Paur009648.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757258.1:2899152-2899574[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-08 1.3e-05 25.7 0.1 11 36 3 28 1 35 0.88 2 2 2.5 2.9e+03 -1.1 0.0 13 26 60 72 56 77 0.72
Sequence Information
- Coding Sequence
- ATGTCTGCAATTAGACAAGGGATGAGTTATAATCGAGCCTCGAAAGAGTTTAAAGTGCCAAAGACTACGTTAAGGAGAAAACGCAATGGGGCTTATGTGTATGAAAAGTGTGGCCAACAGCCAGTACTGAATCTTAGCGAGGAGAAACAAATCGTTGCCTGGATACATCGCCTCGCTAGATCTGGGTTGTCGGTGAATAAAGAGCAATTCCTTTACGCTGTCTCTAAAATAGTTAAAGAACTGAATCGTCCAAATCCATTTAGAGATGGCATTCCGGGAAAAAATTGGTTTATGGGTTTCATGAAACGACATCCAACTGTGTCAAGATTTGTGTCACAAGATCTTCCGACTAGTATGGACCAAGTCACAGAAGAAGCACTGCAAACCTGGTTTGATCAAGTGCGCACATATTACGCAAAATAA
- Protein Sequence
- MSAIRQGMSYNRASKEFKVPKTTLRRKRNGAYVYEKCGQQPVLNLSEEKQIVAWIHRLARSGLSVNKEQFLYAVSKIVKELNRPNPFRDGIPGKNWFMGFMKRHPTVSRFVSQDLPTSMDQVTEEALQTWFDQVRTYYAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -