Paur000163.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- CAUZXH010000032.1:10930-23580[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 2.4e-05 0.002 19.3 0.3 1 23 121 143 121 143 0.98 2 31 0.0021 0.18 13.2 0.5 2 20 173 191 172 193 0.92 3 31 0.00016 0.013 16.7 0.3 2 23 222 244 221 244 0.96 4 31 8.2 7.1e+02 1.8 0.4 5 21 269 285 266 286 0.88 5 31 0.06 5.1 8.6 0.7 1 23 296 319 296 319 0.96 6 31 0.0071 0.61 11.5 0.3 1 23 335 357 335 357 0.95 7 31 0.00023 0.02 16.1 0.8 2 23 399 421 398 421 0.95 8 31 0.0002 0.017 16.3 0.6 2 23 465 487 464 487 0.95 9 31 0.0002 0.017 16.3 0.6 2 23 531 553 530 553 0.95 10 31 0.0002 0.017 16.3 0.6 2 23 597 619 596 619 0.95 11 31 0.00077 0.066 14.5 1.7 2 23 662 684 662 684 0.97 12 31 0.012 1 10.8 1.5 1 23 734 757 734 757 0.96 13 31 0.0017 0.15 13.4 0.1 1 23 813 835 813 835 0.97 14 31 0.012 1 10.8 5.5 2 23 847 868 846 868 0.96 15 31 0.072 6.2 8.3 2.7 2 23 880 901 879 901 0.96 16 31 0.03 2.6 9.5 1.4 1 23 911 933 911 933 0.98 17 31 0.24 20 6.7 5.4 2 23 963 984 963 984 0.96 18 31 0.00048 0.041 15.2 2.2 1 23 995 1017 995 1017 0.98 19 31 0.0012 0.11 13.9 1.4 1 23 1025 1047 1025 1047 0.98 20 31 0.00079 0.068 14.5 0.4 2 23 1067 1089 1066 1089 0.97 21 31 2.5 2.1e+02 3.5 0.8 1 23 1107 1129 1107 1129 0.89 22 31 0.15 13 7.3 2.9 1 23 1136 1158 1136 1158 0.97 23 31 0.0052 0.45 11.9 2.5 2 23 1169 1191 1168 1191 0.95 24 31 0.00057 0.049 14.9 0.3 1 23 1213 1235 1213 1235 0.97 25 31 0.013 1.1 10.7 0.1 2 23 1316 1337 1315 1337 0.94 26 31 1.7 1.5e+02 4.0 4.5 5 23 1347 1365 1344 1365 0.94 27 31 0.017 1.5 10.3 0.8 2 23 1376 1398 1375 1398 0.95 28 31 2.3 2e+02 3.6 4.1 2 23 1415 1433 1415 1433 0.90 29 31 0.19 16 7.0 1.6 2 21 1437 1456 1437 1457 0.93 30 31 0.27 23 6.5 0.4 2 23 1506 1527 1505 1527 0.93 31 31 0.0081 0.7 11.3 0.6 2 23 1538 1560 1537 1560 0.96
Sequence Information
- Coding Sequence
- ATGAATATTTGCTTCAGCATCACACCTCCGCCAGCACCAAACAGACAGAGCAGCGACTCTGCTTTCTCCTCCCAGACAGATGTTTCAAACCAGACCAAGCCGTCTATCTCTCACGAGAACACGTCGACGCCTATCGGCCGCAGTCGTAAGCGCAGCCGCGAGAGCATAGACAACACGTCTGCGAGCAGCCGGTCGCAGGACCGCGCGCCCGCCGCTAAGCGGGTGTCGGAATTGAGAGACGCACAGAAGAAACAACGGCATAACAAGTCATACGAAGATGACTCGGATTACGAAGACCACATGTCCACCTCCCAGTTCTCAGCGGGCACTGACTCGGACGAGCCGCTGCTCAGCAACGCTTACAAGTGCAAGTACTGCGACAGAGCGTTTCCGAGCGCCAAGAGCCTTGCTATACACGGCAGGCAGCATAAGAAGGAGAGTCTGGGGGAGAACCAGGTAGTGAGCATCCCGAAGCCGTCAACACCTCAAGACGCAACGGACGAGGAAGACAAGCTGTCATGCGACAGGTGCGGCAAGACCTTCAAGCTGAAGATCATGCTGAAGCGGCACAAGGACATGTGCGGAGTGGTCGCGGAGGTCTCGCCGCAGAAGGAGCTGCTCATTTCGCTGGAGCCCATTGACGCGATCCAACCAAGGAAGCTCGAATGCGAAATCTGCACGTCAAAGTTCAAAACCATAGACAACCTAAACAAGCATTTACGGGTGGTCCACGCGGCGGCACCTAAGCAGGACCCTTCCCCGATCAAAGAGAGCAAAGACAAGAAAGTGACCGTACCTTGCATATTCTGTAGGAAGTCATTTGATGATTACTACGTGTATACGGCTCATCACAACAGCTGTAACAAAAGAAAGGAGATGGATAGTTTCACCTGTCCGGTGTGTAAACGTATGACTGGGAAGCGTGCTGCCTTCTTCACTCATGTGAAGAATCTTCACTTCGAGCGGAGTCTGTCTGGGAAAGAGGAACCCAAAACGGAGTCGTTCGATTGCCGCATGTGCAGCAAAAGGCTGACGTCGCAAGCGCAGCTGATAACGCACCTGGCAGCGCACATGTCGAATATTGATGAGCCTGATGTGCACGCTGATGATGAGTCCAGAGCAAGCACATTAGAAGACGGCGGCTCAGTGACGTCCGAATACGGCAGCGGAAAGTACGTGTCGAACGGGCCGCTCAGTTGCAGCGTCTGCGAGAAGCGGTTCACGTACAGGAAGGCGCTGGTCACGCACATGGAGAAGATGCACGAGGGCGTGGAGATACCGGTCAAGGTTGAGCCGCCTGATAAGGACCCGGATCCAGACCAGACTATAGAAGACAGCGGCTCAGTGACGTCAGAGTACGGCAGCTCGAAGTACGTGTCGAACGGGCCGCTCAGTTGCAGCGTCTGCGAGAAGCGGTTCACGTACAGGAAGGCGCTGGTCACGCACATGGAGAAGGTTCACGAGGGCGTGGAGATACCGGTCACGGAAGAGCCGCCTGATAAGGACCCGGATCCGGATCAGACTATAGAAGACAGCGGCTCAGTGACGTCAGAGTACGGCAGCTCGAAGTACGTGTCGAACGGGCCGCTCAGTTGCAGCGTCTGCGAGAAGCGGTTCACGTACAGGAAGGCGCTGGTCACGCACATGGAGAAGGTGCACGAGGGCGTGGAGATACCGGTCATGGAAGAGCCGCCGAATAAGGACCCGGATCCGGATCAGACTATAGAAGACAGCGGCTCAGTGACGTCAGAGTACGGCAGCTCGAAGTACGCGTCGAACGGCCCGCTCAGTTGCAGCGTCTGCGAGAAGCGGTTCACGTACAGGAAGGCGCTGGTCACGCACATGGAGAAGGTGCACGAGGGCGTGGAGATACCGGTCAAGGAGGACCCAAATCTGGACCAGAGCAACCCAGATCTCCTGAGCGAGACGCTGGCCGCGGCGCCGTCGGACTCGGAGTCCAGCGACGAGGACGGCTCGGAGCGCACGTGCGACATCTGCGAGAAGGAGTTCTCGTACAAGCGCCTGCTCGACCAGCACAAGCGCACCAAGCACAACCTCTCCTCGGGCACCAAGCGCGCCAAGATCACGCTCAAGGACTGCTCGGTTCGGTGCCTCATCTGCGATCTAGAGATGAAAGTGAGCGACATAAACGCGCACAACCAGAAACACATCTCCGTGAACATAAAGCCGCGCAACGTGTACACTTGCGCCGACTGTTCAGACAAGTTCAAGAGCTGCAGCGCGCTGGCTAACCACATCAAGTTCGTGCACAGACTGAAGCAGCCCCGCGCTCCGCTGGCGCCGCGTGCGCTGGAGGGCGGGTCGGAGCTGGCGGATTTTTGCGAGGTCGTTGTGACTAAGGCGGAACCCCTGGACGCGCTCCAGGGTCACAACGGCAAGGGAGCGGTTCCGTCGTTAGCGGTGAACGCCACCGGGTTCACGTGCCCGCTCTGCGGGAAGGTGATGGGCACGCTCGTGTCGCTCAAGCGGCACGTCAACTGGCACACGTACCGAGGGAAGGAGCTCGAGAGGAACATCGAGTGCTTCGTGTGCAAGGAGACGTTCCGTTTCCAATGCCACTTCCGGCTGCACATGCGAGGCCACTACACCGACACCAACTTAGACCCCAAGCACCTCACGTGCCCCATCTGCCACCGCAAGAGCAAGCACCTCCGCGCGGCGCAAGCGCACATGAACTTCCACAAGCAGACGCGGTTCAACACCGCGGATTACCAATGCGCTATCTGCAAAAGAGTGTATCAACACAGAAAAGTATACCTATCGCATATGGCTATACACTTTAAAAAGGGAGAGAGCGGGATGAATACCATAGTAGGAGACGCGTTGCCGAATAATGTGGACAAGACCAGATTCGACGGCACCAACACTTGCCATATCTGCGGAAAGGTGTGCGACTCTGAAAACTCACTGAAATGCCACGTCCGCTGGCACAACTCGAAATCATCTCTCTACGGAGCGAGACACGAGTGCTTGATCTGTAATCTTGTCTTCACGAACAAGCGGCGATTGGAGCTACATACCCGAACTCACTATGAGGATGAAAATGGACCATACAAGTGTAACGTTTGCGGAAAGGGTTTCATCGATGAGGGCTACCACCGGAGGCATCAGAAGGGCCACAACTTTGACCACCAGGTGCATAAGGATAGGATCGACAAGCTGAGGAAGGATAAGGTGAAATGCCCCATCTGCGCCCGCTTCTACCCAGACCTGATACACCTCATTCGACACTTACGTCGCACTCACCCTGAGAGTAAAATGATAAAGACGGATCCCGACGCGCCCCCTCCAACATACTTCTCGTGCAAGCTCTGCGCTAAAGTGTTCCTAGACGAACGAAGGTTCCGCAAACACGAGGAGGCCCACGCGAGGAAACCGCTCTTCTTCAAATGCAAATTCTGCGGGAAAAACACCATCTCCCTCAAGAACCACAACGTCCACATAAAGGGCCATCTGACGCAAAAATACTTCGACAATCCTCTCAAGTGCACGCAATGCGACGAAACGTTCGTCAAGGGATACGATCTCCACCACCATCTGAGGGACGTCCATCAGATCAACGAGACGTGGATAGCGGAACGCACCGAGCCGACGCTCAGCGGCCCGCTCAAAGAATTCCAATGCTCGATCTGTCTGAAAGTCCTCGCGAGTAAAGGCAACTTCGAACGACATATCGACTATCACAACACCCTGAGATGCAACTACTGTTTCGACTACTTCAGCACCATGAGGTTTTTGGAGGGCCATCTCGCCTTCAGCTGCGATAAAAAGAAACTCATCGGCGATACGGAGACATACCCGAAGAAGATCAAGTGCCAGGTCTGTTATAAAGCCTTCCATTTGCAAGTGAAGCTGGACTGTCATCTCCGCACGCAGCACGGGATCAAAGTGTGCAAAGAGAGGTCCAGCGGCAAGAAAGAGATCGTTTGCGACTACTGCTTCAGAGTGTTCGAAAATGAAGAATCCCTGACGGGCCACAAGATCTACCATAGAACCGTCGGGTACTACGGCTGCATTTACTGCAAACGGAAGTTCAATACTCTGACCTTATACAGAAAGCACAAGAACCACCACCTCGCGCAACTCAACGTAGACAACCCGACGAAGTGCGAGCATTGCGACGAAACGTTCGTCGCGTTCCGGGAGATGATCTACCACATGAGAGACGTGCACGGCGACAGCAAAGAATGGATCGTCATGCCCAAAGACTCGATCGAGGAGACGTGCCAGATATGTAACAAGAGGTTCTTCAACCTTCACAGACATCTAGAATACCACGAGGAGAATAGATGCAAGAAATGCGGCGAGTACTTCTACTCCAGAGTAGACTACGACAACCATCTGTGCTCGATAGAGAGCGACGACGAGGACGCGGTACAGAACGTGGACAGCTCGTCGCCGGCGTACGAGGAGTGTCGGTTCTGCTTCAAGCCGATCACGAGAAAGTCCTCGAAACGGAAACACGACCACATCCACAAAGGCTCCGGCTCGATATCGTGTCGGTTCTGTCCGCTCAAATTCAAAACCATAGACGCGTTCAACATCCACGCGTTCTCTCACCGCAGCCGAAAGTACACAAAGAAGCCTATAAAGTGTCGCAAATGCGGAGAGAAGTTCGTGAAGTACGGACCGTTTATGAAGCACATCAAAAACGTGCACAAGTCGGCGAAGAAGATGCACTACCGGGCGACCGTGCGGCCGGAGCGCTGCGTCGTGTGCGGAGACGACTTCCCGAACCTGCACAACCACTACCGCGCGCATTTGCTCAACCAGTGCCAGCAGTGCTTCAAGTATTTCACATCTTTCAAAGTGTTTTCGCAGCACCACTGCGATAAAGAGGACTCTGATCCGTCCAAAGTGTTCGTATGCGATGAGAATCTCGTCTCTCTCATCAACAACTATATTCCTAAAGACGAGAAAGACGATGAGAAGTTCTACGGCGGTGCCGAAGACGAGGAAGAGGAGGAAATCCCCGAAGCCGCCACACCTGTTACGAATAATGTGGAGCAAAAGTCTGAATTGCTGTCACAAGACGAAGACAGCCAGAACGCCGACCTGGATGCCATGACGTTTTCTCACGACGAAATGAGCCAAGATGAGAAGGAACTCCATCAAATGGTGTCTTCTCCGATAATATCGGACGTGCTATCACTCTACCAGCAAAGTCAGAAAGACGACCCGAAGCAAGCTGTGAATGACAAAGATGTAGTTTCTCTGATTGACGATGACGACTCGATGGATATGACTGTTATCAATATTCCTGTCATCACTATTGATTAG
- Protein Sequence
- MNICFSITPPPAPNRQSSDSAFSSQTDVSNQTKPSISHENTSTPIGRSRKRSRESIDNTSASSRSQDRAPAAKRVSELRDAQKKQRHNKSYEDDSDYEDHMSTSQFSAGTDSDEPLLSNAYKCKYCDRAFPSAKSLAIHGRQHKKESLGENQVVSIPKPSTPQDATDEEDKLSCDRCGKTFKLKIMLKRHKDMCGVVAEVSPQKELLISLEPIDAIQPRKLECEICTSKFKTIDNLNKHLRVVHAAAPKQDPSPIKESKDKKVTVPCIFCRKSFDDYYVYTAHHNSCNKRKEMDSFTCPVCKRMTGKRAAFFTHVKNLHFERSLSGKEEPKTESFDCRMCSKRLTSQAQLITHLAAHMSNIDEPDVHADDESRASTLEDGGSVTSEYGSGKYVSNGPLSCSVCEKRFTYRKALVTHMEKMHEGVEIPVKVEPPDKDPDPDQTIEDSGSVTSEYGSSKYVSNGPLSCSVCEKRFTYRKALVTHMEKVHEGVEIPVTEEPPDKDPDPDQTIEDSGSVTSEYGSSKYVSNGPLSCSVCEKRFTYRKALVTHMEKVHEGVEIPVMEEPPNKDPDPDQTIEDSGSVTSEYGSSKYASNGPLSCSVCEKRFTYRKALVTHMEKVHEGVEIPVKEDPNLDQSNPDLLSETLAAAPSDSESSDEDGSERTCDICEKEFSYKRLLDQHKRTKHNLSSGTKRAKITLKDCSVRCLICDLEMKVSDINAHNQKHISVNIKPRNVYTCADCSDKFKSCSALANHIKFVHRLKQPRAPLAPRALEGGSELADFCEVVVTKAEPLDALQGHNGKGAVPSLAVNATGFTCPLCGKVMGTLVSLKRHVNWHTYRGKELERNIECFVCKETFRFQCHFRLHMRGHYTDTNLDPKHLTCPICHRKSKHLRAAQAHMNFHKQTRFNTADYQCAICKRVYQHRKVYLSHMAIHFKKGESGMNTIVGDALPNNVDKTRFDGTNTCHICGKVCDSENSLKCHVRWHNSKSSLYGARHECLICNLVFTNKRRLELHTRTHYEDENGPYKCNVCGKGFIDEGYHRRHQKGHNFDHQVHKDRIDKLRKDKVKCPICARFYPDLIHLIRHLRRTHPESKMIKTDPDAPPPTYFSCKLCAKVFLDERRFRKHEEAHARKPLFFKCKFCGKNTISLKNHNVHIKGHLTQKYFDNPLKCTQCDETFVKGYDLHHHLRDVHQINETWIAERTEPTLSGPLKEFQCSICLKVLASKGNFERHIDYHNTLRCNYCFDYFSTMRFLEGHLAFSCDKKKLIGDTETYPKKIKCQVCYKAFHLQVKLDCHLRTQHGIKVCKERSSGKKEIVCDYCFRVFENEESLTGHKIYHRTVGYYGCIYCKRKFNTLTLYRKHKNHHLAQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDSKEWIVMPKDSIEETCQICNKRFFNLHRHLEYHEENRCKKCGEYFYSRVDYDNHLCSIESDDEDAVQNVDSSSPAYEECRFCFKPITRKSSKRKHDHIHKGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYTKKPIKCRKCGEKFVKYGPFMKHIKNVHKSAKKMHYRATVRPERCVVCGDDFPNLHNHYRAHLLNQCQQCFKYFTSFKVFSQHHCDKEDSDPSKVFVCDENLVSLINNYIPKDEKDDEKFYGGAEDEEEEEIPEAATPVTNNVEQKSELLSQDEDSQNADLDAMTFSHDEMSQDEKELHQMVSSPIISDVLSLYQQSQKDDPKQAVNDKDVVSLIDDDDSMDMTVINIPVITID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -