Paur009516.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757258.1:2217896-2230414[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 1.3e-06 28.9 0.1 1 38 65 102 65 109 0.90
Sequence Information
- Coding Sequence
- ATGGAGCCGGTGTTCGGGGTGACCAATCAAGGGAAGCCCAAGTTAGTTTTGGACGAGTACAACTACGTTGTCCACACCATCAGCGGTTTGAAGACACGGTGGCAGTGCTCGAAGCAAAGGTCTACCGGATGTAACGCCAGGCTTTTGACTTGTTCGGaaCCGTTGCAACGTCGGAAGCGGGGGCTGACATGGACTGAAGAAAGCTTAGTTGCTGCTatgaaagcggtgaataaaggtCTCATGTCTGACCACGCTGCAGCTTATAAGTATAACATCCCCAGAAGAACCCTGAGGAACCATTTGGCATCAGGAAGCACAAAGAAAAAACTAGGTCGCGGTGATGATTTTGTACAGTGCGTACCGACGAAAAAGGGTCATCAGATCTTGTACAAAGGGTACACTTATGTTTTCAAAGGCAGATTGCAGTGTGGCGCCGAGCAGTGGTGTTGTTCGTTCCGACAGAAAACAGGTTGTATATCCGTGATTAACATGCAAACTTTCGGGGTAGAGGTCGTGAGAGACTTCCACAATCACAAGAAACCTATGTTCAAAACAGAATTACCGGAATGGGTGTCAATTTATTTCCTGAGGAACACAGACACTGAACAGCGTTGTAATATTTGCCAGAAAATACTGCATACAAGTGAAAAATCACTACAACTTTTGGAGCATATCAAATCAAACCACAAAGAGGTATATGACTTGCACAAAGAAAATCCAGAAGCAACTGTAGGATTTCGAATCGAGTTTCTCCATTTGAACGTTTTAAAAGATGATGGTGATCCAAAAACAGAACCAGTTATCATTGGGGAAATGTGTGAGGCTGAGTCCGAAGAGATAGCTAAGCCAATAACAGAGAAGTTTGATGAAACAATGGATTCACATTTAGTTGTAATGCCAGCTAAGAAAAGGCCACAGCGACGAGAAAGTGAGAACAGAAAAAAAAGCTGGGTTTGGAAATATTTTGTACAGTTAAGCGATATCATCTTCCGTTGTAAAATCTGTGAATCGGTGCTATCTATCAAAGGATGTAACACCAACAACATGAACCGTCATGTGCGGACCAAGCACCCAACTGTATACCAGCTGGAGATTGATGAGAAAAAGCAGGCCTCCGAACAAAACACAAGTGTCGAGGTTCAAGCGGCTCATGTGGAAGAAATTACTACGGACACAGACATAGATATGAGTTTTgAGAGCAAGCCCCAGAGTCTCAAATCGGGCATGCAACGCCGCAGCTGGATCTGGATGTACTTCAACCGAGTAACCAGCACTTTGGCCCAGTGCAAGCTTTGCAACAGAAACATATGCCACGGGGGAAACGCTACAGGCAACATGAACAGACACCTCAAGATGATACATAATAAGACTGGCACGGACCACAATTGGGTGTGGAAAGTGTTCGACAACACAGAGGAAGATTCCTACGCTTGCAAGATCTGCCAATACCGTTGCATCAGACATCTCGACATAGACAAGAGCATATCCAACATACTGAGCCACTTGAAGTTGGCTCACGGAGTCATAAGCGGGGAGCAGATTATCACGAGCATTGAGTGTGAGGATTAA
- Protein Sequence
- MEPVFGVTNQGKPKLVLDEYNYVVHTISGLKTRWQCSKQRSTGCNARLLTCSEPLQRRKRGLTWTEESLVAAMKAVNKGLMSDHAAAYKYNIPRRTLRNHLASGSTKKKLGRGDDFVQCVPTKKGHQILYKGYTYVFKGRLQCGAEQWCCSFRQKTGCISVINMQTFGVEVVRDFHNHKKPMFKTELPEWVSIYFLRNTDTEQRCNICQKILHTSEKSLQLLEHIKSNHKEVYDLHKENPEATVGFRIEFLHLNVLKDDGDPKTEPVIIGEMCEAESEEIAKPITEKFDETMDSHLVVMPAKKRPQRRESENRKKSWVWKYFVQLSDIIFRCKICESVLSIKGCNTNNMNRHVRTKHPTVYQLEIDEKKQASEQNTSVEVQAAHVEEITTDTDIDMSFESKPQSLKSGMQRRSWIWMYFNRVTSTLAQCKLCNRNICHGGNATGNMNRHLKMIHNKTGTDHNWVWKVFDNTEEDSYACKICQYRCIRHLDIDKSISNILSHLKLAHGVISGEQIITSIECED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279462;
- 90% Identity
- iTF_01279462;
- 80% Identity
- iTF_01279462;