Paur015662.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- stc
- Assembly
- GCA_963584085.1
- Location
- OY757263.1:2604856-2612059[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1.4 2.2e+04 -3.6 1.6 15 19 411 415 410 415 0.81 2 10 0.023 3.8e+02 2.1 1.2 2 10 443 451 443 451 0.93 3 10 2.2e-05 0.35 11.8 18.1 4 19 459 474 457 474 0.93 4 10 4.3e-08 0.00071 20.4 12.3 1 18 510 527 510 528 0.98 5 10 7e-06 0.11 13.3 16.4 1 19 569 587 569 587 0.98 6 10 2.9e-05 0.47 11.4 10.4 1 19 628 650 628 650 0.88 7 10 2 3.3e+04 -4.6 2.2 6 10 680 684 680 684 0.94 8 10 0.0019 32 5.5 7.4 1 11 690 700 690 701 0.95 9 10 0.023 3.7e+02 2.1 0.4 3 10 704 711 703 711 0.91 10 10 2.2e-06 0.035 15.0 14.0 3 19 719 735 717 735 0.92
Sequence Information
- Coding Sequence
- ATGTCACAGTGGAACAATTCATACGCGTACAACAACCAACACCAAGGTTCTGACACCTGGAACGAAGATCTGAATAGGCAGTACGCGAACCAAGGTTATTATCCTAACCCCAACCGACAATACGACTCCGGCAACCAACAGTATGTGAGCTTTAATGAATTTCTTACTCAAATGCAAGGCAATGGAGCAAGTCAGCCTAATGCGAGCAACTATAGCAATACGCAGTATCAAAATTATGGCCAATATGACTATCAAAACATGCCATCTACCTCCCAAAATGCACAAGTAGAAACTCATCACGCTAATAGCAGTTCAAATGGACCAAATGGTGCAGATTCATACAGTAATAGTCATTATGAAACACAACCACAAGACAATACTTTGTACTCGAATGATTTAATACTCAAATCAAAATTGACAGCTACGGCTTCGGAATTTGTGCCAAAAAATTCTTCAGTGAAGCAATCAGCTAGTGCTCAAAATATACCTGAAGCAACCAACTCGAATGGTAGTAATAATGGAGCTACTGAATATAAAAAGAGTCATGGTAGTTCATCTGGCACTAACTGGAGAGAAAGACCTCACTCTTCTCAACAGAATGGtgaagcaaaaaataatagtcgCTATCAAGACAATAATCATAAACACCAAGAAAATAGTAATAGGAACAGGGACCGTGATCGTGACCGTAATAGATATCAAGACTCGGGCAGCCAAAACTATGAAGCCAGTAGCAGAAATGATAGGAATCAATCAAAGTCTAATAATTCTAAATCCAAAAATAAAGATCCTGAGGCCCTTACTTTTTATAACAGTTCTATAAATAAGAGAGGCCAAGACCGTAATGGAAAAGGTGAAGGCTCCAGCAAGAACCGGAACTGGGCTGGAAGTCAGAGGATCAGAGCTGTAGATAGGAATTATTCTGAAGATGAGCAGTATGCTAATAGCTATTTGCAGTATAAAGATGAGAAAACTGAGAGGTTGGCGAAACAAGAACTTCCCAGTCCTAAATTTAGAAGCAAACAAACTGCTAACACAGTACACACAGAAATGACTCAGCGTGAGCGACTGAGTGAGCAACTGGATAAAGGCACACTTGAGTGCCTGGTGTGCTGCGAGCGGGTCAAGCAAAATGACTCTGTGTGGTCGTGCAGCAACTGCTACCATGTTCTGCATCTGAGGTGCATTCGGAAGTGGGCCATGAGCAGTGTTGTTGAGGGTAAATGGCGGTGCCCGGCCTGTCAGAACACGAGCGAAGAGATACCAACCGAGTACCGCTGCATGTGCGGCGCGGTCCGCTCGCCGGAGTACCAGCGCGGCGGGGGCGGCGCGCACACGTGCGGCAGGGCTTGCAAGCGAGCGCGCACGTGCCCGCACCCGTGCACGCTGCTGTGCCACCCCGGGCCGTGTCCGCCGTGCCAGGCCACTGTTAGCAAAAAATGCGGTTGCGGCGCGGAGACGCGTTCCGTGTTATGCAGCAGCAAGCTGCCGCAAGTGTGCGCCCGCACGTGCGGCAAGACGCTCGAGTGCGGCGCGCACGCGTGCCAGGCCGAGTGCCACGAGGGGCCCTGCCAGGACTGCGCGGAGACCGTCGCTCAAGTGTGCTACTGCCCGGCAGCGAAGAGCCGTTCGGTCCCCTGCACACGCGAAACCGGCAACGAGAAGCACTGGTCGTGCGGCGAGTCCTGCTCGCGCATACTCGCGTGCGGCCACCACGTGTGCCAGGAGACGTGCCACGCGCCGCCCTGCGCGCCGTGCCGGCTGCTGCCGCGGCTGGTCGTCACGTGCCCGTGCGGGAAGAACAAGTTAGATAAAGATTCACGCAAGTCATGCACTGACCCGATCCCGCTATGCGGCAACATCTGCGCGAAACCATTGCCGTGTGGCCCCGCTGGCGACAGACATTTCTGCAAGCTGGACTGCCACGAAGGTGAATGCCCCATATGCCCCGACAAGACGCTAGTGCAGTGCCGCTGCGGGCACTCGACGCGCGAGGTGGCGTGCGCCGAGCTGCCGCAGATGCTCAACAACGTGCTGTGCCAGAAGAAGTGCAATAAGAAGTTATCCTGCGGCCGCCACCGCTGCCGCACCGTGTGCTGTGCGGCGTCGTCCCACCGCTGCGCCGTGGTGTGCGGGCGCACGCTCTCCTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACGGGCCACTGCGCGCCCTGCCCGCGCGTCAGTGAGTGCCGCCCTTTACTTTACtaa
- Protein Sequence
- MSQWNNSYAYNNQHQGSDTWNEDLNRQYANQGYYPNPNRQYDSGNQQYVSFNEFLTQMQGNGASQPNASNYSNTQYQNYGQYDYQNMPSTSQNAQVETHHANSSSNGPNGADSYSNSHYETQPQDNTLYSNDLILKSKLTATASEFVPKNSSVKQSASAQNIPEATNSNGSNNGATEYKKSHGSSSGTNWRERPHSSQQNGEAKNNSRYQDNNHKHQENSNRNRDRDRDRNRYQDSGSQNYEASSRNDRNQSKSNNSKSKNKDPEALTFYNSSINKRGQDRNGKGEGSSKNRNWAGSQRIRAVDRNYSEDEQYANSYLQYKDEKTERLAKQELPSPKFRSKQTANTVHTEMTQRERLSEQLDKGTLECLVCCERVKQNDSVWSCSNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPTEYRCMCGAVRSPEYQRGGGGAHTCGRACKRARTCPHPCTLLCHPGPCPPCQATVSKKCGCGAETRSVLCSSKLPQVCARTCGKTLECGAHACQAECHEGPCQDCAETVAQVCYCPAAKSRSVPCTRETGNEKHWSCGESCSRILACGHHVCQETCHAPPCAPCRLLPRLVVTCPCGKNKLDKDSRKSCTDPIPLCGNICAKPLPCGPAGDRHFCKLDCHEGECPICPDKTLVQCRCGHSTREVACAELPQMLNNVLCQKKCNKKLSCGRHRCRTVCCAASSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSECRPLLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -