Basic Information

Insect: Pycnomerus fuliginosus
Gene Symbol: -
Assembly: GCA_963924575.1
Location: OZ004625.1:12249141-12260164[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.3 1.4e+02 4.1 0.6 2 14 60 72 59 73 0.88

2 14 0.004 0.24 12.8 1.1 2 23 629 650 628 650 0.97

3 14 7.6e-06 0.00044 21.4 4.7 1 23 655 677 655 677 0.97

4 14 0.00042 0.025 15.9 8.3 3 23 685 705 683 705 0.96

5 14 0.00049 0.029 15.7 0.6 1 23 710 733 710 733 0.92

6 14 1.5 89 4.7 0.5 2 20 742 760 742 764 0.89

7 14 0.16 9.5 7.8 1.5 2 23 779 800 778 800 0.96

8 14 2.6 1.5e+02 4.0 0.3 3 23 810 831 808 831 0.84

9 14 0.98 58 5.3 0.1 2 20 839 857 838 859 0.92

10 14 0.0003 0.018 16.4 1.4 2 23 878 899 877 899 0.96

11 14 0.0017 0.098 14.0 0.3 1 23 906 929 906 929 0.96

12 14 0.0004 0.023 16.0 2.5 2 23 945 966 944 966 0.97

13 14 0.14 8.3 8.0 1.0 1 23 971 994 971 994 0.88

14 14 0.00095 0.056 14.8 0.4 3 23 1004 1025 1002 1025 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.3	1.4e+02	4.1	0.6	2	14	60	72	59	73	0.88
2	14	0.004	0.24	12.8	1.1	2	23	629	650	628	650	0.97
3	14	7.6e-06	0.00044	21.4	4.7	1	23	655	677	655	677	0.97
4	14	0.00042	0.025	15.9	8.3	3	23	685	705	683	705	0.96
5	14	0.00049	0.029	15.7	0.6	1	23	710	733	710	733	0.92
6	14	1.5	89	4.7	0.5	2	20	742	760	742	764	0.89
7	14	0.16	9.5	7.8	1.5	2	23	779	800	778	800	0.96
8	14	2.6	1.5e+02	4.0	0.3	3	23	810	831	808	831	0.84
9	14	0.98	58	5.3	0.1	2	20	839	857	838	859	0.92
10	14	0.0003	0.018	16.4	1.4	2	23	878	899	877	899	0.96
11	14	0.0017	0.098	14.0	0.3	1	23	906	929	906	929	0.96
12	14	0.0004	0.023	16.0	2.5	2	23	945	966	944	966	0.97
13	14	0.14	8.3	8.0	1.0	1	23	971	994	971	994	0.88
14	14	0.00095	0.056	14.8	0.4	3	23	1004	1025	1002	1025	0.95

Sequence Information

Coding Sequence: ATGACGATATGTTGTGTTCCCGGGTGCCTCATAGCCCAAAGACCGGTGCACCGTTTCCCATGTCTCGGCAGTCGAGATCCCAACAAACAGAATTTAAATCTAATGTGCTTCAGATTGTGGCTGCAAAGGATTCAGAACCCTAAACTTGAACACATGACTCATGCTGAGATTTATAAAAGGTGCATGGTGTGTGATAAACATTTTAGCGAGCAGTCCCGGCAGGTAAACAACGGGAGGTACCTTAAGTTTGGGGCTTTACCCACTTTAAATTTACCAGATTTTACGCAGACTCCGACTGAAAAAAACTCGCTTGTTTGGGATGCTAAACTTATTTTGGATTCTAATGAGGTGAAGCTGGAAAATGGTTATGAGTTTGAAAATTGCCCCATTATTACTCAAGAAAATCTCAAAGAGTTTGGAGAAACGGAGATTCTTCCATTTCCTGCTCCAAATGGGCTGCATCCCTTGTTCCAAGACGAGGGCAACCGTACAAAAGTTGAAACTGTATTCATTGAAGATTTCTTTAAAACTAGTCCGCAGTCGTTTGTTTCCAATCCTCACAACAAGGATGAAGACAACGCTTTACaaataaccGAAGTACCTCATTGTGACGACGACGCATGCAGCGAGGCGTCGTTTCATTTCCCACTCGACGACGACGCTGATGACAAAAATGAAGTCATCTCGGTAGAATTCGAAAACGGGCAATTTCCCATCCAATTCCAGGTTCCCCAAAAGTCCATAAGAGAAAAGCGAAAAACCAGGAATAGTTTCCCGAAGATTAGGCTACGTAAGTCGAGGAAGAAAGTGAAGAGGGAGAAAAAAGTCACAAATGTTAACAACAAAATTGAAGGGGAAAATGtggaaaattctcaaatttataAACCAGAATTCGTTCAGGCGAACGAAAACCACGAAGTTTGTGTGGAAAATCCTCAAATTTATAAACCAGCATCAGTTCAGGCGAACGAAAACCACGAAATTTGTACTGAAAATCCTCAAATCTATAAACCAGAATCAGTCCCAGCGAATGAAAACCCCGAAATTTGTGTGGAAAATCCTCAAATTTATAAACCAGAATCTCATTTGGAAGATCATCACATAGACGAATTCCTGCAACAAATCGAAGATCAACAGAAATCGAAGAAAACTTCATGTCCGAAACGTCCGCCGTACTTCAAGGCCCTGAAAGTTCAGGAAAACTTCGTGGTGATGGAATTATGTCGAATCTGCCTTTACCCAATCATGGACGACAACTTCATAAAACTTTACGGACGAACTGGTGATTTTTTTTTGACGATGGTGCAGAAAATCTTGCCTCAGGTGGATTTTCAACTGTATTCCAATCAAGTCATCTGCGGGAATTGCTACGACGTTGCCACATCCGTTTTTAAACTAAGAGAAACGGCAACAGCGACCGAACTGCGATTGTTTAAGTTGATTCAGGAGAAAGGCGACGTGATGGTGGCTGAAGAAGATCTGTTGATTATTCAGCAATATGAAGCTGATGTACAGGAAGTGGTTTATGCAACCCCCAAACCAGTTGAAGCTCCAAAACCAAAGCAGAACAGAATTTTGGACGTTAGTAACGATGAAATAATAGTAAACGACGTGGATATGGGGGATGTGGTTAATGGTAACAAACTCAGCGAGCAAGCAGAGCAAATCGCTCCTTGGGAGATCGAAAACGAGAAAAACGATGCGGAAATTAAAGTGTGGAGCTTGGGGGAGACGTTTGACAAAACGGAAACTCCTAGTAAAAGTGACGAATTTCCTAGTAAAAGTGACGAATTTCCTAGTAAAAGTGAGGAATTTCCTAGTAAAAGTGAGGAATCTCCAGTGAAAGCTGGCAGTGACAATCAGAAAGAGGAAACGGGTGACAAAAGCTGCAATGTTTGTTGGAAAACATTCCGAACTGTCGCCGCTCGCAAGAGACATTCTCGCGTCCACCAGGACAAAAGTTTTTTTTGTCACATCTGCGGAAAAGCGTTCACCTACAAATCCAACTTGCACGTTCACGTGAAAAACCACGACACGGAAACGAAACACCTCTGCCACCTTTGCGGCAAACACTTCAACACCAAAGACAAGCTGAAGCAGCACGTGCGCAGACACAACGAACCGAAGTTCACGTGCAAAATATGCGAGGCCAATTTTAAGACCAAGTCGGGGTTTAAGAATCACGTGGAGGGGGAGCACGGCAAGGAGCCGTCGCAGGATCGCACGTGCGAGTTTTGCCTGCGCGTGCTCAAGAACAAAAAACTGTTGCTTGTCCATAAGGTGGATATGCACGGCTGGAATCCGGATATACCAAGGTCACACTTCAACACGTGGCAGTGTCACATCTGCTTCGAGGAGTTTAACGTGTACGTCGATAAAAAAAAACACCTTGAACGGCACGAGCGAAGCGAGTACTTGAGGATCAATTGTGAACTCTGCCCAAAGGTGTTTCTACGTGAAAAATTCGTCGTCAATCACGTCAAATTGAAGCATTTTGAATCGCCGTGGAGGCTCACCTGTCTATACTGCAAGGAAATTTTCGGTTTGGAATCCTCCCTCGCGTCACACACTGAAAATTGCCTGGAAAAAACCGAAGAACTACCGAACGAACCCGAAATTACCAACATAGTCACTTGTAAAATATGTGACAAGTCTTTTCGTTTGAACAGTTTAACCAACCATCTCCAGAAGTACCACAACTCCGACAGTTGGGAGTTTAAGTGCGACAGTTGTGAAGAGGCTTTTCCACTAAAATCCCTGCTGAAGCAACACATATTTTCCGAGCACGGAGAAAAAGGAGACGAAAAACCGCCTAAAGTAGTCGATACGTGGAATTGTCCTCTTTGCAATAGGCAGTTCACGAATAGATTCTCAAAGACTCGTCATTTGAGGACTCACGAGCCACCAAAGTATCAGTGCACGTTTTGCACGAAGCGGTTCAAGGAAGAACGCATTATGATAAGGCACGCTAATATGGTGCATAGGCCTAACGCTGATTGGAAGATCAATTGCGAGCTGTGTCTGAAGAGATTCGCCACCAAGGATAGCTTGGAGTACCATAAGAGGGTGATTCATAAGTACGAGACTGTACCTAATGAATTGCTGGTGATAGAAAATGTGgatctgtaa
Protein Sequence: MTICCVPGCLIAQRPVHRFPCLGSRDPNKQNLNLMCFRLWLQRIQNPKLEHMTHAEIYKRCMVCDKHFSEQSRQVNNGRYLKFGALPTLNLPDFTQTPTEKNSLVWDAKLILDSNEVKLENGYEFENCPIITQENLKEFGETEILPFPAPNGLHPLFQDEGNRTKVETVFIEDFFKTSPQSFVSNPHNKDEDNALQITEVPHCDDDACSEASFHFPLDDDADDKNEVISVEFENGQFPIQFQVPQKSIREKRKTRNSFPKIRLRKSRKKVKREKKVTNVNNKIEGENVENSQIYKPEFVQANENHEVCVENPQIYKPASVQANENHEICTENPQIYKPESVPANENPEICVENPQIYKPESHLEDHHIDEFLQQIEDQQKSKKTSCPKRPPYFKALKVQENFVVMELCRICLYPIMDDNFIKLYGRTGDFFLTMVQKILPQVDFQLYSNQVICGNCYDVATSVFKLRETATATELRLFKLIQEKGDVMVAEEDLLIIQQYEADVQEVVYATPKPVEAPKPKQNRILDVSNDEIIVNDVDMGDVVNGNKLSEQAEQIAPWEIENEKNDAEIKVWSLGETFDKTETPSKSDEFPSKSDEFPSKSEEFPSKSEESPVKAGSDNQKEETGDKSCNVCWKTFRTVAARKRHSRVHQDKSFFCHICGKAFTYKSNLHVHVKNHDTETKHLCHLCGKHFNTKDKLKQHVRRHNEPKFTCKICEANFKTKSGFKNHVEGEHGKEPSQDRTCEFCLRVLKNKKLLLVHKVDMHGWNPDIPRSHFNTWQCHICFEEFNVYVDKKKHLERHERSEYLRINCELCPKVFLREKFVVNHVKLKHFESPWRLTCLYCKEIFGLESSLASHTENCLEKTEELPNEPEITNIVTCKICDKSFRLNSLTNHLQKYHNSDSWEFKCDSCEEAFPLKSLLKQHIFSEHGEKGDEKPPKVVDTWNCPLCNRQFTNRFSKTRHLRTHEPPKYQCTFCTKRFKEERIMIRHANMVHRPNADWKINCELCLKRFATKDSLEYHKRVIHKYETVPNELLVIENVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -