Pdes008211.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- grn
- Assembly
- GCA_963921415.1
- Location
- OY992849.1:5808713-5809410[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-20 7.4e-17 61.7 4.7 1 35 22 55 22 56 0.98 2 2 2.2 8.3e+03 -2.4 0.1 15 26 76 82 74 88 0.57
Sequence Information
- Coding Sequence
- ATGTTTCTGAATGTGATTTTTCTCTCATCCTCCTCAGCTTGCCAGGAGACAGAGGGCCGGGAGTGCGTGAACTGCGGCGCGACCAGCACCCCCCTGTGGCGGCGCGACGGCACCGGACACTATCTCTGCAACGCCTGCGGACTCTACTACAAGATGAACGGACAGAACCGACCCTTAATCAAGCCTAAACGAAGATTGATAACAGTTGAAGTAGGATCTCGAGACAATCCCAACAAGAATGGGTGTCGTTTACAGTTAAGGGGCAGCAATAAAAAGGCGGAGCATGCACGCCCGCACGACACTCGCTAA
- Protein Sequence
- MFLNVIFLSSSSACQETEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLITVEVGSRDNPNKNGCRLQLRGSNKKAEHARPHDTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -