Paur009564.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757258.1:2523536-2527329[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-12 4.3e-09 36.8 0.0 2 37 55 90 54 95 0.94 2 2 0.3 3.5e+02 1.8 0.0 7 21 98 112 97 112 0.90
Sequence Information
- Coding Sequence
- ATGACATTTATAGGTGCACCAACGGCTCCAACTGCAGAGCTCGCTTCGTCATGTCCAAGGAAGACCATGCGATCGTCAGAGGAAACCTGTTTCACGATCATAGACCACCTAGATTACCTGGCGATCGTTATCGAAAACCCAAGAAAAAGAAGGACTTGGGATCAGGACAAAATGGTTGAAGCGATAAAAGCGCTGCGAGAAAAGAAGATGGGCCTGAAGCGAGCGGTGAAATTGTATTCTGTTCCGAAATCGACGTTAAGAAGATTTGTACACAGCGACTTGACTCCTGAAGAAGCCGTCGAAAAATGTTTGTCCAGAAAGATAacgacaaacaagaaaaaagttGAACCGGATTCAGACCCGGTATATTTAACACCAGAGCTTTGGGATGAGGACACTGACTCCGAGTAA
- Protein Sequence
- MTFIGAPTAPTAELASSCPRKTMRSSEETCFTIIDHLDYLAIVIENPRKRRTWDQDKMVEAIKALREKKMGLKRAVKLYSVPKSTLRRFVHSDLTPEEAVEKCLSRKITTNKKKVEPDSDPVYLTPELWDEDTDSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -