Basic Information

Gene Symbol
-
Assembly
GCA_963584085.1
Location
OY757282.1:920294-927431[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.5e-10 2e-06 28.9 0.0 29 89 147 196 126 196 0.88

Sequence Information

Coding Sequence
ATGAGAGAAACGCAAAGGAATATAATCCGAATCACGTGTCTTCAGCAACCTTGCCACACTAatGACGAAGTGCTAGCCATAAACGACAAAGTCGTCGTCCGCGCCGAAGACTTACTAAGCTGGGTGTGCAACGGCGAGGGCTGGCGGTGGGGGCTGCGCGCCGTGTGGAGGGGTGCCTGCGCGCCCCCTGCCGAGCTGAAGCCCACTACGCCACTGCACCATACTAATATAGACTTTAGTGATGTGGAGAGCGAGAAGAATGCTATCGtGGACAACGACAGTCCGGGCGTGGTGGTCTTCTCGTACCCTCGGTACTGCCGCTACCGGGCGCTGGTGTCCCGGCTGGAGGGAGTGCAGGGGGACTGGCTAAGGGACTCGCTGGTGGCGGCGCTGGGAGGGTATGCCGCGCCCACTACGCATACCAGGATTCTTTACTGCAAGGTGGTGTCCCTCCGAGTGTTGTACGAGGCGGTGTCGTCCCGCGGCGGGTACGAAGCGGTCTGCAGACACAAGCTGTGGCGCGCTCTATGTGCCGACCAACCGGCGCGCGCGCGGCGACAGTACGAGAGATTCCTCCTGCCGTACGAGAATCACTCGCGGCGCAACGGGCTCGCTCAGCACAACGGCCGCCTGCCGCCGCGCACCGTCGCCACCATCGACGTCACCGGCTCCCCCCcgcccccggccccggccccgcCCCGCTCGCCTGCTCAACACGAGCCAGAACTGCCCAAGAGGTTGAGGACGCCGTCGCCGGAGCCTAAGCCTGTCATGCTGGTCAGTGTTAGATGTAAATAG
Protein Sequence
MRETQRNIIRITCLQQPCHTNDEVLAINDKVVVRAEDLLSWVCNGEGWRWGLRAVWRGACAPPAELKPTTPLHHTNIDFSDVESEKNAIVDNDSPGVVVFSYPRYCRYRALVSRLEGVQGDWLRDSLVAALGGYAAPTTHTRILYCKVVSLRVLYEAVSSRGGYEAVCRHKLWRALCADQPARARRQYERFLLPYENHSRRNGLAQHNGRLPPRTVATIDVTGSPPPPAPAPPRSPAQHEPELPKRLRTPSPEPKPVMLVSVRCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-