Basic Information

Gene Symbol
-
Assembly
GCA_963924575.1
Location
CAWUQC010000003.1:1912448-1913680[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-09 4.4e-06 27.3 2.1 3 59 13 68 11 106 0.83

Sequence Information

Coding Sequence
ATGGAGAATGAGGCAATAAGTGTGGTGTATGGTCACTCTGAAGATTGGCTCTCAACAGATGAATACTACTACGTGTTAAATAATGTGGACCAATCAAAATTTAACACTTATCCTCCAGTACGTCCAAAGCCTGGAGAAATGTACATCTTTCATGACAAGGAGCATAAAGAGAACTGGAAAGCAGACCAATACAGGTGGCGCGATATTCGCATAAAACATATGCCTGCAAAAAAACCCAAGATTTCTTGTCACTATTATAAGGCGTACGATGGAAGTCCATTTTATAAAAGAGCTATCCATCTATTTAATAATATCCTCTGTGATTCGAAGTCAAACAGCTGGGACACTAAAACGAAACTCTTCAAATCTTGTATTGCGGCTGTCCTTCTTTATGCCTCAGAAATTTGGTCCCTCAGATACCTTAAAAACATAGAAAGAGTTCAATTGCAATTCATCAAACGCATCCTTAACTTGCCCAAATGCACACCAGACTCCTACGTAAGACACGAAACTCAGACCAGTAGACTCGAGCTTGAAGTACTGAAGAGTTCCATCAACTGGTGGTTTAAGATTCTTAAAATGCCCGAAACTCGTCTTGTAAAGGTTTGCTACAATCGTTTGAAACATCTGGAGGCTTGTGGTGGTGTACCCAATAAACAGTCCTTAAAGTATAATTGGGTGGGTCAATTTCGTGGGCTATTATCGGACAACAACATGTCTTTTATTTGGGACCAACAGATCTTTTCGTACTCGAATGCTCATTTAAACTCTATAATAGAAGACCGCCTACTTTTGCAAATCAGAAAAGAAAAGGAATGCATTCTTGAGTCTAGGTACTCTGACATATATAGATCTTTGGTAAGCCAGTTTGAATTTTCAGGCCGTTATTTAAAGATAATACAAGATGTAAACAAGACGCGTCTATTTAGCCAGCTACGAATGTGCCACTCCAAAATCTTGTATCTGAGAATAAGGGACACCAAGTACGTTATTGACCAGACCCAAATGTGCTCAATGTGCAACAAAGGGGAGCTTGAAACGATTTTCCATGTTTTCGGGAGCTGTCCACTTTATGAGGGAGTTAGGAAAAGGCATTTGCCGGATTTTGCGCTCTCAGATGTCAACTTTTTAATGCTGCTCCAGTCGGCAGACCATTTAGTGATCACTGGACTTTGTAACTATTTTGAAGACTCTATGAGACTGCGGCGGTTCGTTACGGATGAGGGGGACTAA
Protein Sequence
MENEAISVVYGHSEDWLSTDEYYYVLNNVDQSKFNTYPPVRPKPGEMYIFHDKEHKENWKADQYRWRDIRIKHMPAKKPKISCHYYKAYDGSPFYKRAIHLFNNILCDSKSNSWDTKTKLFKSCIAAVLLYASEIWSLRYLKNIERVQLQFIKRILNLPKCTPDSYVRHETQTSRLELEVLKSSINWWFKILKMPETRLVKVCYNRLKHLEACGGVPNKQSLKYNWVGQFRGLLSDNNMSFIWDQQIFSYSNAHLNSIIEDRLLLQIRKEKECILESRYSDIYRSLVSQFEFSGRYLKIIQDVNKTRLFSQLRMCHSKILYLRIRDTKYVIDQTQMCSMCNKGELETIFHVFGSCPLYEGVRKRHLPDFALSDVNFLMLLQSADHLVITGLCNYFEDSMRLRRFVTDEGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-