Basic Information

Insect: Pyrausta aurata
Gene Symbol: -
Assembly: GCA_963584085.1
Location: OY757265.1:525153-532431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.014 1.2 10.6 2.5 2 23 125 147 124 147 0.93

2 12 0.023 2 9.9 2.1 1 23 154 176 154 176 0.92

3 12 1.4e-05 0.0012 20.0 1.8 2 23 183 204 182 204 0.97

4 12 0.00015 0.013 16.7 0.3 1 23 210 232 210 232 0.97

5 12 2.9e-05 0.0025 19.0 0.4 1 23 241 263 241 263 0.97

6 12 4.8e-06 0.00041 21.5 0.2 1 23 269 291 269 291 0.98

7 12 5.4e-05 0.0046 18.2 7.7 1 23 297 319 297 319 0.96

8 12 4.7e-09 4e-07 30.9 0.3 1 23 325 347 325 347 0.99

9 12 6.7e-06 0.00058 21.0 2.4 1 23 353 375 353 375 0.98

10 12 0.00043 0.037 15.3 0.5 1 23 381 402 381 402 0.92

11 12 0.0004 0.035 15.4 0.3 1 23 408 430 408 430 0.95

12 12 2.1e-07 1.8e-05 25.7 0.6 1 23 436 458 436 458 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.014	1.2	10.6	2.5	2	23	125	147	124	147	0.93
2	12	0.023	2	9.9	2.1	1	23	154	176	154	176	0.92
3	12	1.4e-05	0.0012	20.0	1.8	2	23	183	204	182	204	0.97
4	12	0.00015	0.013	16.7	0.3	1	23	210	232	210	232	0.97
5	12	2.9e-05	0.0025	19.0	0.4	1	23	241	263	241	263	0.97
6	12	4.8e-06	0.00041	21.5	0.2	1	23	269	291	269	291	0.98
7	12	5.4e-05	0.0046	18.2	7.7	1	23	297	319	297	319	0.96
8	12	4.7e-09	4e-07	30.9	0.3	1	23	325	347	325	347	0.99
9	12	6.7e-06	0.00058	21.0	2.4	1	23	353	375	353	375	0.98
10	12	0.00043	0.037	15.3	0.5	1	23	381	402	381	402	0.92
11	12	0.0004	0.035	15.4	0.3	1	23	408	430	408	430	0.95
12	12	2.1e-07	1.8e-05	25.7	0.6	1	23	436	458	436	458	0.98

Sequence Information

Coding Sequence: atgAATTCCTTAATATCTACTTATGATAATGTAGCATTCAGTGACATAATTAAGTTATTCACTAACATACAGATAACAGCAGAAAATAGTCTTCCCTTCAATGTATGTATTACTTGCCAGTCAGATGCTATCCACTGCTACAAATTCAGAATAAAATGTGAAAAATCAGACTGTATTTTGCAAtcattattaaaagatgaatttGTATTGAAAGAAGAATCTAATGAATCCAAAAGtgaAGAAGCTCTACCTTATGTAGCTGAAGAAATTATTACTGGTGATATCAATCGCCTAAAAATAGAATCTAATGAAGatttaaAGTTCTCAGTGAACAAAGAAATGTCAAAAGCCAAGTGTACAGAGAAACAAAAGTCTTGTACCTTCTGTTCTAAGAAATTCGGAAAGCTCAAGAATCTCAGAGAGCACGTACTGCAGAAGCACAGTTTGGAAGAGCACTCGCATCCGTGCGGCCAGTGCAAGGAGATATTCTCGTCCGAACATGATCTGCACGTGCATTCCGTCGTGCATAAACCAGGCCCCGTGTGGAGCTGTAATATTTGCCAAAAAGAGTTCAAAGagAAACAAAAGCTACGCAGACACATCCAACGACACATGCACGCGAAGCGCTTCCCGTGCGACGCGTGCGGCAAAGCGTTTTGCGAGATGACCGCGCTGCGGAGACACGCGCGCGTGCACACCGGGCAAGCGCTAGAGAAAAAGTTCGCATGCCAGCTGTGCGATAAGAGGTACAGCGAAAGCAGCGCGCTCTCGCAGCACATGGCGCGCCACAGCGGCGAGCAAGCGTTTGTGTGCGCGTCGTGCGGGAAGGCGTTCGCGACGCCGCGGCTGCTGCGCTCGCACCGGCGCGTGCACGAGGACGCCAAGCCGCACGCATGTCTCTACTGTGACAAGCGGTTCCGCCACGCGTCGACACTTAACACGCACCACCGCACGCACACGGGCGAGAAGCCGTATGTATGTGCAGTCTGCGGCAAGACCTTCATACAGAACTCCAACCTCACGCTGCACATGCGGACGCACACCGGAGAGAGACCCTACTCATGTGCGAAGTGCTCGCTGAAGTTCTCGTCCAGGTCGACACTGAAGGCGCACCAGCGGCGGCATACAGGCGAAAAGCCCTACAGCTGCGATGTCTGTGGCAAGCGGTTCGCGCGGCAAGACCTGAGCGCGCACAAGCGCATGCACGCGGGCGCGCGCCCGCACGCGTGCAGCGCCTGCCCGAAAGCCTTCGTCAACGCCGCGCGGCTGCGGAACCACACACGCATACACACTGGCGAAAAGCCATTCGAGTGTGCCACATGCGGGAAAACGTTCTCGGGCAAGTCGAACCTCGTGCAGCACATAAAGAAACATCAGACGAAGAACAAACAACACAAAGAGAACGTAGTCTTAGTACATCACGTCACCACACCTGTATTTATCGGGGATATTATGACTGAAGCCAAGGAAATCAATCAAACCACAGACACTACTGATACTAATCATCCTGAAATGAACTTTGAGGAGACCAAAACCAATCTTATAGAACTGGCTGAAGATGTACCATTAGAAGTCACTGGCGAACTTGTAGTGCAAGATTGTGATGTAAAGGAAATAATAGTAGTTGACAATAGTCAGTCTGACACCAATCACCAAAGTGCAAATGTATGTGTAAATACTGGAGGTAACTACACCAATGATGTCAATTTAGTGCCCGTGAGTGAAGGCAGCACAGTGAAGTTATATCAACTAGATCAGAACCTGgtacaaaattacaaatacatagtTCTGGAGGACAAGTCACTATCAGCAAAATAA
Protein Sequence: MNSLISTYDNVAFSDIIKLFTNIQITAENSLPFNVCITCQSDAIHCYKFRIKCEKSDCILQSLLKDEFVLKEESNESKSEEALPYVAEEIITGDINRLKIESNEDLKFSVNKEMSKAKCTEKQKSCTFCSKKFGKLKNLREHVLQKHSLEEHSHPCGQCKEIFSSEHDLHVHSVVHKPGPVWSCNICQKEFKEKQKLRRHIQRHMHAKRFPCDACGKAFCEMTALRRHARVHTGQALEKKFACQLCDKRYSESSALSQHMARHSGEQAFVCASCGKAFATPRLLRSHRRVHEDAKPHACLYCDKRFRHASTLNTHHRTHTGEKPYVCAVCGKTFIQNSNLTLHMRTHTGERPYSCAKCSLKFSSRSTLKAHQRRHTGEKPYSCDVCGKRFARQDLSAHKRMHAGARPHACSACPKAFVNAARLRNHTRIHTGEKPFECATCGKTFSGKSNLVQHIKKHQTKNKQHKENVVLVHHVTTPVFIGDIMTEAKEINQTTDTTDTNHPEMNFEETKTNLIELAEDVPLEVTGELVVQDCDVKEIIVVDNSQSDTNHQSANVCVNTGGNYTNDVNLVPVSEGSTVKLYQLDQNLVQNYKYIVLEDKSLSAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -