Basic Information

Insect: Pycnomerus fuliginosus
Gene Symbol: -
Assembly: GCA_963924575.1
Location: OZ004624.1:8183782-8192037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.048 2.8 9.4 2.9 2 19 91 108 90 113 0.90

2 25 0.35 21 6.7 0.5 1 23 122 145 122 145 0.90

3 25 0.034 2 9.9 1.5 1 23 183 206 183 206 0.95

4 25 0.091 5.3 8.6 3.8 3 23 211 232 209 232 0.96

5 25 0.07 4.1 8.9 4.2 1 23 241 264 241 264 0.92

6 25 0.052 3 9.3 1.6 2 23 274 296 273 296 0.95

7 25 0.0047 0.27 12.6 0.9 1 19 304 322 304 324 0.96

8 25 0.38 22 6.6 5.0 1 23 336 359 336 359 0.94

9 25 0.04 2.4 9.7 5.4 2 23 369 391 368 391 0.96

10 25 0.0079 0.46 11.9 0.5 1 23 398 421 398 421 0.94

11 25 2.8 1.6e+02 3.9 1.7 2 23 431 453 430 453 0.90

12 25 0.029 1.7 10.1 4.1 2 20 463 481 462 485 0.94

13 25 0.044 2.6 9.6 1.1 1 23 494 517 494 517 0.93

14 25 0.0055 0.32 12.4 8.0 1 23 525 548 525 548 0.98

15 25 0.36 21 6.7 1.2 3 17 559 573 558 574 0.94

16 25 0.00024 0.014 16.7 4.3 1 23 644 667 644 667 0.96

17 25 0.0012 0.068 14.5 3.3 2 23 677 699 676 699 0.96

18 25 0.0088 0.52 11.8 4.6 1 23 708 731 708 731 0.95

19 25 0.51 30 6.2 3.4 2 23 741 763 740 763 0.95

20 25 0.039 2.3 9.8 6.7 2 23 773 795 772 795 0.95

21 25 0.028 1.6 10.2 3.5 2 23 805 827 804 827 0.93

22 25 0.69 40 5.8 1.1 1 20 834 853 834 854 0.95

23 25 0.4 23 6.6 4.7 1 23 866 889 866 889 0.95

24 25 0.72 42 5.7 4.3 2 23 899 921 898 921 0.92

25 25 0.25 15 7.2 6.0 2 23 934 956 933 956 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.048	2.8	9.4	2.9	2	19	91	108	90	113	0.90
2	25	0.35	21	6.7	0.5	1	23	122	145	122	145	0.90
3	25	0.034	2	9.9	1.5	1	23	183	206	183	206	0.95
4	25	0.091	5.3	8.6	3.8	3	23	211	232	209	232	0.96
5	25	0.07	4.1	8.9	4.2	1	23	241	264	241	264	0.92
6	25	0.052	3	9.3	1.6	2	23	274	296	273	296	0.95
7	25	0.0047	0.27	12.6	0.9	1	19	304	322	304	324	0.96
8	25	0.38	22	6.6	5.0	1	23	336	359	336	359	0.94
9	25	0.04	2.4	9.7	5.4	2	23	369	391	368	391	0.96
10	25	0.0079	0.46	11.9	0.5	1	23	398	421	398	421	0.94
11	25	2.8	1.6e+02	3.9	1.7	2	23	431	453	430	453	0.90
12	25	0.029	1.7	10.1	4.1	2	20	463	481	462	485	0.94
13	25	0.044	2.6	9.6	1.1	1	23	494	517	494	517	0.93
14	25	0.0055	0.32	12.4	8.0	1	23	525	548	525	548	0.98
15	25	0.36	21	6.7	1.2	3	17	559	573	558	574	0.94
16	25	0.00024	0.014	16.7	4.3	1	23	644	667	644	667	0.96
17	25	0.0012	0.068	14.5	3.3	2	23	677	699	676	699	0.96
18	25	0.0088	0.52	11.8	4.6	1	23	708	731	708	731	0.95
19	25	0.51	30	6.2	3.4	2	23	741	763	740	763	0.95
20	25	0.039	2.3	9.8	6.7	2	23	773	795	772	795	0.95
21	25	0.028	1.6	10.2	3.5	2	23	805	827	804	827	0.93
22	25	0.69	40	5.8	1.1	1	20	834	853	834	854	0.95
23	25	0.4	23	6.6	4.7	1	23	866	889	866	889	0.95
24	25	0.72	42	5.7	4.3	2	23	899	921	898	921	0.92
25	25	0.25	15	7.2	6.0	2	23	934	956	933	956	0.95

Sequence Information

Coding Sequence: ATGTCCACTTCCACATTCGACATAGATCCCCTGGACACTGAAATCAAGCAAGAAGTCGACATAAAACAAGAATACATCAAATGTGAATATTGCGGTTTTCAAATCGACCAAAGTGAAATCGAATTACATCAATGCATCACACCAGACATCATCACAATTGACGAAATGGCCAAATTCGAAGAAACAGAGAGGTTTGATTGTCGAGAAGAAGATCCCTTAAGTCAGCACATACTTTCCGAAAAACAAAAGCGAAACCAAACCAAATGGATCCAGTGCGGAAAATGCGGGTTCAAATGCAAAACAAGGAAAGAACTGCAAAACCACAATGTCGAGAAACACCTAAATTCGAAGGAAACTAATTGGTTTCAATGCGAGAAGTGCGACTTTAAGTCTGGAATGAAGGAAGGCTTAAAATCGCACGTGGCTGACAAACATCCGAGTGTTAAGTGGTTTCACTGTGAGGAATGTAACTTCAAAACCACATTACTTTCAGGTATGAAACGACACAAAAATTGCAAACACCTTAATCCGAATGAAGGAGAATGGTTTGATTGTGACAATTGCGAGTATAAAACCAGATACAAAGGGAGTCTGAAAATACACGTGACTCGTAAACACCCTGACATCGACTGCGACAAATGCGAGTTCAAGTGCAAGGGCAGGCGAGAATTAAAAAACCATTTAAAAACAAAGCACGAAAGTCCAAAAGAAACAAATTGGTTTAAATGTGAAAAATGCGAGTACAAAACCAAAACAACCGGCAAACTGAAAAGACACGCGATTCACAAGCATCAAAACCCCGAGGAGATAAAGTGGATCAAGTGCGAAAAGTGTGATTTCAAATCCAAGACTGAGGGATATTTGAGAATCCACACGACTCGCAAGCACTTGAGTCAGGAcgtaaagtggtttcagtgcgaaaaatgcgactttaagACCAGGCATCCGGTGAATCTTAAAACGCACGAAATTTGCAAGCACCTCAACCCGAACGAAACcgagtggtttaagtgcgagaactGCGAATATAAAACGAGAGTGAGGTGCAATTTAAAGACCCACGTCACTTACAAGCACACTAGTTTAGATCAAATAAAGTGGATTAAGTGCGAGCAATGCGACTTCCAGTGCAAGACGAGGGGGCATTTAAAACTGCACGTGAATCGAAAACACTCGGATgaagtaaaatttttttattgcgaGATCTGCGACTACAAAAGCAAAGCTTTGGACTCGCTGAAAAGGCACAGGATTAACATACACATGACTCTGGATCAAATCGAGTGCCTTCAGTGCGACAAGTGCGGCCTCTTGTGTAAAACAAAGGAAATACTGAAATTGCACACGGTTCGCAACCACTTAACCGACGACGAAATCAAGTGGCTGCGGTGCGACATATGCGACTTTAAAACAAAACAACACGGCAATTTAAAGACGCACATGATTTGCAAACATCGCGATGCCAGTGAAATAAAATGGTTCCAGTGTGACCAATGCGAGTATAAGAGCAAGATTAAAGGGAATTTAAAAAGTCACGTGGCTTACAAACATCCGAGTGATGAAATAGAGTGGTTTAGGTGCACCCAATGTGAGTTTAGGTGCAAGACGAATGCACATTTGAAAACGCACATGAATCGTAAACACTTGGCCCCGGAGGAGATAAAGTGGATTTTATGCGACATGTGCGGGTACAAGTGCAGGACAAATGGGCATCTGAAGCAAGGCAAACATACCATGTCCACTTCTACGTTCGCCTTTGATTCTTCTGATGAAATAAAGGAAGAAGTAGACATTAAGCAAGAACATATCAAATGTGAATTCTGTAGCCTTCAAATCGACCCAAATAATACCGATGGACACATATGTGTTACGCTTAATCGCGTAACCGAAGAAGAAGAAACAGAAGAACACCAAGAAAAAACAAAATGGTTCCACTGCGAAATATGCGACCACAAGTCTAAACGCAAAGACAATTTGAAGGCTCACATGATCTCCAAACACGAATACCCTAAAATAATCAAATGGATCTCttgcgagagatgcgactacaggTGCAAATTGAAATCGAATTTGTTAAAGCACATGAACCGTTTACATCAAGACGTAAAAGACATTAAAAAGTTCAAATGCGACAAATGCAGCtatatttgcaagaaaaaggAGAATTTAAAACAACACGCGATTCGTAAACACTTACCTCCAGATGAAATAGAGTGGGTACAGTGCAAAAAATGCGAGTTTAGGTGCAGAATAAAAGGAGATTTAAAACTTCACACGATTCGGAAACACCCTATTTCGGAAGATATAGAATGGCAGCGTTGCGAGAAATGCGAGTATAAATGCAGGAGGAAGGATCATTTACAGCTACATACAATCCGTAAACATATGTCTGCAGATGAAATAAAGTGGCTTCGGTGCGAAAAGTGCGACTTTAAGTGCAAGACAAAGGGAAGCTTGAAAGAGCACGGAATTCGCAAACACTTAAATCAAGTGAAATGGTTCCACTGCGAGAAATGCGAGTTTAAGACCAAAAACGATTGGCAATTAAAAGCGCACACTATTTGCAAACACCTTAATCCGAGTGAAATCGAGTGGTTCCAGTGCGACAAATGCGAATTTAAGTGTAAACTTAAGAGCTATTTAAAAGGTCATGTGACTAGTAGACATCCAAATGTTGATGACATAGGGGGGGTTTATTGCAGGAAGTGCCGATTTAAGTGCAAAACAAGGGAGGATTTGAAAGTGCACACGATTTATAAACACCTCGCTTTGGACGAGCTGGACGAGACAGCGTGGCtccagtgcgagaaatgcgaattTAGGTGCAAGACGAAGGGACATATGAAAGTGCACACGATTCGTAAACATTTAAATCctgaaaaaaataaagttttagtGTGA
Protein Sequence: MSTSTFDIDPLDTEIKQEVDIKQEYIKCEYCGFQIDQSEIELHQCITPDIITIDEMAKFEETERFDCREEDPLSQHILSEKQKRNQTKWIQCGKCGFKCKTRKELQNHNVEKHLNSKETNWFQCEKCDFKSGMKEGLKSHVADKHPSVKWFHCEECNFKTTLLSGMKRHKNCKHLNPNEGEWFDCDNCEYKTRYKGSLKIHVTRKHPDIDCDKCEFKCKGRRELKNHLKTKHESPKETNWFKCEKCEYKTKTTGKLKRHAIHKHQNPEEIKWIKCEKCDFKSKTEGYLRIHTTRKHLSQDVKWFQCEKCDFKTRHPVNLKTHEICKHLNPNETEWFKCENCEYKTRVRCNLKTHVTYKHTSLDQIKWIKCEQCDFQCKTRGHLKLHVNRKHSDEVKFFYCEICDYKSKALDSLKRHRINIHMTLDQIECLQCDKCGLLCKTKEILKLHTVRNHLTDDEIKWLRCDICDFKTKQHGNLKTHMICKHRDASEIKWFQCDQCEYKSKIKGNLKSHVAYKHPSDEIEWFRCTQCEFRCKTNAHLKTHMNRKHLAPEEIKWILCDMCGYKCRTNGHLKQGKHTMSTSTFAFDSSDEIKEEVDIKQEHIKCEFCSLQIDPNNTDGHICVTLNRVTEEEETEEHQEKTKWFHCEICDHKSKRKDNLKAHMISKHEYPKIIKWISCERCDYRCKLKSNLLKHMNRLHQDVKDIKKFKCDKCSYICKKKENLKQHAIRKHLPPDEIEWVQCKKCEFRCRIKGDLKLHTIRKHPISEDIEWQRCEKCEYKCRRKDHLQLHTIRKHMSADEIKWLRCEKCDFKCKTKGSLKEHGIRKHLNQVKWFHCEKCEFKTKNDWQLKAHTICKHLNPSEIEWFQCDKCEFKCKLKSYLKGHVTSRHPNVDDIGGVYCRKCRFKCKTREDLKVHTIYKHLALDELDETAWLQCEKCEFRCKTKGHMKVHTIRKHLNPEKNKVLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -