Basic Information

Insect: Pycnomerus fuliginosus
Gene Symbol: -
Assembly: GCA_963924575.1
Location: OZ004621.1:20927836-20933967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.2 1.3e+02 4.2 2.0 1 21 157 177 157 178 0.91

2 20 0.29 17 7.0 4.8 1 23 207 230 207 230 0.92

3 20 0.25 15 7.2 0.2 5 19 240 254 237 257 0.91

4 20 0.056 3.3 9.2 0.4 1 23 263 286 263 286 0.91

5 20 0.00028 0.016 16.5 0.4 3 23 368 388 366 388 0.97

6 20 0.11 6.5 8.3 0.7 1 23 406 427 406 427 0.88

7 20 0.0012 0.07 14.5 0.4 2 23 431 452 430 452 0.96

8 20 5.2e-05 0.0031 18.8 0.2 2 23 479 500 478 500 0.97

9 20 0.11 6.5 8.3 0.8 1 23 520 543 520 543 0.95

10 20 0.013 0.74 11.3 1.9 2 23 557 578 556 578 0.97

11 20 1.6e-06 9.6e-05 23.5 6.3 1 23 603 625 603 625 0.98

12 20 0.22 13 7.4 0.2 3 23 639 660 639 660 0.93

13 20 0.00018 0.01 17.1 1.6 1 23 679 701 679 701 0.98

14 20 0.00019 0.011 17.0 0.8 2 23 717 739 717 739 0.96

15 20 0.0077 0.45 12.0 2.3 1 23 754 776 754 776 0.92

16 20 2.3 1.4e+02 4.1 1.2 1 23 805 828 805 828 0.92

17 20 0.031 1.8 10.1 1.0 2 23 839 860 838 860 0.96

18 20 0.00047 0.028 15.8 3.5 1 23 871 894 871 894 0.96

19 20 2.6e-05 0.0015 19.7 0.9 1 23 903 925 903 925 0.98

20 20 0.0045 0.26 12.7 0.1 1 23 940 963 940 963 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.2	1.3e+02	4.2	2.0	1	21	157	177	157	178	0.91
2	20	0.29	17	7.0	4.8	1	23	207	230	207	230	0.92
3	20	0.25	15	7.2	0.2	5	19	240	254	237	257	0.91
4	20	0.056	3.3	9.2	0.4	1	23	263	286	263	286	0.91
5	20	0.00028	0.016	16.5	0.4	3	23	368	388	366	388	0.97
6	20	0.11	6.5	8.3	0.7	1	23	406	427	406	427	0.88
7	20	0.0012	0.07	14.5	0.4	2	23	431	452	430	452	0.96
8	20	5.2e-05	0.0031	18.8	0.2	2	23	479	500	478	500	0.97
9	20	0.11	6.5	8.3	0.8	1	23	520	543	520	543	0.95
10	20	0.013	0.74	11.3	1.9	2	23	557	578	556	578	0.97
11	20	1.6e-06	9.6e-05	23.5	6.3	1	23	603	625	603	625	0.98
12	20	0.22	13	7.4	0.2	3	23	639	660	639	660	0.93
13	20	0.00018	0.01	17.1	1.6	1	23	679	701	679	701	0.98
14	20	0.00019	0.011	17.0	0.8	2	23	717	739	717	739	0.96
15	20	0.0077	0.45	12.0	2.3	1	23	754	776	754	776	0.92
16	20	2.3	1.4e+02	4.1	1.2	1	23	805	828	805	828	0.92
17	20	0.031	1.8	10.1	1.0	2	23	839	860	838	860	0.96
18	20	0.00047	0.028	15.8	3.5	1	23	871	894	871	894	0.96
19	20	2.6e-05	0.0015	19.7	0.9	1	23	903	925	903	925	0.98
20	20	0.0045	0.26	12.7	0.1	1	23	940	963	940	963	0.94

Sequence Information

Coding Sequence: ATGGCAACGATTTTAAAATTCGAACAGCAGACTCCTAACACTAGGTTCGTCACCGTCCTTGCTATACAGCACGATATAACGATCAAAAGTAATTTGATCGAGGCTCGAGTCGCCCTCCAGAGAGTTAGACTGGTTTTGGGCTTACTAGTTCTCGTCAGTTCCTCGAGCCAGGACGACCAATCCCAAACCTCCATCGACTCCCAACCCCTCGAAGAACCCCCCAACCAGGACCCCCCCAACGAAGAAGGAAAGATCTTGTTCGCAGCAGGCCTCAAACTGCTGCAACGCAACGGAACCCCCCCAATCTCACACGAAACCCTATCCAAAATCGAATACAGCTACACAGAAAAGTGCAAGGCCATGGCCAACATGTACAGAACACTAAAATGCGCATGCCACAACGTAAGCCACCCCAACCTGAAGGGTCTTCTGTCTCACTTGCGAGCACTCAGGATATGGTTTCCCGTCTTCACCTGCTACCACTGCATGATCACTTTTACAGACAGATCGGCCAGCACCAAGCACTATCTCAAATGTCCGAAGACTAACCTCGAAACATTGGTGAAACTCTCGAATCTCAAGAAGAGGAGCGAAGTTAAAACGAGACTGTACCAAATCTACCAATGTACAGATTGTAAGTTTATGTATAGTTTTCACGAGGATTTCTGCACGCACGTGGACGAGGAACATTCGGAAATTGAGCTACCGCATACTTGTACTTGTGGCAGGGTTTTTACAACCCTTGAAGACTACAAAGACCACGCTTATATTAGCTGCTTGGTGCAGTTTTATTGCGACATTTGTTTTGTCACTGTGAAGACTTTGGATGAATTCCAGAAGCACGCGAGTGAATTGCACGACAATTCTGAAGGGTTCATCCTCTTGCAAGATGATAACTACAGGCAGAGGCGAAGCATGCCTTCGCCTACTACTAGCCCTAAAACTCGCGGAGTCAAACGCGAATACACCGATGAAAGCAATATAATTTCGGGGAAGAGAAGGAGTTCTTACAAGCCGCCGATTATCGAACCGGAGTTGGAGGAAGAAAAAGAAGCGAAAGTGCTAAACCCCtacgttgtaaagagaatccaAGGGACTGCTTGTCCGATTTGCTTGAAGGAATATTCGAGCAACAATAACATGTGGAGGCATTACAAGACCCACATTCAGGATATTAAGTTTCAAGAAGCGGAGAAAGAAGAAGATGACGCTTTGTACTGCTGCCCTGACTGTGGTGGAATGTTTAATACTTCCGAGTGGGAGCAGCACAAAGTTATGCACAAAACGAAAAGTTGCGGGGAGTGCGGCAAAATATTCCAGTTTCAGTCTGAGCTGGACCAGCACAGAAGCGTACATTTGAATCTCAAAGTATACAGGGATTCGAAAACGCAGAGTTATAAGAGTACTTCAGTCACCCCTGACAATATAATGGTTATGTGCGAAATTTGCGATACTATGTTCCCGACTAAAGAACTGTTGAAGGCACATAAACTGACGCACGATACTATGCCAGTCTTGGAGAATAACGTCGATTCTGATGAGGGCAAAGACAATAAGTATCACTGCAAATTGTGCAATAAACCCTATGCCGCGTATGGAGGGTTGTGGTCGCACAATAAGAAAGAACACCCTGAAAACGCCACCCCACGTATTAAGGAGTATCCTAAACGGTGCAAAGTCTGCGACAGAGTTTTCTTCACAGGTTCTTCTTATTATAGCCACAAGCAGATGCACGAAAGAAACAACCAGTTGAAGAAGCAACAGGAAGAAGATCCGGAAGGAAACGATACTGAAGACGAATCGTACCACACTTGCAAGCGATGTTTTAAAGTGTTCTCCACCAAGTCCAATTTGAAGAATCACATGAGATCGCACGGAATGGCGGGTACTAAAAAGCAGACCAAGAAAGTTTGGTGCGATATTTGTCACGCTGGTTTCGAAACGGCGGAAGTATTGGAAAAACATAAAAGCGAGGTGCACGACGAGGAAATGCCCGTGCTTTCCGATGGCAACGAAGATATCAAAGCGTTCGTTTTCACGTGCGACATTTGCGTGCAAACGTTCACCTCTAGGAACGCTTTGAAGAAACACAAGGAAAAACATGCGAGGGAAGTGAAACCGTTTAGAAGCAAACCCCCAGTTGGGGCGGTTTGCAAACATTGCAAGGTTTCCTTCGATTCTCCGCAATTGTTGTTCGCTCATATGCGAGAAGAGCACATGGAAGCACCAAAGCAAAAACCAAAAGACAAACAGAAAGTTCACAGCTGCAAATTGTGCAAGAAAACCTACACGTCAGCTTTTGCTCTACACGCGCACGTAGGGTGGCACAAACGGGGGAAAGCCACAACAGTCCCTCCCGACGCCGAACAACCAATCAGCATCAAGCAGGAACCAGTCGAGGAACCCCCCAAGTTTAAATGCAACACTTGCAACACGTTTCACCCAAACGACACAGCGTTGCAAATCCACATTTTGGAGAAGCACAGAAACGTCAACGCGATCGTGTTGCATTCCAGGTGTAGCAGTTGCAACCTCGACTTTGCCTCCCAAGACGAGTACGAGCAGCACAGGAAATTCCACGCAATGGTCGAAAAACAAGCCAAGAAAAGTTTCTGTTGCAGCCACTGTCCTGCCGCTTTCAGTCGAATCGATAATTTGAAAACACATGTGAGACAGTTTCACAAGGAGTTTCTACCCCGCCAGGAGTTTAAATGTCCGCAGTGTGATCGCAACTTCGATAAGCAGACCTCTCTGTCTATACACTTGAAGGTGCACGACAAGCAGAAGATGGTGGTTGCGAGCAGTTCCAAGCATTTGTACTCGTGCTCCATTTGTAATATGGGATTTGATTTGCCCAAGGATCTTAGGACGCATACTATACAGGCTCATCCCTTCTGA
Protein Sequence: MATILKFEQQTPNTRFVTVLAIQHDITIKSNLIEARVALQRVRLVLGLLVLVSSSSQDDQSQTSIDSQPLEEPPNQDPPNEEGKILFAAGLKLLQRNGTPPISHETLSKIEYSYTEKCKAMANMYRTLKCACHNVSHPNLKGLLSHLRALRIWFPVFTCYHCMITFTDRSASTKHYLKCPKTNLETLVKLSNLKKRSEVKTRLYQIYQCTDCKFMYSFHEDFCTHVDEEHSEIELPHTCTCGRVFTTLEDYKDHAYISCLVQFYCDICFVTVKTLDEFQKHASELHDNSEGFILLQDDNYRQRRSMPSPTTSPKTRGVKREYTDESNIISGKRRSSYKPPIIEPELEEEKEAKVLNPYVVKRIQGTACPICLKEYSSNNNMWRHYKTHIQDIKFQEAEKEEDDALYCCPDCGGMFNTSEWEQHKVMHKTKSCGECGKIFQFQSELDQHRSVHLNLKVYRDSKTQSYKSTSVTPDNIMVMCEICDTMFPTKELLKAHKLTHDTMPVLENNVDSDEGKDNKYHCKLCNKPYAAYGGLWSHNKKEHPENATPRIKEYPKRCKVCDRVFFTGSSYYSHKQMHERNNQLKKQQEEDPEGNDTEDESYHTCKRCFKVFSTKSNLKNHMRSHGMAGTKKQTKKVWCDICHAGFETAEVLEKHKSEVHDEEMPVLSDGNEDIKAFVFTCDICVQTFTSRNALKKHKEKHAREVKPFRSKPPVGAVCKHCKVSFDSPQLLFAHMREEHMEAPKQKPKDKQKVHSCKLCKKTYTSAFALHAHVGWHKRGKATTVPPDAEQPISIKQEPVEEPPKFKCNTCNTFHPNDTALQIHILEKHRNVNAIVLHSRCSSCNLDFASQDEYEQHRKFHAMVEKQAKKSFCCSHCPAAFSRIDNLKTHVRQFHKEFLPRQEFKCPQCDRNFDKQTSLSIHLKVHDKQKMVVASSSKHLYSCSICNMGFDLPKDLRTHTIQAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -