Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757266.1:8036439-8040353[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00032 0.027 15.7 0.9 1 23 303 326 303 326 0.96

2 12 0.03 2.5 9.5 2.0 1 19 350 368 350 372 0.90

3 12 3.8e-05 0.0033 18.6 3.8 2 23 378 399 377 399 0.97

4 12 0.00055 0.047 15.0 1.9 1 19 403 421 403 426 0.91

5 12 0.0024 0.21 13.0 2.1 1 23 429 451 429 451 0.94

6 12 0.00014 0.012 16.8 0.1 3 23 538 558 537 558 0.96

7 12 0.34 29 6.2 0.2 2 23 578 600 577 600 0.96

8 12 1.1e-06 9.6e-05 23.5 4.1 1 23 606 628 606 628 0.98

9 12 0.0015 0.13 13.6 1.7 2 23 634 655 633 655 0.96

10 12 0.05 4.3 8.8 2.8 2 21 662 681 661 684 0.93

11 12 3.1 2.6e+02 3.2 2.4 1 19 692 710 692 711 0.87

12 12 0.025 2.2 9.7 1.6 3 19 724 740 723 745 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00032	0.027	15.7	0.9	1	23	303	326	303	326	0.96
2	12	0.03	2.5	9.5	2.0	1	19	350	368	350	372	0.90
3	12	3.8e-05	0.0033	18.6	3.8	2	23	378	399	377	399	0.97
4	12	0.00055	0.047	15.0	1.9	1	19	403	421	403	426	0.91
5	12	0.0024	0.21	13.0	2.1	1	23	429	451	429	451	0.94
6	12	0.00014	0.012	16.8	0.1	3	23	538	558	537	558	0.96
7	12	0.34	29	6.2	0.2	2	23	578	600	577	600	0.96
8	12	1.1e-06	9.6e-05	23.5	4.1	1	23	606	628	606	628	0.98
9	12	0.0015	0.13	13.6	1.7	2	23	634	655	633	655	0.96
10	12	0.05	4.3	8.8	2.8	2	21	662	681	661	684	0.93
11	12	3.1	2.6e+02	3.2	2.4	1	19	692	710	692	711	0.87
12	12	0.025	2.2	9.7	1.6	3	19	724	740	723	745	0.94

Sequence Information

Coding Sequence: ATGGAGCAAGCGACCATTAGTGTTCCGGACTCCGAGTTCATGTACCCGGTGCTCCTCATTCCTAAAAGATGTACAACGTTGGAAACCAGCTGTGACGTGACGGATAACGTCTTCATCGACCTGAACATCACGTCTCCAGACACGGAAGGTAACGAGATGTGCATTTACACCGGGTTTTGTAACGTGAAGCTGATAGACAGTTACGACGTCAATGTTCAACAAGTGGGGTCTCCGGCGGACGATTCGGGGTTCGACAATGATAATATCGCGTCTGTCGAACCGGGAAACCAAGTCTATCCATTTAACCAGTCGCAAGTCTGGATAGATCCAGTCAGGAGTCCTTACGTGTACAACCAGTACGACGCGACGGAGACTCAGGAGTATTCCGTTCGCCATCAGCAGACGCGATCAGGGCATAATATTACCGTTGAGCAGCACAACACGTATATAACGCAGAATGTGTACAACTATAAGGAGTCGATACATTACTCGCCAGCTGAAGATTTCGAGCATAAAAAGTTTAGAAAAGTGCAGACGGAGACCGGTCAGTCGTCTAATACAAATGACGGCAATAATTTGAACTTGTATGAAGAGGATGAGTTCGAGTGCGGGGTGTTTCTGTCTCAGTTGCCCGAGGAGATAATGAATGAGAAGGAAACTAAGGCAAAGGAGGAGATGAAGTACATAGGCATTCAGAGTGAGAATGAAGCGTTGAAGCAGCTGATGTCATCTGATATTCAGTCTGTGTCGAAGCAGCGGAAGACGATATTATTTCTGGGGCATGATTCTCATTGTGGACAGACGATTCAGAAGATAGCGGTCAATGACCCGACGCTGGTGTGTTCTGGAGGCGGAGAGATCGATCATGAAGTTGTCATTGACGATGTGGATTCTCACCACAAAAGATATCAGTGCGACAAATGCAAGCAGATATTCGATCAAATATCTGCCTTCAAGCAGCACATGGTGAGCAGTCACCGAGCTCCACGATCCTCCACATCCTACGACGTGGACTCATCCAGTTCCAACTCAGTGAGCGAAGTCAAATTCATGTGCAGCGAATGTGGAAAGAATCTCAAGAATCAAGAGAAATTCGAACTCCACTGCATGGGCCACGGTGACCCAGAACTAGAATGTAACAAGTGTCATAAAGTCTTCGCTTCCAAATTCACCCTTCGTACTCATCGAAAAATACACTCAAGAAAGTACGCGTGCACTCACTGCAGTAAATCGTACTCGGACGCCGAGGATTTGAGGGCACATTGCGCTAAAATCCACTACATCTTTATGTGTGAGCATTGCGACTACGTGTCGAGCAAGCTGTCTCATTTGAAGCTGCATGAAGTGATACACTGTGATAAGACATTCCCCAAAGAAGACAGCGATAATGATTTCACTGAATCCTTGATAGATGAAGTCATGAGCGACGCTGACATTATGGCTCCTTCGCCAGGCGACGACGAAGACTTTAAAATCGAAAACGACATATTGGAGGATTGCACTGATGACGAAATACAGAAGGCAGACTCTGTTATCGCCAAAGTGATGTCGAACAAGATATTCTTGTTGCACGCCAAAAAGGCTAGGCGACACAGGAGATACAATAAGGCCTGCGACGTCTGCCAAAAAGTCTTCGACCGCGTCGGAGACCTGAAACGTCATCTCATCGAGCACATCATTCGCAGCACCCTCGCCAAGACGCCCGTCAGCAAGAACGGCGCCCTCAACATACAGTGCGAAGTCTGCCAAGTCGAGACCTTCACCAAGATTGACAGGTACAAAGCCCACTTACGAGAACACGCCAAactcaccctgtataaatgcACCTTTTGCGACAAATCTTTCAGCGACTCTTCCAACTTttctaaacacaaaaaaatacacggaACTAAATACCTCCAGTGTGATTTATGTCAACGAAAATTCAACTCTAAGAAGATGATCACACAACACATGGAGTATCACAACAAAAACTCGCCGATCAAGTGTCAATTTTGCGATAAACTCTTCTACTTTGAATCGATGCTGAATAAACACGTCAAATGCGCTCACACTAGAGAAATGTCCAATAGATTTCGCTGTAGATTCTGTCATGAGTACTTCAAGACTTTAAAAGAGAAATGGGACCACGAATGGTCTGTCCATAATGTCAGGAAGATGATCGTGGACTGTCTGATCTGTGGTTCCAAGTTCAGGAAATATTCAGAGTTGAAACGGCACTGTATCGATGCCCATAACATGGAAATTCCTCCCGCTAAGAAACTGTTGAGGAAAAAAAGGTACAAGTAA
Protein Sequence: MEQATISVPDSEFMYPVLLIPKRCTTLETSCDVTDNVFIDLNITSPDTEGNEMCIYTGFCNVKLIDSYDVNVQQVGSPADDSGFDNDNIASVEPGNQVYPFNQSQVWIDPVRSPYVYNQYDATETQEYSVRHQQTRSGHNITVEQHNTYITQNVYNYKESIHYSPAEDFEHKKFRKVQTETGQSSNTNDGNNLNLYEEDEFECGVFLSQLPEEIMNEKETKAKEEMKYIGIQSENEALKQLMSSDIQSVSKQRKTILFLGHDSHCGQTIQKIAVNDPTLVCSGGGEIDHEVVIDDVDSHHKRYQCDKCKQIFDQISAFKQHMVSSHRAPRSSTSYDVDSSSSNSVSEVKFMCSECGKNLKNQEKFELHCMGHGDPELECNKCHKVFASKFTLRTHRKIHSRKYACTHCSKSYSDAEDLRAHCAKIHYIFMCEHCDYVSSKLSHLKLHEVIHCDKTFPKEDSDNDFTESLIDEVMSDADIMAPSPGDDEDFKIENDILEDCTDDEIQKADSVIAKVMSNKIFLLHAKKARRHRRYNKACDVCQKVFDRVGDLKRHLIEHIIRSTLAKTPVSKNGALNIQCEVCQVETFTKIDRYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGTKYLQCDLCQRKFNSKKMITQHMEYHNKNSPIKCQFCDKLFYFESMLNKHVKCAHTREMSNRFRCRFCHEYFKTLKEKWDHEWSVHNVRKMIVDCLICGSKFRKYSELKRHCIDAHNMEIPPAKKLLRKKRYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00408719;
90% Identity: iTF_01282715;
80% Identity: -