Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757281.1:3256596-3265978[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.2 5.4e+02 2.2 0.2 3 17 303 317 302 318 0.88

2 16 0.22 19 6.8 2.3 3 19 322 338 321 340 0.95

3 16 1.4 1.2e+02 4.3 0.7 1 23 358 381 358 381 0.85

4 16 0.011 0.92 10.9 0.2 3 21 420 438 419 439 0.95

5 16 0.035 3 9.3 1.9 1 23 443 465 443 465 0.98

6 16 0.0072 0.62 11.5 5.9 2 23 719 740 718 740 0.96

7 16 0.4 34 6.0 0.5 2 23 746 767 745 767 0.94

8 16 0.08 6.9 8.2 0.1 2 21 773 792 772 793 0.93

9 16 0.042 3.6 9.1 0.2 1 23 816 837 816 837 0.90

10 16 1.8 1.6e+02 3.9 4.0 3 23 901 921 900 921 0.92

11 16 0.00053 0.046 15.0 3.3 2 23 937 958 936 958 0.96

12 16 7.7e-06 0.00067 20.8 3.7 1 23 964 986 964 986 0.99

13 16 0.14 12 7.4 3.7 1 20 990 1009 990 1012 0.94

14 16 0.0022 0.19 13.1 1.3 2 23 1019 1041 1018 1041 0.96

15 16 0.29 25 6.4 0.5 1 20 1048 1067 1048 1071 0.91

16 16 0.0016 0.14 13.5 0.1 3 23 1080 1101 1079 1101 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.2	5.4e+02	2.2	0.2	3	17	303	317	302	318	0.88
2	16	0.22	19	6.8	2.3	3	19	322	338	321	340	0.95
3	16	1.4	1.2e+02	4.3	0.7	1	23	358	381	358	381	0.85
4	16	0.011	0.92	10.9	0.2	3	21	420	438	419	439	0.95
5	16	0.035	3	9.3	1.9	1	23	443	465	443	465	0.98
6	16	0.0072	0.62	11.5	5.9	2	23	719	740	718	740	0.96
7	16	0.4	34	6.0	0.5	2	23	746	767	745	767	0.94
8	16	0.08	6.9	8.2	0.1	2	21	773	792	772	793	0.93
9	16	0.042	3.6	9.1	0.2	1	23	816	837	816	837	0.90
10	16	1.8	1.6e+02	3.9	4.0	3	23	901	921	900	921	0.92
11	16	0.00053	0.046	15.0	3.3	2	23	937	958	936	958	0.96
12	16	7.7e-06	0.00067	20.8	3.7	1	23	964	986	964	986	0.99
13	16	0.14	12	7.4	3.7	1	20	990	1009	990	1012	0.94
14	16	0.0022	0.19	13.1	1.3	2	23	1019	1041	1018	1041	0.96
15	16	0.29	25	6.4	0.5	1	20	1048	1067	1048	1071	0.91
16	16	0.0016	0.14	13.5	0.1	3	23	1080	1101	1079	1101	0.96

Sequence Information

Coding Sequence: ATGTCTGGAACGAATCAAAAGAGGTGTAGGAAGTCTAAATTGGTGCCGCGGTCGTTCAAAGACTGTGACGATGATTCCGATAACAATTTGCAGGATGATCCTAAAAATAAAAGGCCAAGGATATTTGCAGATTCTAGTAGAATCACAACCATTCAAGATCAGCCTTCAACATCAAAATATGAACCATTACAATTTGACATCAAAATTGAAGTGGAAGAATGTGACGAATTCGAAACAGCAGAAATATTACCAACATCCGATATAAAAACTGAAATCATAAATGAAAATGATCTATTCGAAGTTGAGGAACAAGAAATTAACTTATTGTTAACCCAAATGGCTAAAAAGAGTACAAAACTCGATAAAAGTTACAATGACAGTCAAGGCAATGCTTCAGCATTGGACTTGGATCATGATTACAGTCCAAAAGAACAAAAACTCCTAACTAAAAAGAAACATGGTGCTAATAAGTCATCAATGCCCTCGGCAGTTTCTCATTTAAAGTTAGATGaagattttattttgaaagcgTTAGATGATctctgtaaaaaaagtacaatgTCATTGGCAGATAATATATTAGCAGTTGAAATGAGAAATTTATGGGGACGATGTAGGACAGTTGATTGCTACCAAACAGAGACAGAGAAAAGTATTCAAATAGCCATAAATACTGTCAAATATTGGAGAACTTCAACAAAGGGCGGGGAAGTTCCTTTGATGTACAAATGCTATGTTTGTGAAAAGGCATGGTGGCATCTCGGACCATTTGAGGAACATGTTCTCACTCATAGCGAAGAATTGAGAGTGGTATCAGAGTTACAGAAGCACTCTTTGCAGTACAATATTGTAGCATATTCAGCGCAATCCTCACTTTTGTTCAAAGACTTCAATATCGACTCTGACTGTTGGAGGTGTGGCTATGGATTTGACCATCACGTTAACTATGAAAAGCTAAACTTATGCGAGTACTGCTCACAGACTTTTTCGAATTGTTTCAAATATCGAGCCCATGAGACATTGTGTGTCAAAAGACTGAAATCGTTGATCAAATCTGGGCCGATTGTACTTTTTACCTGTCACATCTGCGATTTAAAGCTGTTAAATAAAGAGGTATTAGAGATCCATTACTTGGAATACCACAGTGTGCGATCAGACCTGCCAATGGTTGTTGATATCCGTAACTGTACGACTTGCTACCAAAATTACTCATCTCTAGCATTACACTATTGTAATAGAAAGCACTATAGTGTTCTGTGCCAGCACTGTGCCAAGAGGTTTCCTAGTAAAGTGGCATTGAACATTCATTTACAAGAAGAAAGCAACTATCCATGTGCGATATGTCACACTAAATTACCTAAGAAATGTATGCTCGCAGAACACATGCTGAAACATTCAAACAAATTCATGATGCTGCAAAAGTGTTTGTCATGTCAAGATAATATATTGCTGCTTGACGAAATTTCTGTGAGACAGCACAAAGTCATATGGCACAAGCAAAAGATTGATAAAAGGAGAAACTACTTCGATATGGTGTTGGTGCCCCGTGAATTCATTGAGGAACAGAAGTCATCACTCTTGGTCTCGTATGACATGACAGCTGTCGATGAGGAGTTACAGCCTGATGAACAGAAACTAAAAGAGTTGAGACAGCGCCTCATTGACCAGAAAGAGTTAGGTACATCAGTGCAAATGATCGCAGTAAAAGAGGAAAATGATTCACAAGAAATTGATTTTGAAAGAAACTTACCGTCTACAAGTATATTCGTCAAACAAGAAGATGAAGATTTCGAAACAATGTTCGAAGAGAAGATTATCAAGGAAATGCAGAAAAACACCAACTTCACTGAAGAAGACGAAGGGTACGAGTATTTACTTTCAAGCGTTTTCAACAGTTCTAACTGTACGATACTTAATAACCAAATAGCTGAAGTAACTGATgaatttgaagaaataataaacAGAGAATTGAAGAATAAGTCTAAGAAGCAATCGAAAAACTCTAAAGAGCAATCTAAGAATTCTAAAAAAACTAAGCAAAATGATTCCAAGACTGTAATATTAGATGATGGTGACAAAGATAGAGCTCACTTGAAAGTAGTATCAACGAAAGAAGGAATCAACGGTGacaaaacgaaaaaaatattaaaatgcgaGTGCCACGATTGTGACTATGAATGCACGGACAAACAGAAATTAATAGCTCATAGACAGAGTCATAAAACGGTTGTTATATCTTGCAGTAAATGTACTGGGACTTTCAACAGTCTAAGAGAATACTTAGACCATTTGACAGAGCACGGTCTCGTAAAATTGTCGTGCCCAGAATGTATGAAGATATTTACGTCTTTTAAGGGTCTTACCGGTCACATAAAAGTGGCTGCTTACCGGTCGTTTTCACGAACACAATTTGTTGATAAGGAACGGGATAAGCTCTGTGTAAATTATCAGTGTAAGAAATGTGGCCAGTCGGTGGAGAGAGAAGCATTGTTGGACCATTGGGAAACGCATTTAGTGTGGAACGATTTGTCCATTGTCAAAGTTGAGATTTTGGAGGAAGACGGAGATATTGATGTTGATGGTGTACAATGTGATACTGTGGTAGATGACGCAGAACAGGACATGACTCCGGAGGTTATGCAACGAGTTCTTgCGTCTTTAGTAGACTCGAACAAGAGGAATCATCCATTCCACAAAATGTGCCTAGCGTGTGGTAGATCGTTCGAGCGGCGAAACGACTGCAAAAGACATCACATCGAACATCTGCTTGCGAACGCTTATTCCACCAAagTGTTTCATCACGGACTCCGCTGCCAAATATGCCATTCCACATTCGAGAGGCCGGACGCATACAAACACCACATGAGGGACCACGGCCACTTACCGGTTTACAAATGTGAACTGTGCTTCAAAACGTTCAGCGATTCCAGTAATTATGTCAAACACAAAAAGACACACAGTTCAATGTACATTTGTGATATTTGCAAGAAAAAGTTTCAAGCGAAGCATTCTATTATCAAGCATATGGAGtGTCACTCCAATACTGATCCAATTAAATGCATGTTCTGCCATAAAGTTGTGTACACCGAAGCGGACTTTTCCAGGCACATGCGGAGTGCACACAACCAGAGCCTTTTTAAATACACCTGCATAATTTGCAAGAAACGGTTCAGAACTACCAAAGACAAATGGGATCATATGTGGGTGGTCCACAAAGAGAGGACGATAAAAGCTGACTGTCCGATATGTAACGCAGAGTTCAGGAAATTGAGCGATGTGAAAAATCATCTGCGAGCGTTACACAATCAGGAGACAACTGTTATGAATTCAAAACTGTTTAATCAGCTAGTAAAGAAGTTAAATAATAAGGATGATGCAACATTTAAAAGTATAGAAGACGATGTCCAGCAGTATGTTGTTGTGAGAAACGAAGAGAATAGTAAACAGTTTGagatttacaacaaaaatgtcATTTTGAGTATAATGAAAACTGTATGGGATAAGGAGTAA
Protein Sequence: MSGTNQKRCRKSKLVPRSFKDCDDDSDNNLQDDPKNKRPRIFADSSRITTIQDQPSTSKYEPLQFDIKIEVEECDEFETAEILPTSDIKTEIINENDLFEVEEQEINLLLTQMAKKSTKLDKSYNDSQGNASALDLDHDYSPKEQKLLTKKKHGANKSSMPSAVSHLKLDEDFILKALDDLCKKSTMSLADNILAVEMRNLWGRCRTVDCYQTETEKSIQIAINTVKYWRTSTKGGEVPLMYKCYVCEKAWWHLGPFEEHVLTHSEELRVVSELQKHSLQYNIVAYSAQSSLLFKDFNIDSDCWRCGYGFDHHVNYEKLNLCEYCSQTFSNCFKYRAHETLCVKRLKSLIKSGPIVLFTCHICDLKLLNKEVLEIHYLEYHSVRSDLPMVVDIRNCTTCYQNYSSLALHYCNRKHYSVLCQHCAKRFPSKVALNIHLQEESNYPCAICHTKLPKKCMLAEHMLKHSNKFMMLQKCLSCQDNILLLDEISVRQHKVIWHKQKIDKRRNYFDMVLVPREFIEEQKSSLLVSYDMTAVDEELQPDEQKLKELRQRLIDQKELGTSVQMIAVKEENDSQEIDFERNLPSTSIFVKQEDEDFETMFEEKIIKEMQKNTNFTEEDEGYEYLLSSVFNSSNCTILNNQIAEVTDEFEEIINRELKNKSKKQSKNSKEQSKNSKKTKQNDSKTVILDDGDKDRAHLKVVSTKEGINGDKTKKILKCECHDCDYECTDKQKLIAHRQSHKTVVISCSKCTGTFNSLREYLDHLTEHGLVKLSCPECMKIFTSFKGLTGHIKVAAYRSFSRTQFVDKERDKLCVNYQCKKCGQSVEREALLDHWETHLVWNDLSIVKVEILEEDGDIDVDGVQCDTVVDDAEQDMTPEVMQRVLASLVDSNKRNHPFHKMCLACGRSFERRNDCKRHHIEHLLANAYSTKVFHHGLRCQICHSTFERPDAYKHHMRDHGHLPVYKCELCFKTFSDSSNYVKHKKTHSSMYICDICKKKFQAKHSIIKHMECHSNTDPIKCMFCHKVVYTEADFSRHMRSAHNQSLFKYTCIICKKRFRTTKDKWDHMWVVHKERTIKADCPICNAEFRKLSDVKNHLRALHNQETTVMNSKLFNQLVKKLNNKDDATFKSIEDDVQQYVVVRNEENSKQFEIYNKNVILSIMKTVWDKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -