Paur028540.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrausta aurata
Gene Symbol
-
Assembly
GCA_963584085.1
Location
OY757281.1:345048-370482[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.035 3 9.3 3.7 1 23 1073 1095 1073 1095 0.99
2 10 0.042 3.6 9.1 1.6 2 23 1103 1124 1103 1124 0.96
3 10 0.43 37 5.9 1.0 1 23 1158 1180 1158 1180 0.96
4 10 5.9e-06 0.00051 21.2 1.8 2 23 1185 1206 1185 1206 0.97
5 10 0.21 18 6.8 0.8 1 23 1212 1234 1212 1234 0.97
6 10 0.0058 0.5 11.8 2.3 2 21 1241 1260 1240 1265 0.93
7 10 0.0073 0.63 11.4 0.2 1 20 1273 1292 1273 1296 0.88
8 10 0.098 8.5 7.9 0.9 2 23 1303 1327 1302 1327 0.95
9 10 6.3e-06 0.00054 21.1 2.0 1 23 1336 1358 1336 1358 0.97
10 10 0.45 39 5.8 0.5 1 23 1364 1387 1364 1387 0.92

Sequence Information

Coding Sequence
ATGAATATAGAATTCATTTCTACATCTCCAAAACCTATTTGTGAAGGCTGCTTGAGCGTCAATCGTACGTTAACACCAGTGCATGATGTTGAAATAGAAAGGATTTTCAAGCTGTTACTTGACCCCATACCCAGTTATTCCGGTATTATCTTAAAGTCAATGTACAATGATTTCGATAGCAATCAAACTCACATAGAATCTTTATGCGAAATTCCAGATGACGAACTCCAGGAAAGGGAATCCTTCGAGACAAAATATCATGCAGCGGTCGCCTCTGCGGAGGAGTTGCTGGACAGGAACTCGAGCTTCTCCAGCAGGCGTTCCTCGGCGGGCGATGTCGGCTCACAGATACCACAGCACATTCAACTCGCAGACCCAGCGTTCCATACGCCGGCCGAGGTTGAGATGTTGCTCGGAGCTGACCTCTTCTGGGAGGTACTCGGTAATAATACTATTTCCCTAGGAAAAAACCGACCTAGTCTAAATGAAACTAAGTTAGGCTGGCTGGTTTCAGGCGTAAGCCGAACTCACATACCCAACTCAAACAAGAGTAATTCATTCAAACACAACTCATCACAAACTACAGTCCATTGCCATTTTTCAAACACTTCGGACACTGAGCTACAGAAGAAACTCGACCACTATTTCGAGTATGAATCATTCAGTGATCCACCTCGTCACACTAAAGACGAAATACAATGCGAAGCCATTTTCGCTCAAACTACAATTCGCCACCCAGATGGTCGATTTGTAGTTAACATTCCATTAAAAACATCTCCCACCATTCTTGGGGATTCCTATGAACAAGCAAATGCTAGATTTTTTGCGTTAGAACGCAGATTTAGccgtgatttaaattttaaaacaaaatatacagaATTCATGAAAGAATACTTAGAATTGGGTCACATGACGGAGGTCATTGACCCCCCAAAGGGCGAAACTGCCTATTATCTGCCGCATCACGGTGTATTAAGGGAAACTAGCCTAACAACTAAACTAAGAACAGTTTTTGATGCATCTGCACCCACCACATCAGGTTATTCCTTTAATGATATCCAACTCATTGGCCCCCCAGTGCAGGATGACTTAATGAGTATTTTACTACGTTTCAGACAACATAAATTCATTGTAACAGCAGACATAGAAAAAATGTATCGAATGGTGTTGATTAATCCTGAACAAAGGTCACTACAGCAAATACTGTGGAGATCTGACCCTACAGAAAAATTAAAGGTTTATGAATTAAACACAGTCACGTACGGCACTGCGTCTGCACCGTACCTTGCCACCAAGTGTCTAACACAGTTAGGACATGATTACTTAAATGATCCACTCACAGTTAACTCAACTCAACATACCCAAGCTAAAATCCTTTTACAAAAACTGTGGGCTGATAATATAGCATGGGATGATACAATATCTCCAGAGTTCTACAAACAATGGCATGATTTTCTTAAACATTTACCTTATCTTAACAATATTCAAATACCACGACATGTCATATGTGACTCACCTATAAAAATTGAACTTCATGCATTCAGTGATGCATCTATACATGCATATTCAGCATGTATATACATCCGTAGCACTTCTAATAAAGGTTCTATTAACGTTCATTTGCTGGTTGCCAAGTCACGAGTTGCACCATTTAAGAAAAACATCACAATCCCCAGGTTAGAATTGTGTGGTGCTGTTCTAGCAATGCGGCTGGCAAAGAAGAATACAGCTGTTGATTATGCCGGACCGGTCATGATAGCGGACAGAAAAGGCCGTGGTTGCAGGCTATTGAAAGCATATATATGTGTATTTGTATGCCTTACAGTCCGAGCAGTTCATCTAGAGCTTGTCACCGAGCTAAGTACAAATGGTTTTATGGCCTGTTTAAATAGATTCATCGCCCGTCGAGCGGAAAATCACATAGAATTCAAATTCTCTCCAGCGTATAGTCCTCATTTTAATGGATTGGTCGAGGGCTGCGTCAAGTCGATCAAATATCATTTGAAACGGGTCATAGGTCTTACTAACTTAACTTATGAAGAATTGACAACATTGCTAGTGCAGGTAGAGGCAATTCTTAATTCAAGGCCGCTCACTCCCCTCTCTTCAGATCCTTCTGATCTCACTGCCCTGACCCCTTCACATTTTCTTTTGGGACGAACGATCATGATGACCGCTCCGCAGAACTTCAACGAAGAAACAAGTGGTGCAAGCCAGCAGAAGGGCTACGCCTACATCAAATGGTTGTGGTCAAGGATGACCGCCTACCTCCCAATCGATGGCTGCTGGGACGCATCTGTCACGTCTATCCCGGCACCGACGGCGTCGCACGCGTCGCTGACGTCCTCACCTCATCCGGGACTCTACGAAGAGCGTTCAACCGACTCATCCCTCTACCAATATTGGAACCAGAGGTTCCAACGCCGGCAGCATGTTAACGCGCATCACTACGCGGAACCCCCTCGCACCCCCCAGCCCGCTGTGCCCTCCTTCTTCTCGCCTCGGCTGCGGTCGTGCGCACACGCGTCCCGCGCGATATATACTTTCATCGAAAAGCAGCCAAAGATTGATTCAAGGTTACAAAGGAACAATGAGCACTTcagtagtccaacggaacctaCGTTTGTTAAGGTGGAGGAAAAAGATGAAGATgaaaataatgattatgatgggTTTTATGTAATGAATAATGATAGCGGTGTTCATGATGAAGATTTGGTGGCAGTATTAAAAACAACCACAAACAACCCTGGaggaattaaaattataaaagaatCGAATAAAGATATAGAAGAATTTGGTGAATCAGATGATGAACCACTGAAGAAGAAAGCGGAGACAAAAGATCTGAAGAAAAAACCTAGgggaaagagaaaaaataaaaacggaaCTGCAGAAGACAAGAGCAAGAAGCAAACACGTGAGAAGCCAGCGGGCGTGGTGACACACGAGCGAGTCGCGCGACGACTGCGACAGCTTAACGTGCCGCGCGGGCAAGTTGAGATGTGTGTGCTTGCCTGGGAGGAGGTAGGAGTCATTAGCAAGAAGCAAACACGTGAGAAGCCAGCGGGCGTGGTGACACACGAGCGAGTCGCGCGTCGTCTGCGACAGCTTAACGTGCCGCGCGGGCAAGTTGAGATGTGTGTACTTGCCTGGGAGGAGGTGGAAGCCGAGAGACAGAAAGCGCTCGGCAGCGCCGCCTACACGCGACACGAGTACCGCTGCGAGCGCTGCGCCCTCGGGTTCAACCATCGCTTCAAGTTAGATAACCATATGAAGAAACATGACCCGGCGCGCGGCAACGCGGAGTGTTCAGCGTGCGGTATCTACTGCCGAGACGCGCACGCTCTTTCTGCGCATAGAAGAAGACATCGTGTTCGATGGCGTTGCGTGGTCTGTGGCGACATGTGGTCGCGCGCGGCGGTGGCGGCCGACCACTGCGCCAGGACGCACGGCGCCGATGCGCCCACGCACACTTGCAGCGTCTGCGGGGACACGCAGCCGAGTTTGGGCAAGCTACGGAACCACATGAAGAACCACGCAGAGCGGCCCAAATGTGATCTGTGCGATAAAACGTTCAGAGACAAATCATCACTGAGGACGCATCTATTCATCCACAAAGGCGAGAAGGAGTATGCGTGCGCGGTGTGCAACAAACAGTTCCTGTTCAAGAAGGCGATGCAACTACACAGGCTCACTCACGACGCGCCCGCGCATCTGTATTGTACACAGTGTGACCTCACATTCAAGAACAAAATGACATTCTACCAGCACATGAAGTACAACTTGAAACACATAGACCCCGCTCTACTGAAATACGCGTGCGAGACTTGCGGTAAGAAATTCACGAAAGCAGCGAGACTGAGTGAACACAACACGGCGGTTCATTTGAAAGCCACGCCGGTCAAATGCACCGTACCTGACTGCAATTTTGCGTGCTCGTCGCGCACGGTGCTGCGCACGCACGCGCGCATGCTGCACCGGCGCGCGCGCGAGCGCCGCGACCACGTGTGCCACGTCTGCGGGAAAGCGTACAAGACAAAAACATCTCTCGAAGGGCACATGCGCGCGCATTCGGGCGAGCGCCCGTTCGCGTGCGCGCACTGCTCGTCCACGTTCGCATACGAAGCCGCGCTCTACAACCACAACAAACTCGTGCATTTGAAGGCTAAACTGAAAAAATCATCAGAGCAACTTTCAGACGCAACCGTCACAACATCCCGTCAGGGTCAGGCCTTCACCCCAGCACAGGATGATTTCACCCCACTCATAGCTGTTAAGGCACCTAATGTATTCTGTAACCAGCCGTTGTAA
Protein Sequence
MNIEFISTSPKPICEGCLSVNRTLTPVHDVEIERIFKLLLDPIPSYSGIILKSMYNDFDSNQTHIESLCEIPDDELQERESFETKYHAAVASAEELLDRNSSFSSRRSSAGDVGSQIPQHIQLADPAFHTPAEVEMLLGADLFWEVLGNNTISLGKNRPSLNETKLGWLVSGVSRTHIPNSNKSNSFKHNSSQTTVHCHFSNTSDTELQKKLDHYFEYESFSDPPRHTKDEIQCEAIFAQTTIRHPDGRFVVNIPLKTSPTILGDSYEQANARFFALERRFSRDLNFKTKYTEFMKEYLELGHMTEVIDPPKGETAYYLPHHGVLRETSLTTKLRTVFDASAPTTSGYSFNDIQLIGPPVQDDLMSILLRFRQHKFIVTADIEKMYRMVLINPEQRSLQQILWRSDPTEKLKVYELNTVTYGTASAPYLATKCLTQLGHDYLNDPLTVNSTQHTQAKILLQKLWADNIAWDDTISPEFYKQWHDFLKHLPYLNNIQIPRHVICDSPIKIELHAFSDASIHAYSACIYIRSTSNKGSINVHLLVAKSRVAPFKKNITIPRLELCGAVLAMRLAKKNTAVDYAGPVMIADRKGRGCRLLKAYICVFVCLTVRAVHLELVTELSTNGFMACLNRFIARRAENHIEFKFSPAYSPHFNGLVEGCVKSIKYHLKRVIGLTNLTYEELTTLLVQVEAILNSRPLTPLSSDPSDLTALTPSHFLLGRTIMMTAPQNFNEETSGASQQKGYAYIKWLWSRMTAYLPIDGCWDASVTSIPAPTASHASLTSSPHPGLYEERSTDSSLYQYWNQRFQRRQHVNAHHYAEPPRTPQPAVPSFFSPRLRSCAHASRAIYTFIEKQPKIDSRLQRNNEHFSSPTEPTFVKVEEKDEDENNDYDGFYVMNNDSGVHDEDLVAVLKTTTNNPGGIKIIKESNKDIEEFGESDDEPLKKKAETKDLKKKPRGKRKNKNGTAEDKSKKQTREKPAGVVTHERVARRLRQLNVPRGQVEMCVLAWEEVGVISKKQTREKPAGVVTHERVARRLRQLNVPRGQVEMCVLAWEEVEAERQKALGSAAYTRHEYRCERCALGFNHRFKLDNHMKKHDPARGNAECSACGIYCRDAHALSAHRRRHRVRWRCVVCGDMWSRAAVAADHCARTHGADAPTHTCSVCGDTQPSLGKLRNHMKNHAERPKCDLCDKTFRDKSSLRTHLFIHKGEKEYACAVCNKQFLFKKAMQLHRLTHDAPAHLYCTQCDLTFKNKMTFYQHMKYNLKHIDPALLKYACETCGKKFTKAARLSEHNTAVHLKATPVKCTVPDCNFACSSRTVLRTHARMLHRRARERRDHVCHVCGKAYKTKTSLEGHMRAHSGERPFACAHCSSTFAYEAALYNHNKLVHLKAKLKKSSEQLSDATVTTSRQGQAFTPAQDDFTPLIAVKAPNVFCNQPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-