Basic Information

Gene Symbol
-
Assembly
GCA_963584085.1
Location
CAUZXH010000146.1:6430-7996[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0092 34 5.8 0.0 47 85 88 126 75 128 0.78
2 4 0.014 52 5.2 0.1 44 86 178 219 159 220 0.77
3 4 0.0059 22 6.4 0.1 50 83 275 307 258 309 0.86
4 4 0.00098 3.6 8.9 0.0 51 83 374 405 355 407 0.85

Sequence Information

Coding Sequence
atggaCTTAAATAATCCACAAAACCAAAGTTACTGGTTGGTGGTGCGTGAAGATCAAAAAAGCAGTGCTTATAACTTTGCTATACAACAACCTTCTGTAGGTGGCGACGAGACGAGATATATTGTTGATGCAGATCACGGACATTACAACGAAGTTACTGTCCAAAATACTGATCAAGATGTATCAAAATCACGAGGAGATAACTTTTGGGATCGCAACAAAATTAGATTATTACTCACACTTTGCCGTGATGATAAATTCAAGAATGCAAAGAGAGACAAATCACTGTGGGATGAAATAGCCAATCTGGTGGGGGTTAATGCTGAAGAGTGCagtaaaaagtacaaaaatctCCAAAGAACATATATTAGGCTAATGAGGAAGAAAAGACTTGGGAAGGATGTCAAATGGGTCCATTTCAACTTTTGTGAAGAAGTTTTCAAAGGATGTGATATCATGCCACCTGCAGTCCTTGAGCCCTGGGAAGACAGTAAAATTAGGCGCCTTCTAAACCTCTACATTGAGAACCTGAGTAATTTCAGAAATCATATACACAAGGACATTTGGAAAGCAATAGCATCAGAATTAGGTTCAACCGATTATGTCTGCTATcataagtttaaaaatatgaaaaaaacatatcaCAGCTTGTTGCAAAGAAGTCAAGAAAGTGAAATtggaaaatacataaaatggCCATACTATCAATACTTTGAAATAATATATCAAAACCACCATGCAGGACCATGGGACCGAGCCAAAATTGGTCAGTTGATTCAAGCTTATGGGCAAATAGCTTACAAGTTTAGAAACCCTAAGTATCAAAAAAAGGAACTTTGGAAGGAAATTTCTACAGTTGTTGGGGTCCCCCCTGAAAAGTGTGATAAAAAATTTAGGAATTTGAAACAGACATATGCCAGACTAAAAATGAAATCCCGCACTGGAAGATGCACAACAAGATGGAGGTACTACAAGGATTTTGATGCAATTTACAGCAAGACATATACTTCTAATGAAGAAGCAGAAGATAAAGTGGCATCCGAAAGATATGATTATGTAGATGAATTGTTAAAATTCTACTTAGAGAATAAGGAGAAGTTTTGTGATCCTTTCGGAAAAAAGAAGAATCTTTGGAAGATTATTGCCACAAAGGTGGGACTGTCTCCTCAAAAGTGCGACAAAAAGTTTCGCAATTTAAAACAGACATACTTTAGACTCAGAGAGAGAAAGTTGGCAAATGGTAGATGCAGCAGATGGCCTTATTATTCAATGTTTGAAAAGATTTATGGTGATAACAAAGCAGTCTGTCAAACAAGTCAAATGCCTGTTTCTGAATTCAAAAGGGTCTTGAGAGATGTGCAGGAGAAATCAGACAGAGGGAAATTTGAAAGACTTGTAGAAGTAGTAGAAGAATCTAATGTTATTCAGAGAGAAAGAAATAGAATTCTTCAAGCTTTATTGgatagaaaattaaatatgtaa
Protein Sequence
MDLNNPQNQSYWLVVREDQKSSAYNFAIQQPSVGGDETRYIVDADHGHYNEVTVQNTDQDVSKSRGDNFWDRNKIRLLLTLCRDDKFKNAKRDKSLWDEIANLVGVNAEECSKKYKNLQRTYIRLMRKKRLGKDVKWVHFNFCEEVFKGCDIMPPAVLEPWEDSKIRRLLNLYIENLSNFRNHIHKDIWKAIASELGSTDYVCYHKFKNMKKTYHSLLQRSQESEIGKYIKWPYYQYFEIIYQNHHAGPWDRAKIGQLIQAYGQIAYKFRNPKYQKKELWKEISTVVGVPPEKCDKKFRNLKQTYARLKMKSRTGRCTTRWRYYKDFDAIYSKTYTSNEEAEDKVASERYDYVDELLKFYLENKEKFCDPFGKKKNLWKIIATKVGLSPQKCDKKFRNLKQTYFRLRERKLANGRCSRWPYYSMFEKIYGDNKAVCQTSQMPVSEFKRVLRDVQEKSDRGKFERLVEVVEESNVIQRERNRILQALLDRKLNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-