Pful029064.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- -
- Assembly
- GCA_963924575.1
- Location
- OZ004625.1:10044901-10052727[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.049 2.9 9.4 0.1 2 23 241 263 240 263 0.89 2 15 0.00031 0.018 16.3 0.1 1 23 322 345 322 345 0.96 3 15 0.42 24 6.5 0.1 1 23 383 405 383 405 0.97 4 15 1.5 87 4.8 0.8 2 23 440 463 439 463 0.94 5 15 0.0011 0.063 14.7 4.6 1 23 466 489 466 489 0.96 6 15 0.032 1.9 10.0 2.1 2 23 496 518 495 518 0.95 7 15 0.012 0.71 11.3 3.5 1 21 613 633 613 634 0.95 8 15 0.035 2.1 9.9 0.9 2 23 646 668 645 668 0.91 9 15 0.21 12 7.5 0.7 1 23 671 694 671 694 0.95 10 15 0.86 50 5.5 0.4 3 23 701 721 699 721 0.95 11 15 0.26 15 7.1 0.4 2 23 755 777 754 777 0.95 12 15 0.08 4.7 8.8 0.5 2 23 786 808 785 808 0.94 13 15 0.42 24 6.5 0.0 3 23 815 836 814 836 0.95 14 15 7.7 4.5e+02 2.5 4.9 3 23 958 979 957 979 0.95 15 15 0.42 25 6.5 0.9 1 23 1021 1043 1021 1043 0.96
Sequence Information
- Coding Sequence
- ATGGAGACGAAACTGTGCCGGATCTGCGGGAAGCTCGGGCAGAACTACATCAACATTTTTAGGGTGGAAGGCCTGAAAAACAAGATAGAAACCTGCCTCCCAATCATTATCTCCCGTCATTCGCTCCTGCCCGACACCATTTGCGGGGAGTGTTCAGAAAACGTGGACAATTTCTACGGTTTCATCAAAAACTGCCTTCAAAACATTATCATTTTGGAGGCTCAATACGACATCACCGAGTCTTGCCTGAAAACGAAACGGAAGCACGAAAAAAGCTGCTCGACCGATCTACAACCTCGGACCCAGGAGAAAAACGTACAAACCGAGGACTACCTCGATCTCCTCTTGAAAGAAAACGAAGAATTCATCTCGAATCTACCCCCGTTaccgagaactcaaaaactagtCGATTACGAAATCGAGTCCGATGCCAGCTCCGAGCCCGAAAACGAAAAACCCAAGCCCGACTTTAGTTTCGGCAGGAAATACTTCGACGATGCCGAGAACTATCTCATAAGCGAGATATCGCAACGGAAGAATCTCAAGAGGAAGCACGAGGATGTGGTCGAGTGCTGCAACCAACCGAAAATCTTCAAGATGGACCAATCGAACAACAGGAGGAAGAGCAAACAGCCGAAGAAGTTCGAATTGAAGGAGGAGGCGGCCGTGGAAAGTGACAGGCCGGTTTTGGTGGTGGACGATGTGGCGTTGTTGCTGCAGGTGTGTCTGTTGTGCGATGAGAAGTTTTCCGGTCCGTCGATGTTGGCTAGTCACGTGTTCGAAAGTCACGGCATTGACATGGCCCAGATTGTGGCCATGCAAAGCGAGAATTCGGACAAGAAGAAGAAGTTACCTAGTTTACTCAAAATTTCTGATCTCAGGAAAAGTGATACTTTAGATGACAATCAGCTATCAAGCGATCAGCAACCGGTCTGCGAGGACCCCCCAACCCTCGTTCCAAGTTTCGTTTGCTCTCTATGCCCCGCAGTATTTACCTCCCGTCCCGACCTCTTCGCCCACCTCCGTGCAAAACACGACGAGCAATCGTCTCTCACTTGCGGCATGTGCCTTTACCAAGCCTCCTCTCTAATCAATCTCCAGTCACACGTGGAGCTCTGCTCCCAACACCACCAAATACTCACCCGATACACGTGCCAAATCTGTCGCTACGGCGACGACAATTCCAAAGCCCTCGAGAACCACATCCTCGTCCACGACTTCCTATTGGACGCGTGCAAGAAACAATCGAGGATGTTCGATCCCGCCGACTACATCGAACCGAACGAAAACTACGACGGATCGTCGCCGAAGAGTCTGTCGTGCAGCGAGTGCGGCATGGAGGACTTCGAATCGTTCAAAGAGTTCAGCACGCATCGCAGGAGTCAACATTCGATCTTCCATTGTGATTTGTGCAATAAGTTCTACGGGCGCAACTCGCACCTGTGGAAACACGTGAACAGGTTGCACAAGGGCCATCCCAGCATCACGTGTCAGTTGTGCTACAAAACCAGTGCTTCGAAATACCACCTGGCGCAACATTTCAACAAGATTCACAGTGCTAAACCGTGCAAGCAGAAATCGGTGGATGTGTTACCGTCAGTTACGCGTTTGGAGGAGGATTTCATGTCGCAGAAGTTCCAAGCGTTCGATTTTCAATCGGTGAAGCAGAGTTTCATGCGACAGGAGTTGCTTCAGAAAAACGTCAACACGCAGTCTCAAAGCGACGATTCGTCTGAGTCGAAAGGGCCGTCTTGCGCGCCTAAAGAAATTGATTCGACTAGTGACCTCTACACGAACATCATCACAAACTACACCCCTCCGGCGAACGAGGGAGAATTCAAGTGTCCCAAGTGTGCCAAAGGGTTTCACAAAAAGACGCTACTCAAGAAGCACAAGAAGAACTGCAGACCACGCCTCCAGAAAGACCTGCTCACACGATGCAAATCCTGCGCGCGCATCTTCAAAGACCGCCAGAGCCTCGCCAAGCACCTCGTCAACTACCATTCGGAGTACGCGTGCGAGATCTGCGGACAGAAGGTGCAAAGCAAATGCGAGATCGTCTCCCACATTCGTTTCTCCCACCCCGGCTGTCATTTGTTCTGCACTCTGTGCGGTAACATTCTGCGCAGTCGCAACGACCTGTCCGAGCACAACCGCGACCACGTCAACTCCTACGTCTGTCAATTCTGCGCCGATCCACTGCCTTCCAAGATCAAGCTCAAGATGCACATTTTGAGCCTCCACCGGAAGATACTCAGCCTCAGTTGTGGGGTTTGTCTGAAGCTGTTTGAAAGTCAACACGTGCTGAGGGATCACGTGCGTTTGGTGCATCGCGATCAGTTAGCACCACTGACGTCGTGTCCCGTTTGCGGCAAGAACTACGGGTCCAAGTGGAAGACGTACGACCATCTCAACAAGTCGCACGGAAGGATTTTCAAAGCGTGCAAAGCTTGCCTGGAAGTGTTCGACAATGACGCACAACTGCAAGTACATTACGAAACGGCGCACGCCAATTCTATAGTGAAAACCGCACCGGTTGCAGTGCTACCACCAGTGAATGTTGTTAATAACTGTGAGAGTGAATCTGAACAAACAAACGACAGTGAACAAAGTGACGatgaagaagaacaaaagaacGAATACTCGACTCTACTCGACATGAGGGATAACAAAATCTCGCTGTTGGAAAAACGTCTTTTGGGTAAGAAACTCACCGACGACGACATACCAAGAACACTAACGCCAAAtatacaaataaaaaaaaaagttgatctCAAAAAGGAAGAGTTGGACGACGGTGTTAGCCACTCGCCTGGCCAACACAACAGTTCGAAAAGAACAGTTTACGTGAACAGTAACGACCCGTCTTTTTGTGAAATCTGCCATAAGACTTGGCCAGCCAAGAAACACTTGTGGCAGCACTACATTCGTTGTCACAAAAGTGTAGCGGCGACAGTTTGCGGCATTTGTTTAAAAACGAACGACTCTTACAGTATTTTACAAAATCACTTGCGCGAAACACATCCGACTCTTTTACACGGGCAGGGTTTCGGGTCGAACTTTATTTGCCGCATCTGTGGCCGTTACCACAACGCCAGTTCTAAACTAAAGCTACACATGGCTATTCACGAAAACTTCGATTGGTCGTTACTGGAAGAGCCTCCGAAAGTTGAAATACAGAAGGAAGAGAACGGATTTGGGGAAGAAATCAACTACGACAGCTTGATTGAACAAGTTGAATGTTCTTCGACGTCGGAGTCTGACGCTCAAGATGTTAAGGAAGACAAAGAGTCTAGCTCTGAAGAAGACGAAGATGGTGTAGAAGAGGATGAGAGTGAAAGCGACGTCTCTGAGAATTCTCTTGAATCGCAAATGCTGCAAAACATGTTAAGAGAGAAAGAAGGTACGCAAAGTAACGGAAGAGAGTATGCTAGTTCTATTAGTGAGGAGGATTCTAGAAGCACGTTTTCGGTTAAAAGTGAAAGTAGTAGTGAAGACGTGGATGAAGAAAGCATAAGATTCAAAACCGAAGAATTAGATTCGGCTATTCAGTCAATCAAGTACGAGTGCGTTGAAACTGTAGAGCATCCGTTAGACGTGGACTACTGCGACTTGCAGTCGCACAGCTTGAACGACAATGAAATCGAGTCGGCCGTTGGTAGTATACTCTAG
- Protein Sequence
- METKLCRICGKLGQNYINIFRVEGLKNKIETCLPIIISRHSLLPDTICGECSENVDNFYGFIKNCLQNIIILEAQYDITESCLKTKRKHEKSCSTDLQPRTQEKNVQTEDYLDLLLKENEEFISNLPPLPRTQKLVDYEIESDASSEPENEKPKPDFSFGRKYFDDAENYLISEISQRKNLKRKHEDVVECCNQPKIFKMDQSNNRRKSKQPKKFELKEEAAVESDRPVLVVDDVALLLQVCLLCDEKFSGPSMLASHVFESHGIDMAQIVAMQSENSDKKKKLPSLLKISDLRKSDTLDDNQLSSDQQPVCEDPPTLVPSFVCSLCPAVFTSRPDLFAHLRAKHDEQSSLTCGMCLYQASSLINLQSHVELCSQHHQILTRYTCQICRYGDDNSKALENHILVHDFLLDACKKQSRMFDPADYIEPNENYDGSSPKSLSCSECGMEDFESFKEFSTHRRSQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLAQHFNKIHSAKPCKQKSVDVLPSVTRLEEDFMSQKFQAFDFQSVKQSFMRQELLQKNVNTQSQSDDSSESKGPSCAPKEIDSTSDLYTNIITNYTPPANEGEFKCPKCAKGFHKKTLLKKHKKNCRPRLQKDLLTRCKSCARIFKDRQSLAKHLVNYHSEYACEICGQKVQSKCEIVSHIRFSHPGCHLFCTLCGNILRSRNDLSEHNRDHVNSYVCQFCADPLPSKIKLKMHILSLHRKILSLSCGVCLKLFESQHVLRDHVRLVHRDQLAPLTSCPVCGKNYGSKWKTYDHLNKSHGRIFKACKACLEVFDNDAQLQVHYETAHANSIVKTAPVAVLPPVNVVNNCESESEQTNDSEQSDDEEEQKNEYSTLLDMRDNKISLLEKRLLGKKLTDDDIPRTLTPNIQIKKKVDLKKEELDDGVSHSPGQHNSSKRTVYVNSNDPSFCEICHKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNDSYSILQNHLRETHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWSLLEEPPKVEIQKEENGFGEEINYDSLIEQVECSSTSESDAQDVKEDKESSSEEDEDGVEEDESESDVSENSLESQMLQNMLREKEGTQSNGREYASSISEEDSRSTFSVKSESSSEDVDEESIRFKTEELDSAIQSIKYECVETVEHPLDVDYCDLQSHSLNDNEIESAVGSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -