Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757275.1:3884614-3885771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.078 6.7 8.2 0.4 2 22 161 181 160 184 0.89

2 7 8.3e-05 0.0072 17.6 0.7 3 23 191 210 190 210 0.97

3 7 3.1e-05 0.0027 18.9 0.5 1 23 216 238 216 238 0.97

4 7 0.0007 0.06 14.6 3.9 1 23 244 266 244 266 0.99

5 7 1.4e-06 0.00012 23.1 0.2 1 23 272 294 272 294 0.98

6 7 0.00031 0.027 15.8 1.0 1 23 300 323 300 323 0.97

7 7 3.2e-06 0.00027 22.0 2.1 1 23 329 352 329 352 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.078	6.7	8.2	0.4	2	22	161	181	160	184	0.89
2	7	8.3e-05	0.0072	17.6	0.7	3	23	191	210	190	210	0.97
3	7	3.1e-05	0.0027	18.9	0.5	1	23	216	238	216	238	0.97
4	7	0.0007	0.06	14.6	3.9	1	23	244	266	244	266	0.99
5	7	1.4e-06	0.00012	23.1	0.2	1	23	272	294	272	294	0.98
6	7	0.00031	0.027	15.8	1.0	1	23	300	323	300	323	0.97
7	7	3.2e-06	0.00027	22.0	2.1	1	23	329	352	329	352	0.97

Sequence Information

Coding Sequence: ATGGTTGGCCCACTCCTTATGTTGAAACTGATGCACTGCAAGCAAATGTGCAAAAACCGGAGCAAATCATGTGTAAAAGAAGAAACCTCGTACGAGTCTGCTGATGATGAAGCTAAAGAAGATGTGACTAATTGTCGAATATGCTTGAAAGAAGGCAACATTCCAATTTATGGTAATGAAGTCGTGGACGACGTATCTGAAGCTGTAAGAACTTTTGGCGGCGTAGAACTTGAAATTGACGACCCTTACACAAAATTTTTATGTCAACACTGCTACACACAAGTCcaaaatgcaatttattttcGTAAGACTGCTCAGGAAACAGATTTAGTCCTAAGAAATCCTGCAGCAGCATTATCATACAATTTTGAAAATCATGGCGGTACAATGTTTTCTGATGCGAACGACCAACCTGATTCTGATATGGATGTCCCGTTAACTGAATATAAGACTAGGAGTGAGAATAAAGAGAGACGGTGGAGTTGTAAAAGATGTGATTTAGATTTCTCAGGATTTGAAGACTACCAACAACATAGATTGTCTGATGAACATGAAAATTTCCGAAGGATTTGTCCTATATGCAACAAATCTTTTACTTATTCTtcaattaaaaatcacatgaaacTTCATGGAAGAGAAAAGCCCTACATGTGCGATTTCTGCGGCAAGAAGTTTATAATGCAAGGACAGTTTGCCCGCCACCGCGCCATTCATATTAACCATTTACCATTTAAGTGTAACTTATGTCCTTATCGTGGCAGATTCAATGAATGTCTAAAAATGCATATGAGGACACATACAGGAGACAAGCCATATATATGTAGCCAATGCCCCGCACGGTTTGTCAATAAAAGCAACCTCTCGAGACATATCCTAATTCATAAAGAAGAGCGTGACTTTAAATGTGATTCATGTGATAAAGGATTTTACACTAAAAGAGAATTTGATTTGCACTTACAGGTTGATCATACTGGAGTTAAAGATCATGTATGTAATATGTGTGGTAAAGCTTTTGGTTACAGGAGACAGTTACTGAAACATCAACGGAAAGTGCACAAAAGAGAGAAAATGAAAGGTGGTAGAATACCAGTTTATTTAACGCTTGAATCAGAGAAAAGAAGACAGGAATTACTATCAGAGAGTCAGAGTtcaatttaa
Protein Sequence: MVGPLLMLKLMHCKQMCKNRSKSCVKEETSYESADDEAKEDVTNCRICLKEGNIPIYGNEVVDDVSEAVRTFGGVELEIDDPYTKFLCQHCYTQVQNAIYFRKTAQETDLVLRNPAAALSYNFENHGGTMFSDANDQPDSDMDVPLTEYKTRSENKERRWSCKRCDLDFSGFEDYQQHRLSDEHENFRRICPICNKSFTYSSIKNHMKLHGREKPYMCDFCGKKFIMQGQFARHRAIHINHLPFKCNLCPYRGRFNECLKMHMRTHTGDKPYICSQCPARFVNKSNLSRHILIHKEERDFKCDSCDKGFYTKREFDLHLQVDHTGVKDHVCNMCGKAFGYRRQLLKHQRKVHKREKMKGGRIPVYLTLESEKRRQELLSESQSSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01124937;
90% Identity: iTF_01282760;
80% Identity: -