Pful008701.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pycnomerus fuliginosus
Gene Symbol
-
Assembly
GCA_963924575.1
Location
OZ004618.1:15213860-15222160[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.24 14 7.2 2.5 3 23 19 40 18 40 0.92
2 39 0.043 2.5 9.6 2.7 1 23 45 67 45 67 0.96
3 39 0.00063 0.037 15.4 3.6 1 23 101 123 101 123 0.95
4 39 0.0027 0.16 13.4 0.6 1 23 128 150 128 150 0.98
5 39 0.00027 0.016 16.5 0.5 1 23 159 182 159 182 0.97
6 39 0.00046 0.027 15.8 0.3 3 23 189 209 187 209 0.96
7 39 0.11 6.5 8.3 5.3 1 23 215 237 215 237 0.97
8 39 7.8e-05 0.0046 18.2 1.3 1 23 243 266 243 266 0.96
9 39 9.6e-06 0.00056 21.1 0.8 1 23 313 335 313 335 0.95
10 39 0.0011 0.063 14.7 3.9 1 23 344 366 344 366 0.98
11 39 2.2e-05 0.0013 20.0 1.6 1 23 375 398 375 398 0.97
12 39 0.38 22 6.6 0.9 1 23 403 425 403 425 0.96
13 39 2e-06 0.00012 23.2 0.9 1 23 431 453 431 453 0.99
14 39 0.00033 0.019 16.3 3.4 1 23 459 482 459 482 0.96
15 39 0.00034 0.02 16.2 3.7 1 23 487 509 487 509 0.97
16 39 0.0001 0.006 17.8 0.9 1 23 515 537 515 537 0.97
17 39 0.0045 0.26 12.7 4.6 1 23 576 598 576 598 0.97
18 39 4.5e-05 0.0026 19.0 2.4 1 23 606 628 606 628 0.99
19 39 0.0044 0.26 12.7 5.4 1 23 637 659 637 660 0.96
20 39 0.00074 0.044 15.1 1.3 1 23 667 689 667 689 0.97
21 39 8.9e-06 0.00052 21.2 3.7 1 23 695 717 695 717 0.97
22 39 0.00014 0.0083 17.4 1.7 1 23 723 746 723 746 0.94
23 39 0.00019 0.011 17.0 2.3 1 23 751 773 751 773 0.97
24 39 1.5e-05 0.00088 20.5 0.8 1 23 779 801 779 801 0.98
25 39 7.2e-05 0.0042 18.3 0.8 1 23 807 830 807 830 0.95
26 39 3.6e-05 0.0021 19.3 0.9 1 23 836 858 836 858 0.96
27 39 0.31 18 6.9 1.3 3 23 878 899 877 899 0.96
28 39 3.7e-05 0.0022 19.2 0.4 2 23 905 926 904 926 0.96
29 39 0.0037 0.22 13.0 2.8 1 22 932 953 932 953 0.97
30 39 0.00097 0.057 14.8 2.2 2 23 961 982 960 982 0.96
31 39 0.0011 0.063 14.6 2.5 1 23 987 1009 987 1009 0.98
32 39 2e-05 0.0012 20.1 2.8 1 23 1018 1040 1018 1041 0.96
33 39 0.00047 0.027 15.8 0.3 1 23 1048 1070 1048 1070 0.98
34 39 1.9e-06 0.00011 23.3 2.9 1 23 1076 1098 1076 1098 0.99
35 39 5.1e-05 0.003 18.8 5.2 1 23 1104 1127 1104 1127 0.95
36 39 0.035 2 9.9 1.2 3 23 1134 1154 1132 1154 0.96
37 39 3.7e-05 0.0022 19.2 2.9 1 23 1160 1182 1160 1182 0.97
38 39 0.0014 0.08 14.3 0.5 1 23 1188 1211 1188 1211 0.96
39 39 3.5e-05 0.002 19.3 0.8 1 23 1217 1239 1217 1239 0.98

Sequence Information

Coding Sequence
ATGTATAATTTTTCCAGATCCACTggtaaaaataatcaaagacgaAGTACTCTTTGCACAATATGTCTTAGAGATTTCGACACATACCAACAGCTCAAGAAGCACCGCTTTCATGCCCATACTCCTGAAAGGTTCGCTTGTGAATTTTGCGACAAAAAATTCAAGGAACTCTGCAGATTAAGATACCACATTGACGTCCACTCCGATGAGAAACGATACCATTGTCAAACCTGCGACGCTTACCAGCAAACTTACCAGCAATTTATATGTCATAAGAGAGTTCATGAAAACCCCAATGGTTACACGTGTGATGATTGCGGCAAAAATTTTCGAAGCAGACAGTGCTTCAACGAGCATTTAGCATTTCATAAGGGTGTAACGTACCCCTGCCCGGAATGTATACAATCGTTTAATAGTAAATTTAAACTCGCTGTTCACAAAAAGACCCATTGCGATGAAGACAAGGATACGAAGTTCTCTTGCGGGATTTGCGACAAACCTTTTTTGAGCAATAACAGTCTTAGGAAACATGTGCGAAAGGCCCATATCGGTGAGAAGCATTTATGTGAAGTTTGTGGCAAGTCGATGACTTCTGCAGCGAGTTTAAGAGATCATATGAACATACATTCTGGGGATAAACCCTTCACTTGCCATTACTGTGCCAAGAGCTTTTGTAAGAAGCAGATTTTGATTTCTCACTTAACAGTTCACACTAAAGAACGCCCACATGCTTGCCCTTTCTGCGATAAGAGGTATTCGCAAAGAACTCCACTAACTAATCATATTAGGAGTGTGCATAAAAATGACAAGCCTCATGCTTGCTTAGCTTGTAATAAGAGCTTTCTCCTTGGGCTAAACCCAAAATTCAAGCAGTGTCTTTTCAGATTAAACGAGAAAGATCCTGATAAAAGCATTTCCGAAACTGAAGACTGCCAGTTTCTTTGTGATGAATGCGACAAAAGTTTTGCCAGTCGTAAACTACTGAACGCCCACAGGAGGAACCACAGAAGGAAAAGATTGGTTAAGGCGTTCACGTGTAAAATTTGTAAGGCTACGTTCAAGTACAATTACACTTTAAAACTACATTCAAAGAGACACGACCAGGGTTACGTGTCCCACCAGTTCGAGTGCCCTCACTGCGAAAAGAGCTTCACAGCTAAGCAAACCTTACAAATTCACATCCAGTCTCGCCACGAGGGAGTGAAGTACAATTGTCGGTTTTGCGATAGGGCTCTATCCACGAAGGACATTTTAAAAGAGCACGAGTTTACTCATACTCGGCAAAAGCCCTTTCAGTGCTCCTTGTGTGATAGAGGGTTCACTAGGAATAAGTTGCTGAAGGACCATATACGAGTTCACAATAATGAAACTCCCTTTGTCTGCAGCATTTGTAATAAATCCTTCTCTTCGAAGAGATGCATGAATTCGCATGTTAAGAATATTCATGAGGGGAACCGGCATATGTGCGAGACATGTGGGAAGTGTTTGAGCTCATCGGAAAGTTTGAAGATTCATAAGAGGATACACACTGGGGAGAAGCCTTACGTTTGCAGCTACTGCGGGAAGGCCTTTGCGAAGAAGCAGCATATGGAAGTGCATTTTATTGTACACACGAAGGACAAGCCACACGTTTGTAAATTCTGTGGGAAGAAaTGTCTTCGTACAAAGAGTCTAGAGGACGTAAAGATTTCAAACAGCGAGGATTTGTTAGATTTCCCCCAAGATCACATGTGCGATGTTTGCTACAAATGTTTCGCAACTGCTAGAATGTTGACACTTCATAAAAGAAACCACAGAAAAAAGCGCACAGGGACATACACGTGCGAAACCTGTGGCAAAGTATTCAAGTTTCGATATAGACTAACAGACCACAAACGAATACACGAAGACGGCTACGCCCGGAAGACTTTCTCTTGCACCATCTGCGAGAGAACCTTCGGTTCCTGTCAGGCTTTCCAAAATCATACCAGAATGCACCACGAAGGCGTTGACTCGCCATTTGTCTGCAGTTTCTGTGGTAGGAAATTATCGAGCAGCAAGAGTTTAAGGGACCACCAATACATCCATACTGGGGAAAAGCCGTTTGCTTGCACCTTCTGCGACAAAACCTTTCGAAAAAAGGAGCATTTAACCGATCATTTAAGAATCCACAATAATGAAATGCCCCATGTTTGCGGAGTGTGTAAAAAGGCTTTCACGAATAGAAAAGCGCTCACACGACACAGCCAAATTTACCACGAGGGGAAAAAGCACATGTGCGACACTTGTGGGAAATGTCTGTCGTCTGGCGAAAGCTTGAAGGTTCATATGAGGATCCACACTGGAGAGAAACCATATGTTTGCAGTTATTGCGGCAAGGCGTTTGCCAAGAAGCAACATATGACTGTTCATTTGATCGTTCACACCAAGGACAAGCCTCATGTTTGTAAATTCTGCGGAAAGAGCTACACTCAAGGGAGTTCACTGACGATACATGTCAGGGCTGTTCACACTAAGCAGACGCCTTTCATTTGTAGCATTTGCTCGAAGAGTTTCGTGACCAGGAGTTTACTTAATGTTCATTTCAAGCTGCACCGCGTATCTCTTCGTATAAAGCAAGAAGATGCGTCAATCAAGAAGGGCCAAAACTTGTGTAAGATATGCAAGATCACATTCCTCGAATACAAAAACTTGCGGCAGCATCGCAAGCAGGTGCACGTGGCCAAATCCCTTCCTTGTTCAACATGCGGAAGGATGTTCAAAGACAATTGGACGCTAAAGAAACACGCCGAAACTCATTCCACTGAAGATAAATATTCCTGTGATGAGTGCGAGATGAAATTCCGGACATACCAGCAGCTGTGCGAGCATCGTAGGACTAAAAAAGCCAAGGCGCCGTTGATTTGCTCTTATTGTTCCAAGGTCTTTGCCTCGAGGTCCTCGTATGGCAAACATCTGAAGCACCATTTGGGGATTAGGCATACTTGTGATATATGCCAAAAGACTTTCGGCGATGTGAGCACGATGAGGGCCCACAAGAAGAAGCACGATGAGAATTTTGTCCAGCCGATCTACCAATGCAATCTCTGCGAGAAGAGCTACTCGGTTGAATATAATTTAAAGACTCACATCCAGAGGCACCATGGTGGTGACTGCCCAGTCTATGTTTGTGAGACTTGCGGACGAGGGATGTCTTCTAGGAAGAGTCTGAGAGATCATATGATGATTCACAACGACGAAAGGCCGTACGAGTGTGAAACTTGCAGTAAAAGCTTCAGAAAGAAGGAACATTTAATCGATCATATCAGAACGCACACTAAAGATAAGCCTCATAGTTGTGAGTTTTGCGGACGAACTTTTACAACGAGAAAAAACTTGAGGACTCATATCCACGTTTCTCACGAAGGCAAAAGGCATCTTTGTGAGATTTGTGGGAAGGAAATGGCATCAGTGACTAGCCTAAAGAATCACAAGAAAACCCACACTGGGGAGAAGCCCTTTGCTTGTTCTTTTTGTGGCAAAAGGTTTACGAAGAAGTATCATTTGTCCGTTCATGTTAACGTTCATACCAAAGAAAAACCTTACGCTTGCAAGTTTTGTGATAAGAAGTACACGCAAGGGACTTCTTTGAGCTTGCATATTCGAGCGGTTCACAGCAAGGAGAGACCTTATGTTTGCGATATCTGCAACAGAGGGTTTATCACAAAAACTTTGCTTACGATGCATCGCAAGTCTCACTGGACTAAAGACATTTAA
Protein Sequence
MYNFSRSTGKNNQRRSTLCTICLRDFDTYQQLKKHRFHAHTPERFACEFCDKKFKELCRLRYHIDVHSDEKRYHCQTCDAYQQTYQQFICHKRVHENPNGYTCDDCGKNFRSRQCFNEHLAFHKGVTYPCPECIQSFNSKFKLAVHKKTHCDEDKDTKFSCGICDKPFLSNNSLRKHVRKAHIGEKHLCEVCGKSMTSAASLRDHMNIHSGDKPFTCHYCAKSFCKKQILISHLTVHTKERPHACPFCDKRYSQRTPLTNHIRSVHKNDKPHACLACNKSFLLGLNPKFKQCLFRLNEKDPDKSISETEDCQFLCDECDKSFASRKLLNAHRRNHRRKRLVKAFTCKICKATFKYNYTLKLHSKRHDQGYVSHQFECPHCEKSFTAKQTLQIHIQSRHEGVKYNCRFCDRALSTKDILKEHEFTHTRQKPFQCSLCDRGFTRNKLLKDHIRVHNNETPFVCSICNKSFSSKRCMNSHVKNIHEGNRHMCETCGKCLSSSESLKIHKRIHTGEKPYVCSYCGKAFAKKQHMEVHFIVHTKDKPHVCKFCGKKCLRTKSLEDVKISNSEDLLDFPQDHMCDVCYKCFATARMLTLHKRNHRKKRTGTYTCETCGKVFKFRYRLTDHKRIHEDGYARKTFSCTICERTFGSCQAFQNHTRMHHEGVDSPFVCSFCGRKLSSSKSLRDHQYIHTGEKPFACTFCDKTFRKKEHLTDHLRIHNNEMPHVCGVCKKAFTNRKALTRHSQIYHEGKKHMCDTCGKCLSSGESLKVHMRIHTGEKPYVCSYCGKAFAKKQHMTVHLIVHTKDKPHVCKFCGKSYTQGSSLTIHVRAVHTKQTPFICSICSKSFVTRSLLNVHFKLHRVSLRIKQEDASIKKGQNLCKICKITFLEYKNLRQHRKQVHVAKSLPCSTCGRMFKDNWTLKKHAETHSTEDKYSCDECEMKFRTYQQLCEHRRTKKAKAPLICSYCSKVFASRSSYGKHLKHHLGIRHTCDICQKTFGDVSTMRAHKKKHDENFVQPIYQCNLCEKSYSVEYNLKTHIQRHHGGDCPVYVCETCGRGMSSRKSLRDHMMIHNDERPYECETCSKSFRKKEHLIDHIRTHTKDKPHSCEFCGRTFTTRKNLRTHIHVSHEGKRHLCEICGKEMASVTSLKNHKKTHTGEKPFACSFCGKRFTKKYHLSVHVNVHTKEKPYACKFCDKKYTQGTSLSLHIRAVHSKERPYVCDICNRGFITKTLLTMHRKSHWTKDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-