Pful008699.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- B0310.2_1
- Assembly
- GCA_963924575.1
- Location
- OZ004618.1:15206583-15212393[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 42 0.0012 0.07 14.5 2.1 1 23 45 68 45 68 0.97 2 42 0.0014 0.081 14.3 0.6 1 23 73 96 73 96 0.93 3 42 1.9 1.1e+02 4.5 1.0 1 23 131 154 131 154 0.92 4 42 0.09 5.3 8.6 4.4 1 23 159 181 159 181 0.98 5 42 1.6e-06 9.4e-05 23.5 0.5 1 23 219 241 219 241 0.98 6 42 8.5e-05 0.005 18.1 0.3 1 23 247 269 247 269 0.98 7 42 1.1e-07 6.7e-06 27.1 2.0 1 23 275 297 275 297 0.99 8 42 0.00051 0.03 15.7 1.8 1 23 310 332 310 332 0.98 9 42 0.38 22 6.6 1.0 2 23 338 360 337 360 0.95 10 42 0.0034 0.2 13.1 4.5 1 23 366 388 366 388 0.97 11 42 0.0013 0.074 14.4 0.3 1 23 394 417 394 417 0.98 12 42 0.0002 0.012 16.9 4.6 3 23 424 444 422 444 0.96 13 42 0.079 4.6 8.8 0.9 2 23 453 474 452 474 0.97 14 42 0.027 1.6 10.2 0.1 2 23 483 503 482 503 0.96 15 42 0.0002 0.012 17.0 1.1 1 23 509 531 509 531 0.99 16 42 4.6e-06 0.00027 22.1 0.3 1 23 537 559 537 559 0.98 17 42 0.77 45 5.7 0.2 2 14 588 600 587 608 0.77 18 42 8.3e-05 0.0049 18.1 0.8 1 23 659 681 659 681 0.98 19 42 1.4e-05 0.00084 20.5 1.6 2 23 689 710 688 710 0.97 20 42 0.0013 0.074 14.4 2.3 1 23 716 738 716 738 0.97 21 42 3.9e-06 0.00023 22.3 0.3 2 23 746 767 745 767 0.97 22 42 0.00082 0.048 15.0 0.5 1 23 774 796 774 796 0.98 23 42 5.5e-05 0.0032 18.7 3.2 1 23 802 824 802 824 0.98 24 42 0.00091 0.053 14.9 0.1 1 23 830 852 830 852 0.97 25 42 0.00025 0.015 16.6 0.4 1 21 858 878 858 879 0.93 26 42 0.003 0.18 13.2 1.4 1 20 881 900 881 902 0.95 27 42 0.052 3 9.3 2.0 3 23 910 930 908 930 0.97 28 42 0.073 4.2 8.9 0.6 1 20 1019 1038 1019 1040 0.94 29 42 0.084 4.9 8.7 0.4 3 23 1048 1069 1047 1069 0.92 30 42 0.017 1 10.9 1.6 3 23 1075 1095 1074 1095 0.97 31 42 0.013 0.75 11.3 4.5 1 23 1101 1124 1101 1124 0.96 32 42 9.7e-07 5.7e-05 24.2 1.2 1 23 1129 1151 1129 1151 0.98 33 42 0.32 19 6.9 8.9 1 23 1256 1278 1256 1278 0.97 34 42 0.0043 0.25 12.7 1.7 1 23 1284 1306 1284 1306 0.97 35 42 0.00011 0.0062 17.8 5.6 1 23 1311 1333 1311 1333 0.99 36 42 0.01 0.58 11.6 0.7 2 23 1340 1362 1340 1362 0.93 37 42 0.11 6.2 8.4 0.2 3 23 1369 1389 1367 1389 0.95 38 42 0.00095 0.056 14.8 0.6 1 23 1399 1421 1399 1421 0.97 39 42 0.0017 0.1 14.0 0.6 1 23 1427 1449 1427 1449 0.97 40 42 6e-06 0.00035 21.7 0.7 1 23 1455 1477 1455 1477 0.97 41 42 2.1e-06 0.00012 23.2 3.9 1 23 1483 1505 1483 1505 0.97 42 42 0.00026 0.015 16.6 2.7 5 23 1514 1532 1511 1532 0.95
Sequence Information
- Coding Sequence
- ATGTTTCTGGTAGTAAAGGAATTGGCTATGCCGAAGCCGTCACAATTTTTCCGTGCCCCCCATCAAATCTACCATGCTAAAATGTACGGCTATTGCTTGATTTCGTTTTATTTTAGGTCGACCGATTTAATTTATTTCTGCAACGGCTGCAACAAATTCTACGCCAGTCTAAGAAATTACAAAGCCCACAGGAAGGTCTACCATAACGTTCTCAGATATTTCTGCGGCACCTGCGGGAAGGGCTTCACCATCGAATCGCTCTTAAAGAAACACGTCTCGCAGACTCACGAGAAAGAGCATCGATTCATCTGCGAGTTTTGCAATCACGCCTGCTTGACCGTCACCATATTGAGGAATCACGTGATAAGAAGCCACACCAAGGACTTCCCTTACAAATGCGATCTCTGCGAGTTCGGCACGTTCACCACGAAGAAGTTGCAGCAGCATAAAGTCGTGGTTCACGAAGGTAAACGATTTGTCTGCGAGGTCTGCAAGAAGATCTACCGGTGCCCCAAACATTTCAAAATCCACCAGGCCACTCATGATTCGAACTATGTACGGACCGAGATCGTGTGTGAGATTTGTTCGAAGATCATCTACAGTCACACGGGTTATAAGTTTCATATGAATTTGCACAAGGGAACGAGTATGAAGTATGTTTGCGATGTTTGTGGGAAGAGTTTTACTTCTACGAGCAGTTTATCGGCACATAAACGACTTCACTCGGGGGAGAAACCATTCCCTTGTAGGTTTTGTGGCAAGGCTTTTTCGAGAGGGGTGAATTTGAGGCTGCACGAGCGGATCCATACAAAGGAGAAGCCTTATCAGTGCACGCTTTGCCAGAAGAGGTTTAGCCAAAAGTCTTCTTTGAATGTTCACATGAGGGTGCATACGGGGGAAAGGCCTTACAAGTTTTCCGAAGAGGTTTTCCCTTGCCCCGACTGCCCCCGACTCTGTCCCTCAAAGTCGAAACTCCGCACACACAGGAAATCCCACAAAGAAAAGGGCCTCCCCTGCCCTCTCTGCTTCAAACTTTATAAATACCAGCATCAAATTGACGTCCACATTCGCCAGTTCCACGAGAATAGGAGACCATTTGAGTGCACTCTTTGCGAAAAGTCCTTCAAAACCAGACAGAACCTCACGTGCCACACCATAACACACACGCGTCAGTATTTGTTCAAGTGCGAAATCTGTGAAATGGGTTTTACTTTTAAAGCCCAAGTCAGTCAGCACATGGACACGGAGCACCGAGGAGTACGCCATCTCTGCGAATTCTGCAATAAAGAATTCAAGAACTTGTACAGTTTGAAGAAGCACATCAAGAAGCACAAGGAGGGGCACTCCGAGGCTCAAACGTGCGAAATTTGCTCCAAAGTGATTTTGAACAAGAGAAATTTTAAGATTCACATGGAAAAGCATTCCGGAGAGAATGTTAATACTACTGTTTGCGATATTTGTGGCAAGGTTCTAGCTAAGGATGGTTTGAAACTTCACATGATGAGCCACTCGGGGGAGAAGCCGTTTAagtgtgaattttgcaaaaagggCTTTTCCGTTAATAGGCTGCTGATCGAGCATAGGAGGATCCATACCAAGGAAAAGCCTTTCGTGTGCAGTACTTGTGGAAAGGGCTTCACGCAGAAAGGGGCTTTGAATATTCACGTGAGATATCATACTGGAGAGAGGCCGTTCAAGTGTGAGAAgaACTATTACTTCTCCTTTAAAGAAGCTGCATCTAATGGCCCAGGTATTATCATCTCATGTGCAACCTGCAACAAGAGATTTAAAACAGAAAGCATGATACTGCACGCAGCGACCCACGCGAAAGATTTTCATTTTGACTGCGAGTCATGTTCGAGGGACCACACCACGAAATCGGCATTCCAAACAGTCAAAAATTCTGAGCATGAAAATGGACTATACATCCGTGAGAACAAACAAGAAATCTCCACCTCTGAAAGACAGTCAGTCTATGAATGCGAGCTTTGCTCCAAGCTTTTCTCTTCCAAGAAATCTCTCAAGAGCCATATAGAGGTTCACAATGGCGTTCAAGAAAAACTCGTTTGCGAAATTTGTGGAAAATGCTACGAAAAGAACTATCTTCTCAATAACCACCAGAGGAGCCACGATGAGGAACGTCCTTTCGTCTGTGAAACTTGTGGAAAGCGCTTCACCTATTTGAAGCATTTAATTCCACATCGAAACAGTCACGACGAAAGCAACCAGTCTTCGGTCTGTGTTACTTGTGGTAAAGTCTTTTCTTCCAATAGATACCTGGAGGCCCACATCAGGAGACACTTGGGAAATATGCGGAAGTACGAGTGCGAAGTTTGTAGTAAACAATATTCTTCCGTGACTTTCCTGAGGGAGCATATGAACATCCACCTGGGCCTTCGGCCTTACGAATGTGAACACTGTGATAAAAAATTCACTATGAAGAAATATTTGGTGGAGCACACCAGGATTCATACGAAGGAGAAACCTTACATCTGTATGATCTGCGCTAAGGGTTTTGCGTTGAAATATACGCTTACTGTTCATATGCGGGGGCATACTGGCGAGAGGCCTTATGCCTGTGAGTTTTGCCCTCGGAAGTTCCCTTCTAGCAGTAATTTAAGGAGTCACAGATCTTCGAAATATTCCTGCAACATTTGTTCAGAGATATTTTCAAACCGAGACGATTTTCTAAAGCACCATATACACCAATATGGCGAAACTTTCGGTTGTTGCAAATGTGGAAATCGATTCAAAACTATTTCTGCCCTTTACTCTCACTTGGAGTCTCACAAAACCGAGGAAGAGGTAGCTGTTGATAACTTGGAGCTCTTGTACATTCTAGAAGACCAGCAGTGTATCAACGAGGTCGTTATCGAAGAGCAAGTAGTAGAAGAACCTATTTCTGATTTGGTACAACAGGAGCATGGGTATTTCAAGCGAGATAAATCCGAGAAAGAAATTAAACCGCGAGCACCGGTTAAGCGTCGTAATGTAGATTTTTCCACCACTAGTTTTCTCTACCTTGAGCCCACTTCTGATGTCGAGGTTCCGCACTACAAGTGTTTGAAGTGCGAGCAGATTTTCATCAGTAAATTCGGTTTCTCTCGTCACGTGGAGAAGGGGAAGTGTTTCATAAACAGTTGTGATGCTTGCCCCCTCAGCTTTAAGAAAAACAGCGATTTCTATTCCCACTATATTAATGATCACGCTGACAGGGCCATCTGCAATTTTTGCTTCAAAACTTTCATGTACGAGAAGAATGTCAAGGAGCATATGTTGAGGCACTTGGATCAGTTTAGACATAAATGCAACGGCTGCAATAAAGGATTCTACACTGTTCGAGAGTATCGTAATCACTACAAGAATCGACATATGGGAATTCGGCACAAGTGTCCTATTTGCGGCAGGAGCTTTGCTGATGAATACTATTTTAAGCGGCATATAGCCACTCATGAACAGGCAGGtttatACCAAGAGCATCATTATACCACGAATTATATGGACCTCCCAAGCCCTCAAGCCGAAAATTTGCAGCTGCAATGCAAATACTTAATGTCAATGGTTGATCCTAAAGCACAAATGCCAGATAATATTCTAGACTCAGATACTGATCTCATTAATCTTCTAACAGCAGAAGATGACTGTTCAGATATTTTGAGTAACATCGCCACTAATGAACAATTCGAAAGTTTAATCAACAGCAGTACAAACTTCGTGGAAGAGCTTATCAGCGAGATGAAAAGCGAGCCTCAGAAAGTTGACACTTTTAGGTGCTATCACTGCTGtaaagaattcaaatccaagAAACTTCTAAGAAAGCATCTTTTTATCCACACAGGGATTAAAAAGTTCGCCTGTGAGATTTGTTCCAAGGCATTCAAGTATCGCTGCGAAGTAGAAGCTCACAAGAAAAGTCACAATAACCCCACATTCCAATGCGAGATTTGCTCGAAAATGTTTATTCACAAATCACATCTCGACCTCCACAGACGCAAACATTTAAATGAATTCGTTGCTACTTGCAAGCAGTGTAATGAAGGATTCGTTagtaaattttcctacaaaACTCATATAGACCTTGTTCATAAGAAGCTGCAGTTGATTTGCGATGCTTGCGGGGCAAAGCTAAGCACAATGTCGTCACTTAAAGAACATAAGTTGACTCACGATCCGAATTATAAGAAAGAAAGAGCGCATGTTTGCGAAATCTGCGGGAAATCTTACCTGACGGTTAGAAACTTAAGGGGGCATATGAAGATCCACCAGTTAGCCAAGGCTCACGTTTGTGATATCTGCGGCAAGTCGGTCAGTAGCAAAAAGATCCTGGAGACTCACGTCAAGATGCACACTGGTCTTAAAGATTTCTTTTGCAATATTTGTGATAAAGCCTTCGCTTCTAAGGAGTATCTTGAGGTTCACTTTAGGACCCACACTGGGAATAAGCCCTTTTGCTGTGAAGTTTGCGGGAAGAGGTTTACGCAGAAGACGTCTCTTACCGTTCACATGAGGTACCATACTGGCGAGAGGCCGTATAAGTGTGAATGCGGTAAGGAGTTCACCACGAAGAGTCATTTGATGACACATTACAAGGTTCACGATGTTGGAGGGGTCGATATTGATTATATTTCTCGACCGTTGATGTAA
- Protein Sequence
- MFLVVKELAMPKPSQFFRAPHQIYHAKMYGYCLISFYFRSTDLIYFCNGCNKFYASLRNYKAHRKVYHNVLRYFCGTCGKGFTIESLLKKHVSQTHEKEHRFICEFCNHACLTVTILRNHVIRSHTKDFPYKCDLCEFGTFTTKKLQQHKVVVHEGKRFVCEVCKKIYRCPKHFKIHQATHDSNYVRTEIVCEICSKIIYSHTGYKFHMNLHKGTSMKYVCDVCGKSFTSTSSLSAHKRLHSGEKPFPCRFCGKAFSRGVNLRLHERIHTKEKPYQCTLCQKRFSQKSSLNVHMRVHTGERPYKFSEEVFPCPDCPRLCPSKSKLRTHRKSHKEKGLPCPLCFKLYKYQHQIDVHIRQFHENRRPFECTLCEKSFKTRQNLTCHTITHTRQYLFKCEICEMGFTFKAQVSQHMDTEHRGVRHLCEFCNKEFKNLYSLKKHIKKHKEGHSEAQTCEICSKVILNKRNFKIHMEKHSGENVNTTVCDICGKVLAKDGLKLHMMSHSGEKPFKCEFCKKGFSVNRLLIEHRRIHTKEKPFVCSTCGKGFTQKGALNIHVRYHTGERPFKCEKNYYFSFKEAASNGPGIIISCATCNKRFKTESMILHAATHAKDFHFDCESCSRDHTTKSAFQTVKNSEHENGLYIRENKQEISTSERQSVYECELCSKLFSSKKSLKSHIEVHNGVQEKLVCEICGKCYEKNYLLNNHQRSHDEERPFVCETCGKRFTYLKHLIPHRNSHDESNQSSVCVTCGKVFSSNRYLEAHIRRHLGNMRKYECEVCSKQYSSVTFLREHMNIHLGLRPYECEHCDKKFTMKKYLVEHTRIHTKEKPYICMICAKGFALKYTLTVHMRGHTGERPYACEFCPRKFPSSSNLRSHRSSKYSCNICSEIFSNRDDFLKHHIHQYGETFGCCKCGNRFKTISALYSHLESHKTEEEVAVDNLELLYILEDQQCINEVVIEEQVVEEPISDLVQQEHGYFKRDKSEKEIKPRAPVKRRNVDFSTTSFLYLEPTSDVEVPHYKCLKCEQIFISKFGFSRHVEKGKCFINSCDACPLSFKKNSDFYSHYINDHADRAICNFCFKTFMYEKNVKEHMLRHLDQFRHKCNGCNKGFYTVREYRNHYKNRHMGIRHKCPICGRSFADEYYFKRHIATHEQAGLYQEHHYTTNYMDLPSPQAENLQLQCKYLMSMVDPKAQMPDNILDSDTDLINLLTAEDDCSDILSNIATNEQFESLINSSTNFVEELISEMKSEPQKVDTFRCYHCCKEFKSKKLLRKHLFIHTGIKKFACEICSKAFKYRCEVEAHKKSHNNPTFQCEICSKMFIHKSHLDLHRRKHLNEFVATCKQCNEGFVSKFSYKTHIDLVHKKLQLICDACGAKLSTMSSLKEHKLTHDPNYKKERAHVCEICGKSYLTVRNLRGHMKIHQLAKAHVCDICGKSVSSKKILETHVKMHTGLKDFFCNICDKAFASKEYLEVHFRTHTGNKPFCCEVCGKRFTQKTSLTVHMRYHTGERPYKCECGKEFTTKSHLMTHYKVHDVGGVDIDYISRPLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -