Pful013149.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- -
- Assembly
- GCA_963924575.1
- Location
- OZ004619.1:16061575-16068187[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 3.5 2e+02 3.6 0.0 9 21 1346 1358 1345 1359 0.91 2 9 0.00075 0.044 15.1 3.4 1 21 1364 1384 1364 1387 0.89 3 9 0.49 29 6.3 4.0 1 19 1391 1409 1391 1411 0.95 4 9 1.3e-05 0.00076 20.7 1.1 1 23 1422 1444 1422 1444 0.99 5 9 0.91 53 5.4 1.0 3 23 1459 1479 1457 1479 0.96 6 9 5.6e-05 0.0033 18.7 3.0 1 23 1484 1506 1484 1506 0.97 7 9 0.084 4.9 8.7 1.1 1 23 1512 1534 1512 1534 0.98 8 9 0.00024 0.014 16.7 1.7 1 23 1540 1563 1540 1563 0.96 9 9 0.00047 0.028 15.8 4.0 1 23 1576 1599 1576 1599 0.95
Sequence Information
- Coding Sequence
- ATGGTTTCAATACTGGATTTTGCTGATTGGATGGATCAGATTGCAGAAGCGTTAACATTAATTGACACTACAACGCGAGAtaagaagaaaaaatattttgttgcgGCAACGGTAGATAATACGTCCAAGAATAAATCCTGTGCTTGCTGCAAGGAAAAAGAGAATCATGGTCTAGGGGAATGCAAGAAGTTTCTCAGTTTCGACGTCGAAAATCGATGgaattttttaagaaaatcaaaaaagaaaatttgttattcGTGCCTTGGTTTTCTGCACACAAGTCCACAGTGCAAGAAAAAGGTGAAGTGCAATGTAGAAAATTGTATTAAGAATCATAATTCTTTACTACATAATCCTTCGAAAAAAGAAGTTGTCGAAAACGTCGAGGAAAATGTTGTTATAGGTCATCATAGGAACAAGGAAAAAACAAAAGTTCTTCTGAAAGTTGCCCCGGTAACGTTAAGGGGCACGAATGGTGAAGTGGAAACATACGCATTCTTCGACGAAGGCTCAACAATAACATTAATCGATGAAAGAGCGGGAGAAGAAACCGAATATAAACTCACGGACGTGAAGACTGTGAAGAACCTGAATTTGCCATCACAGACGGTAAACGTAAAGGCTTTGGCTGCTAAGTGGGAGTACCTGTGCcaagaaaatataaatattttaaatCTTAGCAACGCTCATCCACGAATTCTCCTTGGTCAAGACAACGTTGATCTAATTGTTTCCAGAGAAGTTGTAACAGATTCTCGACTGAAAAATGGTCCGATTGCTTCTAAAACAAAATTGGGATGGGTTTTACATGGAAATATTGGACTTAATCGTCACAGATCTGATGTGGTATTCATTAATTACATTTCAAATCGTCAGTCCGAAAATGATTATGGTGGAATTGAGAAAATAGTCGAAGAATcttataaaattgaaaatttcggAGTGATAGTAAATAAAACATCTTTAAAATCCCCAGAAGAAATGCGTGCCGAAAGACTTTTGGAAGGAACTACAGACCGAAGCGGCGAAAGATGGCAAACGGGATTATTATGGAAACAGGACGAACTACAGTTGCCGAATAATAAAGAAGATGCGTTACATCGTTTGAAAGGAATTGAGAAGAAATTGTCACATAATCCTCAACTTCACACTGATTATTCTAACAAAATCAAAGAATATTTGGAGAAAGGCTATGCAAGAAAATGTAGCAAAGAAGAATTGGCCCAATATCAAAGTGGTGATCGAATTTGGTACTTACCACATTTTCCAGTATTCAACCCGAACAAGCCAGGCAAAATGCGATTCGTTTTTGACGCTGCTGCTAAATCACAGTCCTCCTCTGAAAGGATGAGTCTCAACGATGCCCTAACGATGCCCTATCCAGACCTTCTAAATTCATTAATGTCGATTTTGTTGAAGTTTCGTCAAAGAAATATTGCCTTTATTGGGGATATTCGAGAAATGTTTCACCAGGTCAAGATAATTCCTAAGGACAGAAGAGCTTTGAGATTTTTATGGAGAGAAAATCCTCGAGTGGAACCAGAAGTGTACGAGATGCAGGTCATGATCTTTGGTAGCATCTGTCCTCCGGCTTCTGCTCAATATGTTTTAAGAAGAAATGCTTTGGAATTTGAAAAGCAGTTTCCAGAACCTGTCAAAGCTATCGTCGAGAAAACTTACATGGACGACTACATAGATAGCAGAGACACCGTTGAAGAATCCATCCAAATTATCAACAACGTGATTGAAATACACGCGGCTGGTGGCTTCACTATGACAAATTGGGTCTGCAATTCCAAAGACGTCATCAAAGAAATCCCGTTGGAATTAAGAACTTCAGATTTGAAAAACATGAACCTTGACCTTGAAGATATTTCAACAATTCAAAGAACGCTGGGTCTGAAATGGAATGCCGGTGaagataattttttctttaccttGAAGTTAAaacaagaaattgaagatattttAAAGGAACAcaaattttgtacaaaaagAGACGTTTTAAGAATTCTAATGACCATTTTCGATCCTTTGGGCTTCTTATTGAATTGTACCACTTCGGCTAAAATATTATTGCAAGATATTTGGCGTCAGAAACTTGGTTGGGACGAAGAATTACAGGGTGACTTAAAAGTGAAATGGAGCAGATGGTTGAGTTGGCTTCTTCAAATCTCAAACATCACAATTCCCAGATGCTATGTTCGAGACGTTCATTTAGCAGACAAGATTCAACTTCATATGCTGTGTGATGCCAGCGAAAAAGCATTTGCATGTGTTGTCTATTTGCGAGTCTCCATGAAGGAACAGCCCCTGAAGCCGGTTTCCATTCCAAGACTGGAGCTGCAAGCTGCCCTGCTGGGAAGTAGACTTCTCAAATATGTCACGTCGCCGTCGGAGTTGGAATTGAAGATTGACGCTGTCTTTTGTTGGTCAGACTCCACGACTGTGCTGTCTTGGATTAACCCAGAAGATTGTAGAAAATTTAAGCCGTTTGTAGCTCATCGCTTAAGTGAAATAAAAGAGAACACGGAACCAAAATGGTGGCGGTGGGTTCCAACTGCTGAAAACACGGCCGACGATGCCACAAGACAAGAAACGGAAATCTCTTTAGCTAAGAAAGGCGTCAATAATTCTAATAGATCAACAGCTTGGATTATTCACTTGAGGAATAAGATTAAAGGTGCAATGGAAACACCTTTCCATGAGGTTACGTccaaagaaattgaaaaagctGAAATTCTATGGTTGAGATGGACACAAGAAAAAAGTTTTCATGAAGATCTTGAAATTCTGAGAAAGGGAAAGGATAAACGATtaggaaaattatttaaattatctCCAAAAATTGATAAAGATGGAATTTTACGATGTCACGGCAGAATTCAGTTAGCTCCAGCTTATGTAAGCGAAGACACGAAGAATTCGATTATTTTGGAAGGAGATGACAAGTATTCTAGTCTACTGATTCAACACATTCATCGACGAACTGGTCACTTGGGAGTGGAATATACTATAAATTGCATTCGCGAGAAATTCTGGATTATTAAAATTAGGAGCGCAGTAAAAAGAGTTCTGAACAACTGCCAGTACTGTAAGGTCAAGAAGGCGAAGCCAACAGTGCCATGTATGGGGCTGTTACCAGAAGCCAGATTAGGAGCCTTTTGCAGACCATTCTCCTATGTCGGGATTGATTTCTTCGGTCCTTTAAACGTGACCGTAAAAAGATCAACGGAAAAGAGGTATGGAGTTCTCTTCACTTGCCTGACTGTTAGAGCAGTTCATGTAGAAATCGCTTCATCTTTGGATACCAACTCTTGCATAATGGCAATACGAAGATTTGCTGCAAGAAGGGGAAATCCTCGGAAAATTTATTCTGACAACGGGTCAAATTTGAAAGCAGCTGAAAAGGAGTTGCGAGAAGCCATCCAGAACTTTAATCAGAAACAGATGTTACAGGCATTGTCAACAAGAAATATTGAGTGGGCATTTATCCCTCCTGGAAGCCCACACATGGGAGGTGCCTGGGAACGTTTGATAAGATCAGTTAAAACGTCATTGTACACAGTGTTGAAAGAAAGAAAACCACGGGAAGAAGTCTTGAATACCCTTTTAGTAGAGTCTGAAAACATTGTAAATAATCGACCCCTGACTCACATTTCTCTAGATCCCAGCGATGAATCTTGCTTGACACCTAACCACTTTTTAATCGGTTCAGGAGACGTTTTAACTTTAGTTGGAGAGTTCAAGTGGGAAGACGTCAATTTAAGAAAATCTTGGCAAATATCTCAAGCTTTGATCGAGTCATTTTGGAAACGATGGGTGAAAGagtacctacatactttagtaCCCAGAACCAAATGGTTCGAAGATCTCAGTAACGGACTGAAAATTGGTGATGTTGTCATTATTTGTGATGAAAACTCTCCCAGAAACGTATGGCCCATGGGGAGAATTACTGACGTTTTCAAAGGTCGAGATGATAGAATTCGAACAGTGGAAGTTAAGACGAAGTCAGGAGTTTTCAAGAGGCCGGTGTTCTGTCGACAGGAAAATCTCAAATCGCATCTTTGCAATACTGACGTTCGTCATCGATGTAATCTCTGTGATAAATTCTTCACTCAAAAGAAATACTTGTCTCGCCACTTTGCGGCTGTGCACGCCAAAAAGTTTGAGTGCAGCAACTGCCAGAAGACATACCACTCAAACAAGGACTTACTCGAACATAATTGTTGCAATATTCCAATTGCGGACAAACAAGTTTTCAAATGTCCCATTTGCGACAAAGAGTTTTTCGCAAAACGTTATTTGCAGAAACACATAAAGGTTCACAAATCCCGAGCAAAATTATCGACTAATACCGGATCAGTAATTTGTGAAATTTGCGGGTTGTATTTGGAAACTCGAAACTCTTATCACATACATAAGAAGAAGCACCAGGAACCCGCCTTCTCCTGCCAAGTGTGCGATAAGAAATTCTGCAGGCGAGACGGTCTCAAGGCGCATACCTTATCTCACGGGGGAGATTCAGAGTTTGAATGTACAATTTGCAACAAGAAAATGAAAACTTCGAAAATTTTGGCGTTGCACATGAAAAATCATAGCAGTCAAGACTATTTTAAGTGTAGCACTTGCGGGGCATGTTTCAAGCAACCCTGGAGCTTGAGTAATCACGTTCAGAATAGTCACGAAGGCAAAAAGATCACTTGTCCGCTTCCAGAGTACTACAGGTGTCCAATTTGCGAGAAACCTTTCAAATTAAAGAGTTCGTTGTTTAGACATTGCAGAAAATCACATTCGCAAGATGTTAAAAAAACTGATCTCACCAATATTCAGCCGAAATTGTTGTGTCTGCAGAAGAGTGTTAACAAAAAGAAAATCGCCAAGCCGAAGAATGTAGCCAAAGAAAATCAGCAGATGGCAAATAGTCGCTCTGATGATTTAGATAATGACTTGTTTGCTCATATAGACAAGTTTTTAAACAGTTCTGCCATTGCAGAAGATAAATCGCAAAGTCGCAAAGAAGCTGTTGACGATGTCGTAAAGGAACTAGAAGCGGATTCTTCGAAACCAAGAAAACAGGCCGATGAGGTTTGCCTCTCCATACCGGATCTTCTGGAAGATGACCAAGAAATCATTCTAGACAAAGATGCCTACATTTTGGATAATGGTACTATCGTACAACCTCAGGCAGATTTAGGTAGCGTGGTGATTTATATGCTGGATCAACCCTAtcaacaataa
- Protein Sequence
- MVSILDFADWMDQIAEALTLIDTTTRDKKKKYFVAATVDNTSKNKSCACCKEKENHGLGECKKFLSFDVENRWNFLRKSKKKICYSCLGFLHTSPQCKKKVKCNVENCIKNHNSLLHNPSKKEVVENVEENVVIGHHRNKEKTKVLLKVAPVTLRGTNGEVETYAFFDEGSTITLIDERAGEETEYKLTDVKTVKNLNLPSQTVNVKALAAKWEYLCQENINILNLSNAHPRILLGQDNVDLIVSREVVTDSRLKNGPIASKTKLGWVLHGNIGLNRHRSDVVFINYISNRQSENDYGGIEKIVEESYKIENFGVIVNKTSLKSPEEMRAERLLEGTTDRSGERWQTGLLWKQDELQLPNNKEDALHRLKGIEKKLSHNPQLHTDYSNKIKEYLEKGYARKCSKEELAQYQSGDRIWYLPHFPVFNPNKPGKMRFVFDAAAKSQSSSERMSLNDALTMPYPDLLNSLMSILLKFRQRNIAFIGDIREMFHQVKIIPKDRRALRFLWRENPRVEPEVYEMQVMIFGSICPPASAQYVLRRNALEFEKQFPEPVKAIVEKTYMDDYIDSRDTVEESIQIINNVIEIHAAGGFTMTNWVCNSKDVIKEIPLELRTSDLKNMNLDLEDISTIQRTLGLKWNAGEDNFFFTLKLKQEIEDILKEHKFCTKRDVLRILMTIFDPLGFLLNCTTSAKILLQDIWRQKLGWDEELQGDLKVKWSRWLSWLLQISNITIPRCYVRDVHLADKIQLHMLCDASEKAFACVVYLRVSMKEQPLKPVSIPRLELQAALLGSRLLKYVTSPSELELKIDAVFCWSDSTTVLSWINPEDCRKFKPFVAHRLSEIKENTEPKWWRWVPTAENTADDATRQETEISLAKKGVNNSNRSTAWIIHLRNKIKGAMETPFHEVTSKEIEKAEILWLRWTQEKSFHEDLEILRKGKDKRLGKLFKLSPKIDKDGILRCHGRIQLAPAYVSEDTKNSIILEGDDKYSSLLIQHIHRRTGHLGVEYTINCIREKFWIIKIRSAVKRVLNNCQYCKVKKAKPTVPCMGLLPEARLGAFCRPFSYVGIDFFGPLNVTVKRSTEKRYGVLFTCLTVRAVHVEIASSLDTNSCIMAIRRFAARRGNPRKIYSDNGSNLKAAEKELREAIQNFNQKQMLQALSTRNIEWAFIPPGSPHMGGAWERLIRSVKTSLYTVLKERKPREEVLNTLLVESENIVNNRPLTHISLDPSDESCLTPNHFLIGSGDVLTLVGEFKWEDVNLRKSWQISQALIESFWKRWVKEYLHTLVPRTKWFEDLSNGLKIGDVVIICDENSPRNVWPMGRITDVFKGRDDRIRTVEVKTKSGVFKRPVFCRQENLKSHLCNTDVRHRCNLCDKFFTQKKYLSRHFAAVHAKKFECSNCQKTYHSNKDLLEHNCCNIPIADKQVFKCPICDKEFFAKRYLQKHIKVHKSRAKLSTNTGSVICEICGLYLETRNSYHIHKKKHQEPAFSCQVCDKKFCRRDGLKAHTLSHGGDSEFECTICNKKMKTSKILALHMKNHSSQDYFKCSTCGACFKQPWSLSNHVQNSHEGKKITCPLPEYYRCPICEKPFKLKSSLFRHCRKSHSQDVKKTDLTNIQPKLLCLQKSVNKKKIAKPKNVAKENQQMANSRSDDLDNDLFAHIDKFLNSSAIAEDKSQSRKEAVDDVVKELEADSSKPRKQADEVCLSIPDLLEDDQEIILDKDAYILDNGTIVQPQADLGSVVIYMLDQPYQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -