Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757282.1:4227759-4231161[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.93 80 4.8 0.8 1 23 62 85 62 85 0.95

2 16 1 87 4.7 0.6 1 20 113 132 113 133 0.95

3 16 0.019 1.7 10.1 0.5 1 23 157 179 157 179 0.97

4 16 0.00064 0.055 14.8 1.1 1 23 183 205 183 205 0.98

5 16 2.9e-05 0.0025 19.0 3.6 1 23 210 233 210 233 0.97

6 16 0.071 6.1 8.3 0.1 1 23 239 261 239 261 0.91

7 16 0.025 2.1 9.8 0.3 1 23 302 325 302 325 0.93

8 16 4.4 3.8e+02 2.7 0.7 1 23 353 376 353 376 0.88

9 16 0.00097 0.083 14.2 1.4 2 23 398 419 397 419 0.94

10 16 0.013 1.1 10.7 0.4 1 23 422 444 422 444 0.97

11 16 2.4e-05 0.002 19.3 0.4 1 23 449 472 449 472 0.97

12 16 0.053 4.6 8.7 5.8 2 23 479 501 478 501 0.97

13 16 0.0087 0.75 11.2 2.4 2 23 509 531 509 531 0.97

14 16 0.0041 0.35 12.2 0.4 1 23 538 560 538 560 0.98

15 16 0.00012 0.01 17.0 4.1 1 23 566 588 566 588 0.99

16 16 1.5e-06 0.00013 23.1 2.9 1 23 594 616 594 617 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.93	80	4.8	0.8	1	23	62	85	62	85	0.95
2	16	1	87	4.7	0.6	1	20	113	132	113	133	0.95
3	16	0.019	1.7	10.1	0.5	1	23	157	179	157	179	0.97
4	16	0.00064	0.055	14.8	1.1	1	23	183	205	183	205	0.98
5	16	2.9e-05	0.0025	19.0	3.6	1	23	210	233	210	233	0.97
6	16	0.071	6.1	8.3	0.1	1	23	239	261	239	261	0.91
7	16	0.025	2.1	9.8	0.3	1	23	302	325	302	325	0.93
8	16	4.4	3.8e+02	2.7	0.7	1	23	353	376	353	376	0.88
9	16	0.00097	0.083	14.2	1.4	2	23	398	419	397	419	0.94
10	16	0.013	1.1	10.7	0.4	1	23	422	444	422	444	0.97
11	16	2.4e-05	0.002	19.3	0.4	1	23	449	472	449	472	0.97
12	16	0.053	4.6	8.7	5.8	2	23	479	501	478	501	0.97
13	16	0.0087	0.75	11.2	2.4	2	23	509	531	509	531	0.97
14	16	0.0041	0.35	12.2	0.4	1	23	538	560	538	560	0.98
15	16	0.00012	0.01	17.0	4.1	1	23	566	588	566	588	0.99
16	16	1.5e-06	0.00013	23.1	2.9	1	23	594	616	594	617	0.96

Sequence Information

Coding Sequence: ATGCCGCACTTAGGTGACGGAAGCGGCACAGTAACAGAAGAAAAAGTGCTTCCAGTTAAAGAGGAACCGAAATCAGGAGTGATTAAGAGAAAAAGACAGCCTAATAACGAAAGACACGCCAGAGAAAGTGCCACGACAATCATACTCAACACGAACATGTTTCCGTTCAAATTCAACAGTCAATTTAAGTGTTTCTACTGCCCAAGCCAATTCTTGAGCATGCCGCAACTCACGCTACACGTCGAGACAAAACACGCAGACGTTTCGGAAGTAGATTTAAAAAAGTCATTCGGTAAAGACGGTCTCAACAAACCAGTCAAAGTTAACGTACTGAACTACCGCTGTAAACTATGCAGCGATGAACTATCACATTTTGAAGATCTAAAGCAACACCTGATTTGTAAACACGAGAAGAGTATACAACTGGGCAATGAAGGCATCTTACCCTACAAGATCACGGAGAACGAATTCATTTGCGTTCTGTGCGAGAAAAATCTGGAGCAGTATAAAGTTTTGAACAGACATATGAACCAGCATTACGCTAAATTCAGATGTACCCAGTGTGAGGCCGGTTTCGTTACCAACCAACGTCTAAAAAGACATCTATCTTCACATAAGCAGGGCAGCCACCAGTGCGATAAGTGTGATAGAGTGTATAGCAAATTCGATTCACTCAAGTCCCATATACGTAGGACACATTCGGATGTAGCGTGTTATATGTGCCCTTACTGCGGTGTTGCTCTTAGTAACAATCAAAGAGCGGAGCACTTGAGAACTGCACACGGGAAACAGTTGCGAAAAGATTTTACAGGTGACGCAAAAACAAAAGCCGAGCGTCTAAGAGAGACCGCCGCCGAGTTGGTCCACTGCACCAACGTTTGCCCTTTCAAATTCCACGGACAGTTCTTGTGTCTATATTGTCCTACTCGATTCGAAAAGATGCCAGACCTAGTGCGGCACTTCAAAGTTGACCATAAAGATGCTACCGTCCACGATACCAAAAAAGGAATAGCCAAAAATACGATTACAGTACCGCTAAAAGTCAACATTTTGGATTACGACTGCAATTTTTGCTAcggaaactttttaaaattcgaAGATTTAAAACGACATCTCATTGACGAACATAAGAAACAAATCTGCCTTGAAAACGATTTCGTTATGGCTTGTATTATTACGGAAAATGAATGTATCTGTGTGGTCTGCGATAAGAAGTTTGAAGACTACCGTTCTCTGTCTAGGCATTGGAACGAGCATTCCAAATTTATGTGCGAGCAATGCGGCGCTGGTTTCGCTTCGGAATTACGTTTACGCCATCACGTGTCTAGCCACGAGACAGGCAGTTATCCGTGTGAAGAATGCGGGAAAGTTTTTTCACACCCGTTGCTAAAGAAGCAGCACATCCGCTTAGTACATATTCGGAGTAAGGACGTTAAGTGTTCGCAGTGCTCAGAGACGTTTGAGAACCACCATAGAAGGATGAGGCACATGAAAACCGAACATGGGGTAAAGCCAAAGGAACGCAAGTGTCGATTCTGCTCAAAAGTGTTCTATAGCTCCACAACTGTCCGAACTCACGAACGAAGGGTGCATTTGATATCGACTACCAAATATGTGTGCGATATCTGTGATTACAAAGCGTACAGTAAATTCCGATTGGCTACTCACATGATCAGCCACACTGGTGTTAAGAACTTCAAGTGTGATGTGTGCCTCAAAATGTACAGCACAAGGAAATGCCTGAAGGAACATATGAAAATACACAATAATGTCAGAAACTACGTTTGTCAGTACTGCGATAAAGCGTTTATTCAAAGCACCAGTCTGAAGTACCATTTGAGGTCGCACCACAAGGAATTTTCTGTGTAA
Protein Sequence: MPHLGDGSGTVTEEKVLPVKEEPKSGVIKRKRQPNNERHARESATTIILNTNMFPFKFNSQFKCFYCPSQFLSMPQLTLHVETKHADVSEVDLKKSFGKDGLNKPVKVNVLNYRCKLCSDELSHFEDLKQHLICKHEKSIQLGNEGILPYKITENEFICVLCEKNLEQYKVLNRHMNQHYAKFRCTQCEAGFVTNQRLKRHLSSHKQGSHQCDKCDRVYSKFDSLKSHIRRTHSDVACYMCPYCGVALSNNQRAEHLRTAHGKQLRKDFTGDAKTKAERLRETAAELVHCTNVCPFKFHGQFLCLYCPTRFEKMPDLVRHFKVDHKDATVHDTKKGIAKNTITVPLKVNILDYDCNFCYGNFLKFEDLKRHLIDEHKKQICLENDFVMACIITENECICVVCDKKFEDYRSLSRHWNEHSKFMCEQCGAGFASELRLRHHVSSHETGSYPCEECGKVFSHPLLKKQHIRLVHIRSKDVKCSQCSETFENHHRRMRHMKTEHGVKPKERKCRFCSKVFYSSTTVRTHERRVHLISTTKYVCDICDYKAYSKFRLATHMISHTGVKNFKCDVCLKMYSTRKCLKEHMKIHNNVRNYVCQYCDKAFIQSTSLKYHLRSHHKEFSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01282660;
90% Identity: iTF_01282660;
80% Identity: -