Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757281.1:5723452-5735495[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9.6e-05 0.0082 17.4 1.3 1 23 241 263 241 263 0.98

2 12 3.2 2.8e+02 3.1 1.3 1 23 270 293 270 293 0.90

3 12 3.7 3.2e+02 2.9 3.2 1 23 297 319 297 319 0.93

4 12 0.63 54 5.3 5.5 3 23 326 346 324 347 0.95

5 12 0.0014 0.12 13.7 0.2 2 23 353 375 353 375 0.95

6 12 0.97 83 4.8 0.7 2 21 387 406 387 407 0.93

7 12 0.0013 0.12 13.8 0.1 3 23 419 439 418 439 0.97

8 12 0.0067 0.57 11.6 0.2 2 23 451 473 450 473 0.96

9 12 1.8e-06 0.00016 22.8 2.0 2 23 487 508 486 508 0.97

10 12 3.5e-08 3.1e-06 28.2 0.8 1 23 514 536 514 536 0.99

11 12 2.9e-05 0.0025 19.0 0.8 1 23 542 564 542 564 0.96

12 12 1.7e-07 1.5e-05 26.0 1.8 1 23 570 593 570 593 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9.6e-05	0.0082	17.4	1.3	1	23	241	263	241	263	0.98
2	12	3.2	2.8e+02	3.1	1.3	1	23	270	293	270	293	0.90
3	12	3.7	3.2e+02	2.9	3.2	1	23	297	319	297	319	0.93
4	12	0.63	54	5.3	5.5	3	23	326	346	324	347	0.95
5	12	0.0014	0.12	13.7	0.2	2	23	353	375	353	375	0.95
6	12	0.97	83	4.8	0.7	2	21	387	406	387	407	0.93
7	12	0.0013	0.12	13.8	0.1	3	23	419	439	418	439	0.97
8	12	0.0067	0.57	11.6	0.2	2	23	451	473	450	473	0.96
9	12	1.8e-06	0.00016	22.8	2.0	2	23	487	508	486	508	0.97
10	12	3.5e-08	3.1e-06	28.2	0.8	1	23	514	536	514	536	0.99
11	12	2.9e-05	0.0025	19.0	0.8	1	23	542	564	542	564	0.96
12	12	1.7e-07	1.5e-05	26.0	1.8	1	23	570	593	570	593	0.97

Sequence Information

Coding Sequence: ATGGAAGAAGTACTTGCGTGTCGTATTTGCTTATCGACAAACACCAAACTTTTCAATATATTCAAGTATGGGCTAAACATAGCGTATGAGTCGCTCACCCAAATTGGgATGCCAGAATTAGATGGCCTCCCTCAACACGTCTGCAGTGTGTGTAGTGCGCTCCTGATCAAATGTTACAAATTTAAAATGATGTGTGACAGCTCACGCGATAGACTCGTATGTGCAAAACTGCAGCACCAGctcACAATGGACTGCATAATACGCTTGAAAAAACCATCACCATTCACGTTTTCAATAAAAACCAAtgacacaatattttattacgcttcAGACAGTGAAGATCCTCCTGAATTATCAACACAGATAATCAAAGAAGAGAGGGAGTGTACTTTTGATGACCGAGACGATTATAAAGTCAAAAGCGAATCCAGCGATGATGAACCGCTGCCgatgttgaaaataaaattgtccGCTGAAAGGTCTGCTAAAAAACCCAAAGTCACTAAGAAACCTGTCAAGAAAAAGGTTACTGTTAAGAAAAAGTCTGAAGTGAAGAAAACTATCAAACAAAAACCCAAAAAGCAAAGCGTACCAACAAAAAAGCCGGTTGAAACTGATGAGCTTCCAAAAGATGAAGTTGATTTAGTGGAGTTAACGAAAGAACAACAGCTAGAAGAGGTTTTATCTAGGAAGACATCGTTAAATTACTTGAGTTCGTTTTATAAGTGCGAGCTGTGTTTCAAAGGATTTTCATCGGAGGGCACTTATAAGAATCATATGGTGCGGCATGATCCGAGTTCCGGTGCGCACGAGTGTGATATATGCCACCTCCGGTTGCAAGATGGCCGCGCGATGCGCAGTCACGTGTCCAGGTTGCACGCATGGAACTACGTCTGTAAACTGTGCAAACACATCTCTAAATCTAAgcaCTTGGCAATATTACACTCAAAATGGCACAGCGGTCACACGTTTGGATGCAAGTTCTGCGGTATGCGGTTTACAAAGAAAACAAGCCACTTATCCCACGTACGCATACATCATCCGTCGGAGCATAACAGTTGTGACGTGTGCGGGAAATCGTTTATAGGCGATTATGGGCTGAAGATGCATAAGCAGAAAGCGCACAGAGATGTCCAGTCGGAACCAGTGACAAAAAATCGTTGCGAAAACTGCAAGGTACATTTCTTAAATGCGGAAGCGTTTAAACGGCACACGAACGGCGAAGATGGGCTGTGTGATAAGAATTTGAGAGCTTGTGCGAAATGCGGTGAGACATATATCAGTGAGTTTGAACTCAAGGAACACttgaaacagcattctaaagaaGAAATCAAGAAGAAGCAGAGTATGAAGTGTGAAGAATGCAACGTAACGTTCTCGGTGGCGCGTCTGTACGCGCTGCACTACCAGCGCGAGCACCTGCGCCTGCAGCAcgcggcggcggcgcgcgcgCCCGTCGTGTGCGAGATCTGCGGCAAGAAGTGTAAGACAAACACAAACCTCCGCCTCCATCAAAGAGTACACACGGGCGACCGTCCGTACCAATGTACGGAGTGTCCTAAGACTTTCAGTGTGTCGCAGAGTTTGCAGATACACATGCGCACACACAGCGGTGAGCGGCCATACTTGTGTCAGCACTGTCCTAAAGCTTTCAAAGCGCAGCCGAATCTTATCAGACATTCACGAGTGCACACGGGGGCGAAGCCCTACGCGTGCTCGCACTGCGGCAAGTCGTTCTCGCAGTCCAACTCCATGAAGGTTCACATACGCACCGTGCACCTCAAACTACCCGCACGATCCAGCTTAGATGCTGATTTATTGTAA
Protein Sequence: MEEVLACRICLSTNTKLFNIFKYGLNIAYESLTQIGMPELDGLPQHVCSVCSALLIKCYKFKMMCDSSRDRLVCAKLQHQLTMDCIIRLKKPSPFTFSIKTNDTIFYYASDSEDPPELSTQIIKEERECTFDDRDDYKVKSESSDDEPLPMLKIKLSAERSAKKPKVTKKPVKKKVTVKKKSEVKKTIKQKPKKQSVPTKKPVETDELPKDEVDLVELTKEQQLEEVLSRKTSLNYLSSFYKCELCFKGFSSEGTYKNHMVRHDPSSGAHECDICHLRLQDGRAMRSHVSRLHAWNYVCKLCKHISKSKHLAILHSKWHSGHTFGCKFCGMRFTKKTSHLSHVRIHHPSEHNSCDVCGKSFIGDYGLKMHKQKAHRDVQSEPVTKNRCENCKVHFLNAEAFKRHTNGEDGLCDKNLRACAKCGETYISEFELKEHLKQHSKEEIKKKQSMKCEECNVTFSVARLYALHYQREHLRLQHAAAARAPVVCEICGKKCKTNTNLRLHQRVHTGDRPYQCTECPKTFSVSQSLQIHMRTHSGERPYLCQHCPKAFKAQPNLIRHSRVHTGAKPYACSHCGKSFSQSNSMKVHIRTVHLKLPARSSLDADLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -