Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963924145.1
Location
OZ001649.1:4039539-4041956[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-17 2.9e-14 54.7 9.3 2 52 44 94 44 96 0.97
2 2 0.00016 0.45 12.4 0.6 33 55 89 111 89 116 0.91

Sequence Information

Coding Sequence
ATGAGCACACCGATTATCATCACTGTACCCAACAACTACTTGGCGGTGGATGAGATGGATTCGAAGGTCGTGGTCGACGTTTCATCGCACCCACCGTCAAGGAAGAGACGGCTGGACCATTTAACATGGGAGGAGAAGATGCAAAGGAAGAAACTGAAGAATCGCGTGGCAGCGCAGACGTCACGGGACAGGAAAAAGGCAAAAATGGACGAGATGGAGCATAAGTTATCGCTGTTGGCCGAAGCGAACGAGCGGCTCACGAGCGAGGTGGCGAGTTTGAAGGCGTTGAACGAGCGTTTGTTGAGCGAGAACGCTTCGTTACGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGGGCCCCAGGACCGGCAGAGTCTACTCCTCAGCAGAAGGAGGGGCCCCCAGCGGCGCTCCGCGCGGCGCGCATGCTGCTAGCGATGTGTCTCCTCTCGCAGACATCCTCGCCCACCTCGACTCTGAAGAGTACCTCGATACCCTCAATCAACTTGCAGAGTCCCTCCTCAAAGAAATTGATGCAGGTTCTACAGGAGCGGCTGAAGATGTCTCAAACCGGCTCTCTGGAGAGTGCTCTCAAGCAGCTCAAGTGGTGGGGCCCGCAGCAGAGCACCTGGAATCCGGTGGAAGTGTCGTCGTAG
Protein Sequence
MSTPIIITVPNNYLAVDEMDSKVVVDVSSHPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHKLSLLAEANERLTSEVASLKALNERLLSENASLRSEAAARTVAGAPGPAESTPQQKEGPPAALRAARMLLAMCLLSQTSSPTSTLKSTSIPSINLQSPSSKKLMQVLQERLKMSQTGSLESALKQLKWWGPQQSTWNPVEVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01281040;
80% Identity
-