Pful008688.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pycnomerus fuliginosus
Gene Symbol
-
Assembly
GCA_963924575.1
Location
OZ004618.1:15150802-15156543[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.058 3.4 9.2 2.7 5 23 39 57 38 57 0.97
2 39 0.00021 0.012 16.9 0.5 3 23 62 83 61 83 0.96
3 39 0.00051 0.03 15.7 0.1 1 23 88 110 88 110 0.95
4 39 0.0025 0.15 13.5 4.3 3 23 118 138 116 138 0.93
5 39 0.054 3.2 9.3 6.2 1 23 144 167 144 167 0.98
6 39 0.004 0.23 12.9 0.2 1 23 272 295 272 295 0.95
7 39 0.0005 0.029 15.7 1.0 2 23 299 320 298 320 0.96
8 39 0.025 1.5 10.3 0.4 2 23 324 346 323 346 0.94
9 39 0.0035 0.21 13.0 0.4 1 23 351 373 351 373 0.96
10 39 0.0022 0.13 13.7 9.8 1 23 378 400 378 400 0.96
11 39 5.6e-05 0.0033 18.7 0.2 1 23 406 429 406 429 0.98
12 39 0.00013 0.0076 17.5 0.5 1 23 435 458 435 458 0.96
13 39 1.4 80 4.9 2.2 2 23 575 597 574 597 0.91
14 39 1.6 93 4.7 0.2 2 23 604 625 604 625 0.96
15 39 0.00047 0.027 15.8 0.1 2 23 659 681 658 681 0.95
16 39 0.0052 0.31 12.5 3.4 1 23 684 706 684 706 0.97
17 39 0.18 11 7.6 0.0 2 23 710 732 709 732 0.91
18 39 0.0013 0.073 14.4 0.2 1 23 737 759 737 759 0.95
19 39 0.00013 0.0077 17.5 6.0 3 23 766 786 764 786 0.95
20 39 0.00013 0.0075 17.6 1.7 1 23 792 815 792 815 0.98
21 39 0.00085 0.05 15.0 0.5 1 23 821 844 821 844 0.96
22 39 0.19 11 7.6 0.5 2 23 870 892 869 892 0.92
23 39 0.81 48 5.6 0.1 2 23 899 921 898 921 0.92
24 39 0.0056 0.33 12.4 2.3 1 23 927 949 927 949 0.97
25 39 0.012 0.71 11.3 0.1 2 23 955 977 954 977 0.91
26 39 0.003 0.18 13.2 0.7 1 20 980 999 980 1002 0.89
27 39 0.023 1.4 10.4 2.2 3 20 1007 1024 1005 1028 0.92
28 39 0.00063 0.037 15.4 0.3 1 23 1033 1055 1033 1055 0.96
29 39 6.3e-06 0.00037 21.7 1.7 3 23 1063 1083 1061 1083 0.96
30 39 6.6e-05 0.0039 18.5 2.4 1 23 1089 1112 1089 1112 0.96
31 39 0.0013 0.074 14.4 0.7 1 22 1118 1139 1118 1142 0.91
32 39 0.058 3.4 9.2 0.2 1 23 1179 1201 1179 1201 0.96
33 39 4.3 2.5e+02 3.3 0.6 4 23 1252 1272 1249 1272 0.90
34 39 0.0083 0.49 11.8 2.0 1 20 1272 1291 1272 1296 0.89
35 39 8e-05 0.0047 18.2 1.4 2 23 1301 1323 1301 1323 0.97
36 39 0.0002 0.012 16.9 0.8 3 23 1329 1349 1327 1349 0.96
37 39 6.1e-06 0.00036 21.7 1.1 3 23 1357 1377 1355 1377 0.96
38 39 1.8e-05 0.0011 20.2 0.3 1 23 1383 1406 1383 1406 0.96
39 39 0.00024 0.014 16.7 0.6 3 23 1414 1434 1412 1434 0.97

Sequence Information

Coding Sequence
ATGCAAGGACATGATCTTGGAATGTTATCGTGCCCAAATTCTGAAAACGCATTTAGTTCGCCAACAGAAATTGACAATCACAATTTAAGGGTGCACGAATATCAACAACGCAGAGACTGCCAGAGACATTTTAGAACTACTAGGGAATTAACTCAGCATTTGTCGACTCACGTCAAAAACGCTTGCAGAATTTGCCAAAAAGTGTACAGTACTGGTTCCAATTTGAGGAAGCATGTTCAGAGGGATCATGAAGGGGAGCGCTTTCTGTGCGAGGTTTGTGGCAAGGCTCTCACTGATAAGAAAGGTTACACGGATCATATGGCCACTCACAATGATGATAGACCGATTTGTTGTGAAATCTGCGGGAGATGTTTCAGGTTTTTGAAGCACCTCAAAGCTCATGCGGTAGTTCACACGAAAGAGAAACCATTCAAATGCAAATTGTGCTGCAGGAAGTTTACCCAACGTGGATCACTAACGACACATTTCAAAACGGTTCATGCTAAAGAAAGACCgatTTTGATAAGTGACGAAGAGGACAACTTCAACCCCTTGGAGCTAATCTGTTGCCTTTGCCACGCCCAATTCCCGTCCCTTGTAGATATCCGCCAACACGAGAAGGATTTTCACAAAATCCTGAAACCTGGCTGCTGTCCAGCCTGCGGCCTTGTCCCAGTAACCAAAAGAGAATTTATCGATCACCTAGAATCGCATTCTTCGCACAAGTTCTTCTATTGCAGAACGTGCAAAGTGTTTATCAGAACGCGGTCAATTTTCAATATTCACAGTTTGGCTCATGTCAGTAATGGGAGGTTTCCTTGTCCAGACTGCGACGAAACATTCATATGGGAGAAACTTCTGCAAAGACATTTTCGCGAGAAACATCTCTCGCTAACTTGCGAGATTTGCAACAAAACGTACAAAACTTACAAGGAATTATCAATTCATTCCAGGCTACACGTTGAGGTGTCCTGTAACTTGTGCGAGATGGTTTTCAAGAATGGTTGGCAGTTGAGGTCTCATGTACATGTTGACCACGAGGGACAGTTGTTTTTGTGCGAGATTTGCGGCAAGACTATGACCACTCTAAACGGGTACAAAGAACATATTAATACCCATGCCGGAAAGTCTCACTGTTGCGAATTCTGCGGCAAGTTCTTCAATACCTCTCAGCATCTGAAGAGACACTTTCGGGTCCACTCCAAGGAGAAGCCGTATAAATGCGAATTGTGCGACAAATCGTTCACGCAAAGCGGATCAGTAGGGCTTCATGTTAGAACGGTGCATAAAAAGGAGAGACCTTTTGCTTGCGAGATTTGTTCGAAACGTTTTGTTACTAGGGGCTTGCTGATGGCACATAAGAGGCAAACGCATAACGTTTCTAAATTAAATACAGTATTTCAAGGCCTTTTACCACCAAAATTTTTCAAGAAACGACGCCAAGCTTCCACTAATACCGAAGAGCAACCCACGATTAGAAAATGTCCGAAAACAAATGCAAATGAAGCAGTAGTAAACGGATATAGACGTCAGGAACCGCAGACATCTGAGGAGCAGCAGTTTCGTCAGACGTCCCTCCATCAGCTCAACCTTCCACTACCCGCCCCAGAAAACCTCCCGTCACAAATCATTGGACAATTACGAAGAAAATTTACGCAACAACGCCCCACGTTGCAGAAGATTTTGCAAGACGACAACGAGGATGTCAATCCTTTGGAGCTAATCTGCTGCCTTTGCCACGAACAATTCCCAACTCTTGCGAATATTCGCCAACACGAGAAGGATTTCCACGGAATTTTAACACCTCGCCGCTGTCCAGCTTGCCGTGTTACCTCGGCTTCAAAGAAAGATTTCATCGACCACCTAGAATCCCATCCTTCGCACAAGTTCTTCTATTGCAGAACTTGCAATGTCTTCATCAAAATGCGATCCACATTTAACACACACGGTTTGGCTCACGTCAGCGGGAGGCTCCCCTGTCCAGATTGCGACGAAACTTTTCCCTCCTTGAAGAACAGGGAAATACATATTCGCAACAGTCACACAATCCACAAGTGCGAAGTTTGCAGCAAAATATTCAAAAGTTTCAAAGACTTGTATATTCATACCAAGCTTCACGTCGAGGTACCTTGCAAATTGTGCGGAAAGGTTGTAGGGAACATGTGGAAGCTGAAGTCCCACGTGGCGCTTGACCATGAGGGGCGCCTTTTTTTGTGCGAGGTTTGCGGCAGGACTTTGACCACTTCGCAAGGATACAAGGAGCACATGCTGATCCATACCGGAAAGACGAAGTGTTGCGAATTCTGCGGTAAATTCTTCACTACCAAGGAACATCTAAAAAGGCACTACATAGTTCACACGAAGCAGAAACCGCATAAATGCGAAGTGTGCGAGAAGACCTTCACGGAAAGGAGCTCAGTACGTCTCCACGTTAGAACTGTGCACAAGAAAGAGAGACCTTTTAGCTGTGAGATTTGTTCGAAACGTTTTGTTACGAATGGCTTGGTGATGGCACATAAGAGACAGACTCATAAGTTTGTAGAAGAAACCGAACGAATTCCCTCAAACCATCCCAGCTACCTTACTTGGTACCAGCGTAACCATCTGACCTGCCTTCTTTGTCTGGAAAAATTTGCGACCCGTAGTCGCCTTCGCCAACACGAAAAGGACGTTCACGAAATTTTAGAGCCTTTACGCTGCCCACAATGCGGAGACATCTCCACACTCAAGGGCGATTTCAGAAAGCATCTCGAAGAGGCCCATTCCGAACGAAAATTCTTCTATTGCAGGGTCTGCGAGAAAAACATCAGAACCTGGTACACCCTCAACAGACACAAATCTCGTCACGGCAGCGGCAAGCTTCCTTGTCCGAAATGCGACGAGACCTTTATAACGAAACGTGCCATAGACAGGCACGTGGTTAAGGTCCACGATACCCACGAGTGCAAAGTTTGTGAGAAAGTGTTCAAAACTCGGGGGGAACTCCTGGGCCACGAGGGGTTCCACATTACAAGCTGTTGCAAGATCTGCCAGAAGGTTTTCAAGAGCAGACAAGTCCTGAGGAACCATGTCTGGAGGGACCACGAGAAGAGGGGTTATCTTTGTGAGATTTGCGGCAAGTTTTTGTCGAGTGTTTCCAGCTACAAAAACCACATTTTGATGCACGAGGGGAAAAAGGCGGTGTGCTGTGATGTTTGCGGCAAACGCTTTACTTCCAACAAATATCTCACGGTGCATTTAAGGGTGCACACGAAGGAGAAGCCGTACAGTTGCAAGATTTGTAAGAAAAGTTTCTCGCAGCATGGAACACTGTCTCTTCACATAAAGGGGTCTCATGGGGACAAGAGACCGTATGCTTGCGGACTTTGTCCCAAAAGTTTCATTGCGAAAACTATGCTGAAGACGCACATGAAATATTACTATCACGAATACTCTAATGAAAACAATTCCACAGCCGGATATAACGGTTATTACAATTACTATAATTACGAAACCTCGTGGTACAGCAGCGGCAGCTATCCACCAGTTCAAAATTTTCCATGCACGTTCTGCTCTGCaatcttttcaaattttgaactcCTCGTCCAACACGAAAACCTACATCAAGCTTCTGCTGAAACCAAAACAAACCACCACGTTGAATCGATTTTAAAAGAACGACAATTTTATTGCAACGTTTgtgagaaatctttaaaaaaccTGCAGCAACACCACAGACATAAAAAGAATCACGGCGAGGGCAAGCATCTCTGCATCTATTGTCAAAAAGAATTTCTGTCAAAGACAAAACTGAACGGTCACATCTCCAGAAACCACAACTGCAGTATTTGCTCCAAGTTTTTCGCAGACACGAATCAGTTAAGGAAACACAAAGTCAAGGAGGGGCACGAAAAGAAGAGAAAGTGCACTTATTGCGTCAAGAAGTTTACCACCGCAGCCTCCTTGAGGGAGCACTATCGTAAGGAACATCGTGTAAATCATTTGTGCGAGGTTTGTGGCAAAGTTTTGTCTTCTCTGTCGAGCTTTAAAGACCACATGTTGATGCACTCTGGAGAGAAAGCGATCTGTTGTGAGATTTGTGGAAAAGGATTTTCCACTGGAAAATATTTGACGGTGCACATGAGGACGCACACAGGGGAAAAGCCGTTTTCCTGCAAGTCGTGCGATAAAAGCTTCACTCAAGCTGGGTCTTTGTCTCTTCATATAAGGGCTGTTCACACTGGAGAGAAACCCTACGGTTGCGATATAtgcccaaaaaaatttatttcgaaGACGCTGTTAAATTCTCACAAGAAGATTCACTCCAAGGAAATTTAG
Protein Sequence
MQGHDLGMLSCPNSENAFSSPTEIDNHNLRVHEYQQRRDCQRHFRTTRELTQHLSTHVKNACRICQKVYSTGSNLRKHVQRDHEGERFLCEVCGKALTDKKGYTDHMATHNDDRPICCEICGRCFRFLKHLKAHAVVHTKEKPFKCKLCCRKFTQRGSLTTHFKTVHAKERPILISDEEDNFNPLELICCLCHAQFPSLVDIRQHEKDFHKILKPGCCPACGLVPVTKREFIDHLESHSSHKFFYCRTCKVFIRTRSIFNIHSLAHVSNGRFPCPDCDETFIWEKLLQRHFREKHLSLTCEICNKTYKTYKELSIHSRLHVEVSCNLCEMVFKNGWQLRSHVHVDHEGQLFLCEICGKTMTTLNGYKEHINTHAGKSHCCEFCGKFFNTSQHLKRHFRVHSKEKPYKCELCDKSFTQSGSVGLHVRTVHKKERPFACEICSKRFVTRGLLMAHKRQTHNVSKLNTVFQGLLPPKFFKKRRQASTNTEEQPTIRKCPKTNANEAVVNGYRRQEPQTSEEQQFRQTSLHQLNLPLPAPENLPSQIIGQLRRKFTQQRPTLQKILQDDNEDVNPLELICCLCHEQFPTLANIRQHEKDFHGILTPRRCPACRVTSASKKDFIDHLESHPSHKFFYCRTCNVFIKMRSTFNTHGLAHVSGRLPCPDCDETFPSLKNREIHIRNSHTIHKCEVCSKIFKSFKDLYIHTKLHVEVPCKLCGKVVGNMWKLKSHVALDHEGRLFLCEVCGRTLTTSQGYKEHMLIHTGKTKCCEFCGKFFTTKEHLKRHYIVHTKQKPHKCEVCEKTFTERSSVRLHVRTVHKKERPFSCEICSKRFVTNGLVMAHKRQTHKFVEETERIPSNHPSYLTWYQRNHLTCLLCLEKFATRSRLRQHEKDVHEILEPLRCPQCGDISTLKGDFRKHLEEAHSERKFFYCRVCEKNIRTWYTLNRHKSRHGSGKLPCPKCDETFITKRAIDRHVVKVHDTHECKVCEKVFKTRGELLGHEGFHITSCCKICQKVFKSRQVLRNHVWRDHEKRGYLCEICGKFLSSVSSYKNHILMHEGKKAVCCDVCGKRFTSNKYLTVHLRVHTKEKPYSCKICKKSFSQHGTLSLHIKGSHGDKRPYACGLCPKSFIAKTMLKTHMKYYYHEYSNENNSTAGYNGYYNYYNYETSWYSSGSYPPVQNFPCTFCSAIFSNFELLVQHENLHQASAETKTNHHVESILKERQFYCNVCEKSLKNLQQHHRHKKNHGEGKHLCIYCQKEFLSKTKLNGHISRNHNCSICSKFFADTNQLRKHKVKEGHEKKRKCTYCVKKFTTAASLREHYRKEHRVNHLCEVCGKVLSSLSSFKDHMLMHSGEKAICCEICGKGFSTGKYLTVHMRTHTGEKPFSCKSCDKSFTQAGSLSLHIRAVHTGEKPYGCDICPKKFISKTLLNSHKKIHSKEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-