Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757261.1:10315649-10318837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00011 0.0096 17.2 1.1 1 23 190 212 190 212 0.96

2 11 8.7e-05 0.0075 17.5 3.1 1 23 218 241 218 241 0.98

3 11 0.0009 0.077 14.3 2.5 1 23 249 271 249 271 0.97

4 11 0.57 49 5.5 1.4 1 23 278 300 278 300 0.94

5 11 0.11 9.2 7.8 2.6 1 21 306 326 306 328 0.95

6 11 0.027 2.3 9.7 3.8 1 23 334 357 334 357 0.96

7 11 0.004 0.34 12.3 2.2 2 23 363 382 362 382 0.97

8 11 4.6e-06 0.0004 21.5 2.9 1 23 388 410 388 410 0.98

9 11 1.5e-06 0.00013 23.1 1.4 1 23 416 438 416 438 0.98

10 11 0.00011 0.0092 17.2 0.4 1 23 444 467 444 467 0.96

11 11 0.019 1.6 10.2 0.5 1 21 473 493 473 494 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00011	0.0096	17.2	1.1	1	23	190	212	190	212	0.96
2	11	8.7e-05	0.0075	17.5	3.1	1	23	218	241	218	241	0.98
3	11	0.0009	0.077	14.3	2.5	1	23	249	271	249	271	0.97
4	11	0.57	49	5.5	1.4	1	23	278	300	278	300	0.94
5	11	0.11	9.2	7.8	2.6	1	21	306	326	306	328	0.95
6	11	0.027	2.3	9.7	3.8	1	23	334	357	334	357	0.96
7	11	0.004	0.34	12.3	2.2	2	23	363	382	362	382	0.97
8	11	4.6e-06	0.0004	21.5	2.9	1	23	388	410	388	410	0.98
9	11	1.5e-06	0.00013	23.1	1.4	1	23	416	438	416	438	0.98
10	11	0.00011	0.0092	17.2	0.4	1	23	444	467	444	467	0.96
11	11	0.019	1.6	10.2	0.5	1	21	473	493	473	494	0.94

Sequence Information

Coding Sequence: ATGGCTAATGTAAAGAATAGAATACCCCAAAGTAGTGCAAAAAAGGGTCGCAGTGTAACAAAAAGTAATACAACAACGAGTAATGCTATTGAATCAATTACAGTCATGAAAAAGAACTTGAAACTGATGACATCTGAAGATAAAGTGCTATATCCCAATACAGGTGTCCAAACTAAATCCAAATCAAAACAACTCCTCAATGGAAAAGTTAATAAGGGATCGTCCCAGAACAAGAATCTGAGTTTAATGTCAAAAAGTGGACGAATCAAAAAGAAGTGCAAGGAAAAATTAAAGCTTGTCAATAATATATTGAAAAGTGAACTTCTTATTGGTGATACCGACAGTGAGCCAATTTCAAAAATCAGCATTGTCAAGAAAATAACTCTCttcaataataacaatattggTATCAGTGATCACAATCAAACCAAAGGCATTTCCAAAAACACTAAAGCCCAAAAATTACAACACAGAAATAATGATAAAAGGATAATTTCTAAGGTAGGAGATCAGCAAAAAAGGCATTCTAAATCTCATGCAAAGACAAACCATACCACAGACTCCGTTTATCAGTGTGACTATTGTAGCAAGACATTTGGCTCCAAAAAGCTTATAGAGAGACATATCTTTGGTCACCTTAATGTGAAGCCATTCAAGTGTCAACATTGTCCGAAGAAATTCCGGTATGATATAAACATGCAGGTCCACATGATGAGGCTTCATACTGATGATTCGCTTGATGAGTTCAGATGCCATATTTGTGACAAGATCTTTCTGTTTAAAGAGACTCTGAATAACCATCTCAATGACCATGTGAGAAAAGTCAACTTTTTCAAATGTATTTtctgtgaaaataaatattcagaaaGCACTCAACTAGCTCGTCATGAAAAGAATCATTTAGAAAATGGACGGTATCAATGTCCTATGTGTGACATGAATTATGGAATACGGAACCATTTTGAAGCTCATCTTAAATGTCATTCAAAGAATAAAGACTATATTTGTCAGTACTGTGGTAAGGAGTTCTTGAGGCTGAATTCTATGCACAGACATGTGCAAGTCTGTCATAGTGGCCACAGGATACAGTGTCCAATATGTAAGAAGAAACTGAAAGGCCATCTTACTGAGCATATGAGAACTCACGATAAGAAGAGACCACATGAGTGTCCTTCCTGCAAGCAACGCTTCACTCAGTCAACTCAATTAAATGTTCACATGCGTTCTCACACAGGAGCCAGGCCGTATCCATGCAGGATTTGTGGAAGAAAATTCTCTCATTCTAACGCTCTTATGCTCCATATCAGACGCCACACTGGTGAAAAGCCATTCCCATGTGCCATGTGTCCGCTAACTTTTTCCCAGTTGCCACATATGAAAGCTcacatgaaaaatattcatggCAAGGAAAATGCATATAAATGTATCAAATGTGCAAAATTTTTCAAGCTCAAAGTTGATTTGGAGAGGCACTTAAAAGTATGCACAGCCGGTGAAAAAGTTTTGAGCTTTGAGGAAAAAATCCAAGCTTCGGTACAGTATGAGGAAATTGAGGCAGAGTCGGCTATGAGCTTATCTCGAATGAGGTATTTGCTAGCTCTTCTGCTCACCATGATAGCCACCAAAGACAAACTGAAGTATTTAGGTTTCAACAAGCGGCTTATAGACGATCTCCTGATAGAATCTCTTGAAGCGATGCGAGTTAAGCCGTGCAAAGACGACTCTCTATCTGAGTTCAAGAGGCTCAAGATAAACATTGAAATGTTCCTAGATGGCACGGTTCCCAAAGAGCAAATGGATAAATTGAAACAGGAAAACAAGACTACTGAGGAAGTATTAGAATTATTGACCGATGAGACGTAA
Protein Sequence: MANVKNRIPQSSAKKGRSVTKSNTTTSNAIESITVMKKNLKLMTSEDKVLYPNTGVQTKSKSKQLLNGKVNKGSSQNKNLSLMSKSGRIKKKCKEKLKLVNNILKSELLIGDTDSEPISKISIVKKITLFNNNNIGISDHNQTKGISKNTKAQKLQHRNNDKRIISKVGDQQKRHSKSHAKTNHTTDSVYQCDYCSKTFGSKKLIERHIFGHLNVKPFKCQHCPKKFRYDINMQVHMMRLHTDDSLDEFRCHICDKIFLFKETLNNHLNDHVRKVNFFKCIFCENKYSESTQLARHEKNHLENGRYQCPMCDMNYGIRNHFEAHLKCHSKNKDYICQYCGKEFLRLNSMHRHVQVCHSGHRIQCPICKKKLKGHLTEHMRTHDKKRPHECPSCKQRFTQSTQLNVHMRSHTGARPYPCRICGRKFSHSNALMLHIRRHTGEKPFPCAMCPLTFSQLPHMKAHMKNIHGKENAYKCIKCAKFFKLKVDLERHLKVCTAGEKVLSFEEKIQASVQYEEIEAESAMSLSRMRYLLALLLTMIATKDKLKYLGFNKRLIDDLLIESLEAMRVKPCKDDSLSEFKRLKINIEMFLDGTVPKEQMDKLKQENKTTEEVLELLTDET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01282690; iTF_01281575;
90% Identity: iTF_01282690;
80% Identity: -