Basic Information

Insect: Pycnomerus fuliginosus
Gene Symbol: RREB1
Assembly: GCA_963924575.1
Location: OZ004617.1:5792487-5797150[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.7e-05 0.0034 18.6 0.8 1 23 59 81 59 81 0.99

2 15 0.002 0.12 13.8 0.3 1 23 94 116 94 116 0.98

3 15 7.2e-06 0.00042 21.5 4.2 1 23 122 144 122 144 0.99

4 15 0.69 40 5.8 0.5 2 23 230 252 230 252 0.96

5 15 0.51 30 6.2 0.6 1 20 298 317 298 319 0.93

6 15 0.14 8.4 8.0 0.1 1 23 456 478 456 478 0.96

7 15 1.6e-05 0.00095 20.4 0.8 1 23 487 509 487 509 0.99

8 15 0.0017 0.097 14.1 3.1 1 23 515 538 515 538 0.97

9 15 0.00098 0.058 14.8 3.0 1 23 937 960 937 960 0.97

10 15 0.0011 0.065 14.6 0.5 2 23 1177 1198 1176 1198 0.97

11 15 0.25 15 7.2 6.3 1 23 1204 1227 1204 1227 0.97

12 15 0.008 0.47 11.9 0.9 1 20 1255 1275 1255 1276 0.96

13 15 0.86 50 5.5 0.7 1 23 1334 1357 1334 1357 0.93

14 15 0.033 1.9 10.0 0.4 3 23 1404 1424 1402 1424 0.93

15 15 0.015 0.87 11.0 5.9 1 23 1430 1452 1430 1452 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.7e-05	0.0034	18.6	0.8	1	23	59	81	59	81	0.99
2	15	0.002	0.12	13.8	0.3	1	23	94	116	94	116	0.98
3	15	7.2e-06	0.00042	21.5	4.2	1	23	122	144	122	144	0.99
4	15	0.69	40	5.8	0.5	2	23	230	252	230	252	0.96
5	15	0.51	30	6.2	0.6	1	20	298	317	298	319	0.93
6	15	0.14	8.4	8.0	0.1	1	23	456	478	456	478	0.96
7	15	1.6e-05	0.00095	20.4	0.8	1	23	487	509	487	509	0.99
8	15	0.0017	0.097	14.1	3.1	1	23	515	538	515	538	0.97
9	15	0.00098	0.058	14.8	3.0	1	23	937	960	937	960	0.97
10	15	0.0011	0.065	14.6	0.5	2	23	1177	1198	1176	1198	0.97
11	15	0.25	15	7.2	6.3	1	23	1204	1227	1204	1227	0.97
12	15	0.008	0.47	11.9	0.9	1	20	1255	1275	1255	1276	0.96
13	15	0.86	50	5.5	0.7	1	23	1334	1357	1334	1357	0.93
14	15	0.033	1.9	10.0	0.4	3	23	1404	1424	1402	1424	0.93
15	15	0.015	0.87	11.0	5.9	1	23	1430	1452	1430	1452	0.98

Sequence Information

Coding Sequence: ATGGATGCATCACCTGAACCAAATTTACTCGCCAAAGATAAGCTCTCCAACCAAAGTAACCATAGCGATTCAGGGATTTTCTCAGTCACCGGAAGCTCAATGGATGTGTCAAGTCGCACTACCAACTCCGAGCAAGAAGACAATCGAAGTGACTGCAGTTCACCAGAACGAAAATACGTCTGTCCCATTTGTGATACAATGCTGACTTCGCAACACGAATTCACTCTTCATATTCGATCTCATAATAACGAATCTGAGGTACAAGACAACGAAAAAGGCTTTACTTGTCGAATTTGTCTGAAGGTCTTAAGTTCCAGTTCTAGTTTAGATCGACACGTTTTAGTGCATAGCGGAGAAAGACCTTTCCAGTGTAAATATTGTGGAGACACTTTTACTACAAACGGTAACATGCATAGACACATGCGGACTCATACTCATAAAAGCGAAAATTATGAATCTGATACAAGTTCAGATAGCTCAAAAAGCACGGAATATAATAACAATAAGGTTGACTCGAAGAAAAGGAAACACGAAAGTGATGTCGAGCATTCCAGCAAGAGGCAGGAAAGTTCAAGTGATGGTGAAAATTTTCAAACGTACAAATGTCCTGTGTGTGAAAGGAGCGACTTTGATTCCATGCTAGTCTTAGACACGCATTTAGAAGACAATCATCCAGATTATCCAGCGAAATGCAATCAATGCCAACAGATCTTTCTAAATAATAAGCAGTTGGGTATACACCGTGCTACGGTCCATGATAGCATCACTCCCAAGCATCATGTCATGGGTTTCAAAGATCTCACCTTCGTCGACTTTTCTAGCGAGAAGTTTCCGCACATTGCTCGTTACGAATGCGAGAAAAATTTACATAAAGTTTCCGGGGGACTGAAATTCCAATGCAAGAAGTGTCTACGAGCTTTTCCTTGTGCCAGTTCTTTAGAAATTCACGAAAAAGACTGTGTTCTCAATTCGGAAATTGGCGGCTTAGACTTGTCAAAACCAGGACAAATTTCCGAAAACGAGATAAGACGAAACGAATTCTTCTCGAGACTGAATCTGCAAGATAATTCTCCTGAGAAAACATCTCCACCATCTCGACTTGGCGAGACTTCAGCAAAACTCAGACAACAACTGTTGACAAAAGCCATGTCGTTAGATTCAACGAAGGATTTAGCTGATATTCAATCCATCATATCCATGACTAGTAAGGGAAGTCTTTTTCAACAGCTACAGGCGAAGAATGAAGTTAATTTGCATCAGAAACCTAATTTAGATTCGTCTCATGAAGTGGGTCGATCAGAACAGGAAGAAGAGTCTCAAGACTTGTTCGCGGTGGAATTTAGGAAAATGAAATTGCGAGGTGAATTTCCATGCAGACTGTGTACCGCAGTATTTCCCAATTTGAGGGCTTTGAAGGGACACAACCGCGCCCATCTCAACGGTAATACTAACGGAATGTACCGTTGCAATATGTGCCCGCATTCTTCCATTGATAAAGCTGCCTTAATCAGACACATGCGAACGCACAATGGCGACCGTCCTTACGAATGCTCACTTTGTAATTATGCATTCACGACGAAAGCTAATTGCGAAAGACATTTAAGGAACAGGCATGCGAAGACTACGAGAGAAGAAGTGAAGAAGTCCATCATTTACCATCCCTCTGAGGATCCAACTAACGAAGACTTAAACAAACTCACTGTAAAAGATGACACCAAAAAGAGTTCAGCTGCAAACCAAATAAACGACATAACGCCAGAAAAACTACATTCCACCACACCCAAGTTGTCAGAAATGAAAAGCAATATCCCTGACATCAATAAACCCGATTTGGCTCCATTGATACCAAGTTTGTTGAAAGACACACTAAACATTCCGCTGGCCAAGGAGTCGCCTAAAATTTTCTCGAATATTTCCGATATTATTAGAAACGAAAATTTGAAAACTCTCAAGGAGCATAGACTTCAAAACGGAAGTCCGCTATCACCATATCTGCATCCGCAATACCACTTCTCGCCAAATCATAACAACATATCCACTCCACAAGATCTACCTTCCAAAATACATATCAAGAATTTAGAGGACCTCACGGAGACAACTTCCGAACATCAGTCTGACGAGGAAAATTACGACCATGACAACGAACCTATGGATCTGAGCAAAAAGAAAGACACCGAAATCAAAGACGAACCTTTCCCCGAGGATCTGTCCAAAAAAGTTCCCTCTTTTAACCCTCAGTTAAACATGGGGGAGATTTTTGCGCAACAGCTTTTGAAGACACCTCCAAAAATTGACCCCGCGGCCTTGTACGCCACTCAGTTAGCTCTATGTCGAAATTCATTCCCAGGATTTCCAGCATGGACGAACTTTCCCATCAATCCGCTTCTATTCCAATCACTCCAGTCGCCTATTTTACCTCAAGATTCTCCAGATATAAAAGAAAGACTGCAACGGTTCCAGCTTTGCGGAGGTACGATGATTAGTGACAATTTCACCGAACGTTTGAAAAGTCTTCAAAGTTATCGCCCTCCAGCTCCTATGTACAACTCTTTTAAGGTGAACGAAATCAAGCCCGAAATAAAATGCGAGTCAGACTTCGGATCGACTACCCCAAAAGTCGAAGATATACAACCGTTGAGCTTAAACATCGACgctaattttaatgaaagcttttCGAAGCTTCACAGTCCCGTCCATCAAACACCAAAACAGGAAATGGTCCAGTCCCCAAATTCCGTAAAGATGGTTATTAAGAACGGCGTTTTAATGCCTAAACAAAAGCAAAGAAGGTACAGAACTGAAAGACCTTTCACTTGCGAACACTGTTCTGCCAGATTTACCTTGCGTTCAAATATGGAGCGACATATTAAGCAGCAACATCCACAATTCTGGTCGCAGAGACAGCGAGGACACGTTAGCACTCCTGGTAGAAAAAGTCAGTCGAGTGCAAAGCCCAGTTTTTGTGATCTCAGTATACCAAACTACGATATGCCAAAGACGCAAGATTTTGATGAAACCAAAGAGCAAATTGACGacaagctgaaatttgctattcTGGCGCATCATTTAAGAGCGAATCAATCAAATCAAGATGTCAAACGAGAGGAAGATGATGACTGTGCCCTAATAATTGACGAGAATGCAGAACAGCAAAAGACTGACTTATTAAACCAAAGAAGTGTTGAATCTTTCGAAAGAACCCGCATTTTGGAAGAGAAATTGCGGGAGTTGCACGCAAAGCAATTGAAATGCGACAATAAGATAAAGAGTGAAGAAAATCAGGATTTAGTTCCGGTTTCCAGACTGCTTGATAATGCTTCGCAGCAACAATTTAAAGAGTATTTTAAAAGAGACGCTGAAGAAACAGAAGTTGGTGGCGGAAGTGAAGAAGATGAAGAAGGCCTGGTGGCCAGCGGAAGCACGAGCGAAGGAAATATATCCGGAACAGATGAGAATAAATCTGAATCCGAAACAGCAACGGCTCCAGTTAAAAAGAAATCAGCTTACTCCATGGCACCGAATAGGGTCAGTTGTCCTTTCTGCAGCCGCAAATTTCCATGGAGTTCTTCTCTGCGCCGTCATATCTTGACCCACACAGGACAAAAACCATTTAAATGTAGCCACTGTCCATTATTATTCACCACAAAATCAAATTGTGACCGCCACTTGCTGAGAAAACACGGCAGCAATGCTACGACCATCACCAACGACGCTATTAACAACAATACCAATTACTTGATGCGAAACGTTCCCGAGAGACCATTTAAATGTTCAGATTGTCCCAGTAGTACCTTCTCTACATACTCGAATTTGAAAAAACATATCTCTTGTAAACACTCCGCAAACGCCCAAGCAGACGATATTAAAGCTCAAGGTTATGAAGCAGGAAGCTCAGAGGATGAGAAAATGGCGATAAATGAATCCAAAAGCGAATGGGATAATCACCCGCATAAGAATAACGACGTTCAAAATGTAATTGTTCCAAATTCGGATTTACCTTTCAAATGCCACCTGTGTGAAGGCTCTTTCGCTGAACGTCAAGATGCTCTAGATCACATAAAGGACAAACACTACTCCGAGTACGACTTGTTGATGTCAAAGAATGCTTTGGATAACAACGCCTCGACACCAGACGAAGCTGCACATCATGAAGACGAAGAAAGTGACGTCAGAGGTAAATTCCCTGACTATTCCAACCGCAAAGTTATTTGCGCATTCTGCATGCGTCGTTTTTGGTCAGCAGAAGATCTGAGAAGGCATATGCGGACTCATACAGGGGAAAGGCCATTTAGTTGCGACATTTGCAGACGTAGATTTACGTTAAAACACAGCATGTTGCGTCACAGAAAAAAACATAATGTGAATTTTGAACATGAAAACATAAACAGCGACGAAGACGGAAATAATTTTCCGACGACCTTGGAAAGTCTTTCCCATGCTGATAACGGACAGAAGCATGGAGAGCGAACAGAAGAATCGGATGGAAACGAAGGAAGTGATTTAATAAGTAATTTATTAGGCATAAGAGATAGATCCTTTATTGACAAAGTTCTCACGGCATCTGCAGATGATGCCGCTAAATTATTGGGGGTTAAAAACGGGGTTAAAGAGTAA
Protein Sequence: MDASPEPNLLAKDKLSNQSNHSDSGIFSVTGSSMDVSSRTTNSEQEDNRSDCSSPERKYVCPICDTMLTSQHEFTLHIRSHNNESEVQDNEKGFTCRICLKVLSSSSSLDRHVLVHSGERPFQCKYCGDTFTTNGNMHRHMRTHTHKSENYESDTSSDSSKSTEYNNNKVDSKKRKHESDVEHSSKRQESSSDGENFQTYKCPVCERSDFDSMLVLDTHLEDNHPDYPAKCNQCQQIFLNNKQLGIHRATVHDSITPKHHVMGFKDLTFVDFSSEKFPHIARYECEKNLHKVSGGLKFQCKKCLRAFPCASSLEIHEKDCVLNSEIGGLDLSKPGQISENEIRRNEFFSRLNLQDNSPEKTSPPSRLGETSAKLRQQLLTKAMSLDSTKDLADIQSIISMTSKGSLFQQLQAKNEVNLHQKPNLDSSHEVGRSEQEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNTNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNEDLNKLTVKDDTKKSSAANQINDITPEKLHSTTPKLSEMKSNIPDINKPDLAPLIPSLLKDTLNIPLAKESPKIFSNISDIIRNENLKTLKEHRLQNGSPLSPYLHPQYHFSPNHNNISTPQDLPSKIHIKNLEDLTETTSEHQSDEENYDHDNEPMDLSKKKDTEIKDEPFPEDLSKKVPSFNPQLNMGEIFAQQLLKTPPKIDPAALYATQLALCRNSFPGFPAWTNFPINPLLFQSLQSPILPQDSPDIKERLQRFQLCGGTMISDNFTERLKSLQSYRPPAPMYNSFKVNEIKPEIKCESDFGSTTPKVEDIQPLSLNIDANFNESFSKLHSPVHQTPKQEMVQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGHVSTPGRKSQSSAKPSFCDLSIPNYDMPKTQDFDETKEQIDDKLKFAILAHHLRANQSNQDVKREEDDDCALIIDENAEQQKTDLLNQRSVESFERTRILEEKLRELHAKQLKCDNKIKSEENQDLVPVSRLLDNASQQQFKEYFKRDAEETEVGGGSEEDEEGLVASGSTSEGNISGTDENKSESETATAPVKKKSAYSMAPNRVSCPFCSRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGSNATTITNDAINNNTNYLMRNVPERPFKCSDCPSSTFSTYSNLKKHISCKHSANAQADDIKAQGYEAGSSEDEKMAINESKSEWDNHPHKNNDVQNVIVPNSDLPFKCHLCEGSFAERQDALDHIKDKHYSEYDLLMSKNALDNNASTPDEAAHHEDEESDVRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFEHENINSDEDGNNFPTTLESLSHADNGQKHGERTEESDGNEGSDLISNLLGIRDRSFIDKVLTASADDAAKLLGVKNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -