNPKYQKKELWKEISTVVGVPPEKCDKKFRNLKQTYARLKMKARTGKCTTRWRYYKDFDTIYSKTYPSNEEDEDEVASERYDYVEELLKFYIDNKEKFCDPFGKKKNLWKIIATKLGLSAQQCDKKFRNLKQTYFRLRERKLANGKCSRWPYYSMFEKIYGEDKPVCQTNQMPVSEFKRVLRDVQEKSDRGKFERLLEVVEESNDIQRERNRILQALLERNLNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-