Pful014503.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pycnomerus fuliginosus
Gene Symbol
-
Assembly
GCA_963924575.1
Location
OZ004619.1:39072463-39092644[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.38 22 6.6 3.3 1 23 291 313 291 313 0.92
2 13 1.9 1.1e+02 4.4 2.4 2 21 318 339 317 343 0.84
3 13 0.0049 0.29 12.6 3.1 1 23 385 408 385 408 0.95
4 13 4e-05 0.0023 19.1 3.3 1 23 414 436 414 436 0.95
5 13 0.0034 0.2 13.1 2.5 1 23 450 473 450 473 0.95
6 13 2.3e-06 0.00013 23.1 2.3 1 23 479 501 479 501 0.98
7 13 0.0031 0.18 13.2 3.0 1 23 507 530 507 530 0.97
8 13 8.5e-05 0.005 18.1 1.6 3 23 538 558 538 558 0.98
9 13 1.5e-06 8.7e-05 23.6 0.5 1 23 564 586 564 586 0.99
10 13 2.8e-05 0.0016 19.6 3.1 1 23 592 614 592 614 0.99
11 13 0.12 6.9 8.2 8.7 1 23 620 642 620 642 0.98
12 13 2.1e-05 0.0012 20.0 0.7 1 23 648 670 648 670 0.98
13 13 8.7e-08 5.1e-06 27.5 0.5 1 23 676 698 676 698 0.99

Sequence Information

Coding Sequence
atggaGACAACGGAGCTGTTGTGTGCTTTGCCAATTTGTAGATTATGTGGAGAGGAAAGCGTAAACGGAAACGATTTATCTTCAACGGAAAATGGACAGGAATTATGtgaattaattaataaatatttgcCACTCAAAGTGGAAAATGATGGCAAGTTTCCTTCGAAGATATGTCCAGGATGTAATATTCAACTGGAGGCAACGAAGTCGTTCATGGAGTTGATCGTTGAAGGACAGAGCAAGTTGAGGCAGTTGTATAAAATGCAACAGGATAAACTGCACCGACAGGAAAAACAGAGGCAGCAATTGGAGGAAGTTTTAAAAAGTGTTAATCCAAATTCGAGTGTTGATACGTATACCATAGAAGCCGATGAGTCTGGAGAGAAGTTCGTGATACAAATCTTCTCACAAGGTCCACTTTTCCCGCCGGAACATGAACTGTCGTTGAGAACGGAAGGTTTAACGAAACCCAAAAGAAAAAGGGGCCGGCCCCCGAAAACCTCCCAACCAAAGCCCGAAGACAATTCAGGCGCAGGATCGACACCGGTAGCTGAAATAGAAAATGTTGAGGAAGAAACCGAAGATGGTAAAAGAAAACGCAAGATTAAGGTACCGACCCGTTACCTCGAGGCAATTCAAGGGAAGGAACTGGAAAAGGTTTTCAAGCAGGAGGGTGTGATTGACGAGGAAGAATTTATTTTGGAAGAAAAATCTTTTGCTGTTTCTGATCCCTCCAAGACAGATGAGGTGATTGGTAGGATAGAAGATGAAAACGGAGAGGATTTGGGGGAACCTGTTGTCATTCGTAGAACAGCAAATAGACCCAAACCAAAAGTAAAATTTAGTGGTCCCTCAAGGAAACGTAGAAGATACCAATGCGAGATTTGCGGCCGTGAATTTTTACACCACGGTCGATACGAGTTGCACAAGAAACTCCATGAAGTCGAGTACAGTTGCTGTGAAGAGGGTTGTGATTTCAAATGTGGTAAAAGGTCGGAGCTTGCACTACATCAAAAAGACACCGGTCACTCGGGACTCACAGCCACAGAAAAACTAGACGAATACGGAACAATAGAGCTGCCGTCCGATCTGAAGAACGAAAGCACGACGGACGATAAAAGTGATAAAGGCAAAGTCCCGACGAAAAAGTCGTTCATGTGTGAAAAGTGCAACAAAAGTTTCAGCTGCAAGCAAAACTACGAGGTACATCTGAAGGCCGTGCATGGGGGTGAACGGCCCTTCCTTTGCAAAGTGTGTGATAAAACGTTTTCGTATTCGCACAGTTTGAAAATCCACCAACTTCAACATTTTTGCAAGACCGAGATCGAGGAACAGACAACTCCTCAGTATCGCTGTCTCACTTGTATGAAGGTGTTTCGGCATCCGAGTAGTTTGCAGTATCATCGAGATTCGGAACATACTAATGGGCGAAGATTTGTGTGCAACATCTGCAACAAACCTTTCAAGCATCGCCAACTCCTCCAACGCCACCAGTTGGTCCATTCCGACGAGCGCCCCCACCGCTGCTCCCAGTGCCTCTCCGCCTTCAAGACCCGCGCCAACTTGATCCACCACGCCCGCACGGTGCACGCGGGCGAAAGAACCCACTGGTGCGTCCAATGCGGTAAAACCTTCGCCCACAAGACGGCCCTAAACCTGCATCAAAGATGGCACTTGGGCGTGCGCCCCTACGAGTGCGATTTCTGTCAAAAGGCCTTCTCGCAAAAGGGCAATCTCGCCGAACACAGACGGATCCACACCGGAGAGAAACCATACCAATGCGATATTTGCCGCAGGGCCTTCACGACGTCCTCACAGTATAAACTGCACAAAAAGAGGCACTTGGACGAGAGGCCGCACAAATGCGAGTACTGTCCTAAGAGTTTCCTGCATAAGGTCACTTTGAGGTGCCACATGCGGAGACATTTCGATGAGAGGCCTTACAAGTGTCAGTACTGTACGAAGAGCTTTGCGGAGGCTTGGGCCCTTAAGAAACACGAAAGGCTGCATACGGGGGAGAAGCCGTATAAATgtgatatttgcgaaaaagccTTCGCTGATAACTCAAATTTGGCGAAACACAGGAAAACTCATCGATCTTTGAAGTCTCTCACAGaaAAGCAAATGCTGTACGTCACGTACGAAAAAGAAGGAGGAGATGCAATTGTTACGTACATTGAGCCTCAAGATCCGATGCTGGAGAATGAAGTCATCGACGTAACAGAAGAAGCAGTTCAGTTACAGCAGTTCGTGGATGAGGAAGGGAATCCCATAAGTTTCACAACGCAAGATGGGCAACAAGTAAAGATGGTCGTTAGCAATGAAAACGGTCAAGAAAACATTCAAGGGTTACTGCCTGACGGTAGTTTGGTTCCCATAAATATTACGTCAATGGCAGACAAAAGTAAACCCATAATTACCATTCAAAACAATTTCCCTCCACAGAAAATGAATGAGTTGGATTTCGACAAACAAATATTAACAAACACAATTGAGTTCCTATCTGAAGATGATCCGAAGAGTAATAACATACAATTTGTTACAGATGAAAATCAGGGCATGTGTTTAGTCACAACTTATAACGTAGATGACTCCATCAATAATCAATACCTTAATATTTCATAG
Protein Sequence
METTELLCALPICRLCGEESVNGNDLSSTENGQELCELINKYLPLKVENDGKFPSKICPGCNIQLEATKSFMELIVEGQSKLRQLYKMQQDKLHRQEKQRQQLEEVLKSVNPNSSVDTYTIEADESGEKFVIQIFSQGPLFPPEHELSLRTEGLTKPKRKRGRPPKTSQPKPEDNSGAGSTPVAEIENVEEETEDGKRKRKIKVPTRYLEAIQGKELEKVFKQEGVIDEEEFILEEKSFAVSDPSKTDEVIGRIEDENGEDLGEPVVIRRTANRPKPKVKFSGPSRKRRRYQCEICGREFLHHGRYELHKKLHEVEYSCCEEGCDFKCGKRSELALHQKDTGHSGLTATEKLDEYGTIELPSDLKNESTTDDKSDKGKVPTKKSFMCEKCNKSFSCKQNYEVHLKAVHGGERPFLCKVCDKTFSYSHSLKIHQLQHFCKTEIEEQTTPQYRCLTCMKVFRHPSSLQYHRDSEHTNGRRFVCNICNKPFKHRQLLQRHQLVHSDERPHRCSQCLSAFKTRANLIHHARTVHAGERTHWCVQCGKTFAHKTALNLHQRWHLGVRPYECDFCQKAFSQKGNLAEHRRIHTGEKPYQCDICRRAFTTSSQYKLHKKRHLDERPHKCEYCPKSFLHKVTLRCHMRRHFDERPYKCQYCTKSFAEAWALKKHERLHTGEKPYKCDICEKAFADNSNLAKHRKTHRSLKSLTEKQMLYVTYEKEGGDAIVTYIEPQDPMLENEVIDVTEEAVQLQQFVDEEGNPISFTTQDGQQVKMVVSNENGQENIQGLLPDGSLVPINITSMADKSKPIITIQNNFPPQKMNELDFDKQILTNTIEFLSEDDPKSNNIQFVTDENQGMCLVTTYNVDDSINNQYLNIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-