Pful018944.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pycnomerus fuliginosus
Gene Symbol
znf711
Assembly
GCA_963924575.1
Location
OZ004621.1:8447699-8459232[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.032 1.9 10.0 0.5 1 23 61 83 61 83 0.97
2 22 5.6e-05 0.0033 18.7 0.1 1 23 89 111 89 111 0.98
3 22 0.00032 0.019 16.3 0.3 2 23 117 138 117 138 0.97
4 22 0.00045 0.026 15.8 0.2 1 23 144 166 144 166 0.98
5 22 0.071 4.1 8.9 3.5 3 23 178 198 176 198 0.96
6 22 2.8e-06 0.00016 22.8 3.9 1 23 222 244 222 244 0.97
7 22 0.00011 0.0064 17.8 2.2 1 23 250 272 250 272 0.98
8 22 0.00025 0.015 16.6 0.8 1 23 278 301 278 301 0.96
9 22 0.14 8.3 8.0 4.7 1 23 311 334 311 334 0.96
10 22 1.3e-06 7.6e-05 23.8 0.5 1 23 407 429 407 429 0.98
11 22 4.6e-05 0.0027 19.0 3.1 1 23 435 457 435 457 0.98
12 22 0.00035 0.021 16.2 2.2 2 23 463 484 462 484 0.97
13 22 0.0042 0.25 12.8 1.0 1 19 561 579 561 583 0.93
14 22 7.6e-05 0.0044 18.3 0.7 1 21 586 606 586 607 0.96
15 22 0.00056 0.033 15.5 3.8 1 23 613 635 613 635 0.98
16 22 0.00026 0.015 16.6 4.4 1 23 868 890 868 890 0.97
17 22 5.1e-06 0.0003 22.0 1.8 1 23 896 918 896 918 0.98
18 22 0.0018 0.11 13.9 4.0 1 23 926 948 926 948 0.96
19 22 0.44 26 6.4 5.5 1 23 954 976 954 976 0.97
20 22 0.0011 0.063 14.6 1.8 2 23 1084 1105 1083 1105 0.95
21 22 7.6e-06 0.00044 21.4 0.4 1 23 1111 1133 1111 1133 0.98
22 22 0.015 0.91 11.0 0.4 1 23 1139 1162 1139 1162 0.97

Sequence Information

Coding Sequence
ATGTCTCAAAATCTGAGTAACGTGCCCATTTTAAATAACTACGAGGAAAACCTTCCCGACCACCAGGAGATACCCCCGGACTTTATAGAtggaaatatttttttcacAACTTTACCTCCCGTGAATGAACTTTTAACCTCTTGTGATGAACCCAAGGAGAAGCCTCGAGAATCCAGTAACTACGAATGCCCGAAATGTCTTGCGAAGTTTAAGAAAATCGGTTTGTTTAAAAACCACCTGAGCTGGCATCGGAGCTTGAAAAAGTTCAAGTGTGAAAAGTGCCCTGCGAGTTATAACGTAGAGAGTAATTTAAAGATTCACATGGCGATGCACGACAATAATAAGCCAAAGTGCCCCCTTTGCGGAATTTCCTTCCAAAGgtttgcgagtttaaagtcgcatttGATGTTGCACCAAGTTGAGGAGTTTTATCCTTGTGAGGATTGTGGGGCTGAATTCGAGAAAGAAGAGGAATTAAGTAAGCACCATCAGGTGCATTTAGGTGATCCACTCACTAATTCTGGAATGATTTGCAGTTATTGCAAGTTGCAGTTTGATAATTCCAAGAAATTTAATCAACATATTTCACATCATATTAAAGTGAAAAGAATGGTTCTGTCCAATAAGAAGTCAAGGAGGACTCATGGAAACAGAGTATATGAGCACATGTGTCATGAATGTCAGAAGAGTTTCTCTAAAGCCTCCTTGTTGGAAAGACATTTGCGAATTCACAGTGGTGAACGGCCTTTTGTGTGTCACCTCTGCAACAGGGGCTTCAACCAAAAGGGCACCCTACAGATCCACCTGACAAAGCACACAGGCGTGAAACCCTTCCAATGCACTTTATGTTCAGCGAAATTCAATCAGAAGGGTAACCTGAGGGTTCACGTGGAAAAAACTCATACAGCCCCCCAGCCGGGGGTTAAAACCTACAAATGTGGGTACTGTACTTGCATTTTCAAGAAAATTGCTTCTCTGAATGTGCACGTTACTAAATGTCATGCCAATGGTGATAACGTTGGTGATATTATGAGTCAGCTGAAGGCTTTAGAAGAGGCAGTAGATGAAAAGGCAGTAGAAGGAAATAAAGAAATTCTTAAAGAAATAAAGGAAAATAATTCTACTAAAGTTAGTTACGTGAAAGTGGCAGAGTCTTTCTTGGATGGCACTGTTAGGAGATATTTAGTGAAGCAGAGGAAAGTCAATGACGTCAGACTCTATATttgtagtgattgcagtaaagaGTTTAAGAAGCCCTCAGATCTGATTCGCCATACTAGAGTACATACTAAGGAGAAGCCATTTGTGTGTAAACATTGTGGGACCACTTATTCCCTCAAGGCGTCTCTCTTTTCTCACATGAAGTCCCACACCAACTGCAACCTGTCCTGCAAGTTCTGCACTACGAAATTCTCCACAGCTCGAAGTCTCAACGCCCACTTAAAGAAACATAAAGAACTTGTTTGGAGTAATGACCAAAAAGATGGGAAAAGTTTATGTTATAAACAGTGTGAAGTATGCGAGTCTTGGGTGTCAGAACAAGAGTTCAGTCAACACATTTCCACACATACTAATGGGGAACAGGAGAAAATCGTATATCAACAGTGTGAAGTATGCAACGAGTGGATGACGCAAAAAAACTCGAGTCAACATATTTTATCGCATCGTAACGAGGAGAAATTCGAGTGTGCTCAATGTGGAAAGATATTTCCAAACGCGTTTTCTCTGAGGGTTCATTGTGGAAAACACGGCGGGTTTATTTGTAAAATGTGCGGCAAGAAATTTCGCAGCAATGGAATTTTAAGGAGGCACATGAGGCAGTGCAAAAACGAACCCTTCACTTGTCCACATTGCAATAAAAAATTCGTCAAAGACAATTCATACAGAGCACATCTACAGAAACATAAAAAAGAGCCACCGGTTTGTTTGGAAAATGTACAAAACGTTGACGGACTGTCTTTGACTAATCTTCAAAACGTAAATGCTGAGCTGGATCAGAATTTTGTGTCGAGTTCGTTTCAAATTGTTGCTGAGAAGAACGAGGGTCAAGATTTAAATAACGTGCACACCATTTATATTAGCTGTGATGAGCTGTCGTTGGCTGATACTGGCGTTTATTCGCTGCTTAAAACACAGACCGCCGATTTGTTCTTCAATCCCCTCGAAGACGCCCAACAAAGCGTCCTCAACATCGAATCGTTAAACGCAGATTTCGAATCTCAGAACCAGGAAATGTACGCCAATCAAATGTTCAACGTAAACATGGACGAGCAAACTGTCAAAAACGTCAAATCCCCCACAGACAAGCCCACTAAAAACCTAGATCTGAACGTCAACGACAACATTTTGAACAACAACGCCCTCTACTCGAACTCGGAATTGAACTTATTCTTCAGTCTGGATCCGGAGATAATCGGAACGAGTGAAAATATGAATCTCAACGATATAAGTCCAAGCTTGAACGTGGAGCCGCCCCAAGAAAACCCCAAAAAAGAGGAAGAAGTGGACGAAAGTCTAACTTGTTGTAAAAAAAGTTTGAGTTACAAAGATACGAAGCATTTGAATCGGCCAGGTTGCGTCGGTTATAAAGCTGGGTTTATGCATAATTGCGTTCATTGTTTGAAGGGGTTTAAGAAGCAGTCGGATTTGatTAGGCATGTGCGCACTCATACCGGGGAAAGACCTTTTGCTTGTGACAAATGCGACAAGAGATTTACTTTGAAGTCAACTTTAGTGTCCCACCAGAGAACTCATAATCCTGTTAGTCACAAGCGTCACAATTGTGCGGTTTGTAATTCGTTTTTCTCATCGAAATCTAGCCTGAATGTCCACATGCATATGCATACAGGTGCGCGACCTCACCAGTGCACCTTCTGCCTAATGACGTTTCGAACGGCTGCGCACAGAAAATCCCACGAATCCACCCACCtcttgaaaagaaaatcaaaaaacaaAGCGACAACTCTTCTCGAGTCTGTAGCTTTGGACGTTTTAAATCCTCAACAAACTAGTACCGACATCCAACCTGCAATTAGTACCACAGATTTGGAAAATATTTTAGTAGTACAAGAACAGctaCAACTGCCGAATGGATCAATCCAGCTAGACCAAAACATTCTGCAACAATTGCAATCCTCCAATATTTTACTTCAAGACCAGTTTGCAACAATTCAACTCAACGACGGAATTTTCCTCAGCATCAAACCTGAAGAAGACAAGTCGAAACCAGTGGAGAAACCGAGAAATTTAGAATGTGATATTTGTCATAAGAAATACGCTTCCAAGGACGtcttgaggaaacataaaaagGCTCACGGAATCAATCGTAAATTTCCCTGCACCAAATGTGATAAAGGTTTTGATACCAAAGAGGCTTTAAATCGGCACGAGAAGGTGCATTTAGGGCTTAGGCCTTATTCGTGCTTGTATTGTGTGAATAACTTTACAAATGAAAGTGGTTTAGCGAGTCATGTAAAAAGGATGCATCAAGCTGTCAGTTCGTTGATTGGAGACTCATTTCTGAATTGA
Protein Sequence
MSQNLSNVPILNNYEENLPDHQEIPPDFIDGNIFFTTLPPVNELLTSCDEPKEKPRESSNYECPKCLAKFKKIGLFKNHLSWHRSLKKFKCEKCPASYNVESNLKIHMAMHDNNKPKCPLCGISFQRFASLKSHLMLHQVEEFYPCEDCGAEFEKEEELSKHHQVHLGDPLTNSGMICSYCKLQFDNSKKFNQHISHHIKVKRMVLSNKKSRRTHGNRVYEHMCHECQKSFSKASLLERHLRIHSGERPFVCHLCNRGFNQKGTLQIHLTKHTGVKPFQCTLCSAKFNQKGNLRVHVEKTHTAPQPGVKTYKCGYCTCIFKKIASLNVHVTKCHANGDNVGDIMSQLKALEEAVDEKAVEGNKEILKEIKENNSTKVSYVKVAESFLDGTVRRYLVKQRKVNDVRLYICSDCSKEFKKPSDLIRHTRVHTKEKPFVCKHCGTTYSLKASLFSHMKSHTNCNLSCKFCTTKFSTARSLNAHLKKHKELVWSNDQKDGKSLCYKQCEVCESWVSEQEFSQHISTHTNGEQEKIVYQQCEVCNEWMTQKNSSQHILSHRNEEKFECAQCGKIFPNAFSLRVHCGKHGGFICKMCGKKFRSNGILRRHMRQCKNEPFTCPHCNKKFVKDNSYRAHLQKHKKEPPVCLENVQNVDGLSLTNLQNVNAELDQNFVSSSFQIVAEKNEGQDLNNVHTIYISCDELSLADTGVYSLLKTQTADLFFNPLEDAQQSVLNIESLNADFESQNQEMYANQMFNVNMDEQTVKNVKSPTDKPTKNLDLNVNDNILNNNALYSNSELNLFFSLDPEIIGTSENMNLNDISPSLNVEPPQENPKKEEEVDESLTCCKKSLSYKDTKHLNRPGCVGYKAGFMHNCVHCLKGFKKQSDLIRHVRTHTGERPFACDKCDKRFTLKSTLVSHQRTHNPVSHKRHNCAVCNSFFSSKSSLNVHMHMHTGARPHQCTFCLMTFRTAAHRKSHESTHLLKRKSKNKATTLLESVALDVLNPQQTSTDIQPAISTTDLENILVVQEQLQLPNGSIQLDQNILQQLQSSNILLQDQFATIQLNDGIFLSIKPEEDKSKPVEKPRNLECDICHKKYASKDVLRKHKKAHGINRKFPCTKCDKGFDTKEALNRHEKVHLGLRPYSCLYCVNNFTNESGLASHVKRMHQAVSSLIGDSFLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-