Basic Information

Insect: Pyrausta despicata
Gene Symbol: -
Assembly: GCA_963921415.1
Location: OY992844.1:12472663-12475575[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-09 5.2e-07 30.3 0.0 1 44 15 57 15 58 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-09	5.2e-07	30.3	0.0	1	44	15	57	15	58	0.94

Sequence Information

Coding Sequence: ATGTCACCTCCTAAGAAGAgcactacaaaaaaaaagaaatacactGAAGAAGCTTTGTCAAATGCGCTTAAAGATATAAGAGAAGGGAAAGGAATTCGAAAAACATGTAGTGCCTACGGCATTCCAAGAACGACAGTACAGGATCGACTTAGTGGAAGAACACAGGAAAAGCCAAGAAAAGTTGGACCCGACCCAATTCTAGGATTTGATGGAGAACAGAAAATTGTGGATTGGATTATAGACTCTGCAAAATGTGGCATACccataaaaaaagaagattTGTTGGACACAGTAGCGGCTATTGTtaaagacttaaaaaaggagCATTGCTTCTCGGGCGGAAAGCCTGGTCAGAAATGGTACCAAGGATTTTTAAGACGACATCCTGAAATTAGTATTCGAGAACCAGAATCTATAAATAAAGCCCGAGAAGCTGTGAAAGAGGTCTCGATTCGGAAATGGTTTACAGATCTGGAGCTGTATTTGATAGAAAATGGATTAACCGATATCATGAATGATCCAGAAAGGATTTTAAACGCAGATGAAACTTGTATATCCTTGTGCCCGAAAACAGGAAAAGTTTTAGCCCCAAAAGGgttcaaaaatgtttatagcGTTAAAAAAGGCAACGAAAAAGAAACACTTACAGTGTTAATTGTTATGACAGCTTCTGGGCAAATATGTCCTCCTTTGGTAGTGTATCCCTATGTGAGGCCACCTAGGGCAGTTGTAGAAGGTACACCAGCGGATTGGTCCATTGGTCGAAGTGAGACTGGGTGGATGAGGAGCGATGTTTTTTACGAATATATTGCAAATGATTTTAACAAATGGTTAACAGCAAAAGACGTCCGAAAACCTGTGATACTTTTCGTTGATGGGCACAAATCGCATATGTCTATGCCTCTTAGCAAATTTTGCGAAGATAACGGCATAATTTTATACGCCCTTCCTCCTAACACTACACATATATTGCAGCCCGCTGACGTGAGTGTCTTTCGACCACTGAAGCAGAATTGGAAGAAAACGGTAAAGAATTGGCAAAACAGACCtgaaaattttaacaaaagcGTCACGAAGACTAACTTCTGTAGAGTTTTTAAAGAAACATTAGATGTGGAAATGACAGAAACTATCAAAAATGGCTTTCGAAAATGCGGTTTATACCCTTTCAACGTAGAAGCAGTCGACTTCACGAAATGCGTGAAAGACGTCCAAATTAAAGTCACTGCTCAACAAAGGCAGTCTGGAAGAGACTTTAcagaaaaacattttgaaattgcTAAAGAAGTGTTCTCGCTTATCAGTGTCAATCTCAGCAAACAAGGCATAGACCCAAGAATTATCGAGAGTGAATTAGAAAAGGCcagaaaaaattacaaacgtTCAAAATCTAAAACACCACGTAATTCAACATCAAAATCTCCGAATACCTCAAAGTCACAAACACCTAATGATTCAGCATCAGATGCACTTCGTAAATCGAAATCACCTCGAAATTCGTCAACTAAATCACCTCGGAATTCGTCAACTAAATCACCTCGGAATTCTTCAGCTAAATCACCTCAGAACTCCACATATAAATTGTCACTCAATTCAAAATCCAAAATGCATCAAACATCTAATCCAATAGTAGAGATTGTTGATAGCTCTGTACCTGAAATCGGATCTTTAATTTCGTTAAATGATGTGTCCATTTTACCGTTTGATGACATTTCGGCATCAGATATAAATTTGTCCACATTTTCGCAAGAGATTTCTTTTTCCAATGCTCCCGAGCCTTCGGCCAGGGGTTCAACTGCCAACACTTCTGCTGAAAATATTGCACAAGTTGAAGAAGGTGTTAACTTAGTTGTAACGTACGCTGACATTCACCCAGTTCCACCAACGGTTAATACTGATGATGCACCAACAATTACTACAGATAACGCTCCAACGATTACTACAGATAACGCTCCAACGATTACTACAGATGACGCACCAATGATTACTACTGATGACGCACAGGTTATACATAAAAGTACTACAGTTGATACTGATCTTGCATGTGAAGACTTCGCCACCGTATGTTCTGTGACTGACACAATATCAACTTTAGAGTTAAAAGAAATGCCATCAAATCCTACTTCAATAACAGAAAATGAAAACGTAACTAGTTCCGATTCGAATTTATATACCGCTGACGTACAGAATTTACATAAAACTACAGAAGTTGATTCCAACGTCAAAGATATTACTGTTAAAGATAACTCTGCCAATGAAAAGATAAATGAAGATAAATCCGACCCATTTCAAAAACATTTGAGATATCATGTAGAAATTAAAGATGCCAAACATAGTTCAAAGCTCGTCTGCCGTGACAGTCCTAAATCTATATCAAGTCAAGCTTGGAGAGATTACTATGAAAAGAAAGATGAAGTAAAAAAAGCAAAGGAAGAAACTATGAGAAAGAGGAAATTGGAAAGAGAAGCTAAAAAAACAGAGAAAGCAGCGAAAAAGAAagatatttgtaacaaaaaagaaGATGCAAAGAATGATAATGTAGGAATTAGTACGAGAAAAAGGAAATTGGAGACAGGAGACAGAAAAACAGAgaagatattaaaaaagaagaaagtaacaaaaaaagataagaaaCAATGTACTCGTAGTCCCGAAATTGAATCTACTAAACAGCCGGAATCACGGCGACTTAAATTGAAGTGCGGCGCTTGTCAAGAGGATCTCAATAGTGACACTGAAGACGAAGGAAGCAAAAACATTGGGTGTGATGATTGTATCAGATGGTACCATTTGAAATGCACagaattaaaatacttaccttaCAGCACTGCAGCTGAAGCTGATTTTACTTGTAATTTCTGCGAAGCTGCGGAATGCGCAAGACGTGCTGTATTGAAAGACTACAATCAGTAG
Protein Sequence: MSPPKKSTTKKKKYTEEALSNALKDIREGKGIRKTCSAYGIPRTTVQDRLSGRTQEKPRKVGPDPILGFDGEQKIVDWIIDSAKCGIPIKKEDLLDTVAAIVKDLKKEHCFSGGKPGQKWYQGFLRRHPEISIREPESINKAREAVKEVSIRKWFTDLELYLIENGLTDIMNDPERILNADETCISLCPKTGKVLAPKGFKNVYSVKKGNEKETLTVLIVMTASGQICPPLVVYPYVRPPRAVVEGTPADWSIGRSETGWMRSDVFYEYIANDFNKWLTAKDVRKPVILFVDGHKSHMSMPLSKFCEDNGIILYALPPNTTHILQPADVSVFRPLKQNWKKTVKNWQNRPENFNKSVTKTNFCRVFKETLDVEMTETIKNGFRKCGLYPFNVEAVDFTKCVKDVQIKVTAQQRQSGRDFTEKHFEIAKEVFSLISVNLSKQGIDPRIIESELEKARKNYKRSKSKTPRNSTSKSPNTSKSQTPNDSASDALRKSKSPRNSSTKSPRNSSTKSPRNSSAKSPQNSTYKLSLNSKSKMHQTSNPIVEIVDSSVPEIGSLISLNDVSILPFDDISASDINLSTFSQEISFSNAPEPSARGSTANTSAENIAQVEEGVNLVVTYADIHPVPPTVNTDDAPTITTDNAPTITTDNAPTITTDDAPMITTDDAQVIHKSTTVDTDLACEDFATVCSVTDTISTLELKEMPSNPTSITENENVTSSDSNLYTADVQNLHKTTEVDSNVKDITVKDNSANEKINEDKSDPFQKHLRYHVEIKDAKHSSKLVCRDSPKSISSQAWRDYYEKKDEVKKAKEETMRKRKLEREAKKTEKAAKKKDICNKKEDAKNDNVGISTRKRKLETGDRKTEKILKKKKVTKKDKKQCTRSPEIESTKQPESRRLKLKCGACQEDLNSDTEDEGSKNIGCDDCIRWYHLKCTELKYLPYSTAAEADFTCNFCEAAECARRAVLKDYNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01280173;
90% Identity: iTF_01280173;
80% Identity: -