Basic Information

Gene Symbol
-
Assembly
GCA_963924575.1
Location
OZ004617.1:55344492-55353739[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-08 4.9e-05 23.9 0.1 4 58 192 244 189 247 0.92
2 3 0.00049 1.7 9.3 0.3 78 114 255 294 251 296 0.86
3 3 5.6 1.9e+04 -3.8 0.0 77 104 376 403 366 408 0.73

Sequence Information

Coding Sequence
ATGGCACCGAAACGTACCACCCGAGCTGGAAGCAAGGCCATGCAAGCGGAGGATCTGCCGACAACACGCGGGTCAGCGCCTCCACCAACTGCGGGGACTTCCAGCGAGGCTACACCAGCATGGGCCACGAGCATCGGGCAGCAACTCCAGGAGCAAGGACGGCAACAGGAGGCTCTGGTGGCTACCCTGCAGCAGTCTCTACAGGGAATGGAACCGACCCGTCCAGCGGTTAGCGACAGCGTCGCCTCCACTTCTAGAGGGAGCAGCACCGTTCCACCGGAGGAGACGGCTACAACCAACACCCCGCCAATTCCGGAGAGCGCTTTACGCACGGAGGGAAACCACCGCGGCGGAACAGAGGATTTGAACATGCGTGGATGGCTTCGTGGTATGCTCGATCGGGCGATTCCAGCTCCCGAGAAACCGAAATTCGAGGGCAAGTTGGATCAAAATCCCCAGAAATTCTTGAAAGGACTGCAGGCTTATGGAAAAGCTTTTGGATTAACGGGGCGAGCATTACTGGGCTTGGCGCAAGAtacAATGTCTGATATTAACAAGGTTTATGCTACTTGCAATTATTGGCTTAAAACCCAGGATTATCTTAGAATGCTTCTGGAAGCAGATTATGAGAAGTGCCTTACACTTCCCCCAGTTAGACCCAAGCCGGGTGAAATAGTAATTTACAAAAGCGAAAATCAAAAAGACTGGAAATCGGACCAATATCGATGGAGATGCCTGGGGATTCATCCTATACCAAAGGAACAACCAGTGGTTTATTGCCATTACTACAAGTCGATATTTGGACGGAGTTTTCAAAAGCGGGCATACACATTATACACGAAGGATCAGATTTATTCGAATACAACACTTATCCACTACATGGGAAGTCTGGACGAAATAAAGCCACTTCCACATGGAAATAGAAAAAAGGATTCAAGAGAACATGTGATGACAGCAAAATCCCAACTTGCAAAGCAGAAAGCCAATCTAAAAGACGCACCTCATAAAGTATacaaaaaactaactttagaAGATGTACATCCCGTTCACGAAGCAGTTCTCCTTCCAAGAGATTGCACTCAAGTGAGTAACACAATAATTAATGAACGCAACAGAAAACTGTTGTCTTCGGACGACGTCATGGGGCTTTACACCCTCACAGAAGAAGTGGAGGGTTTCGTCAAAAGAATTGACTTATTTCCTGACTTATCTTGTATTTTGGTCGATAACAATATGATGGATATTCTCAGAGACCTTTGCCTGCTTAATAACGTTTTGTTCGAATACGATACTACTTTTAATTTGGGGGACTGTTACTTATCTGTTTTGACATGCCAGTTTTCTTTTTTCAAGCCAAAACCAGTAATTCCGATCTTATATCTAATCCACCATAGCAAGTGCGAGGACACTCACGATACTTTCTTTCGGTTTGTCAAAGCAAAATATCCATTTATTGACGGAAATTACATTGTGACCGATAGAGAACGTGCCATATGTAATGCAATTGcaaacaattttgaaaatatgaACCATTTTTTGTGCTGGAATCACATCATAAGAGACGTGGAATTCTGGGTTAAGCGTCAGCACAATGAAACTTTGGCCGATGTAAACAGTTATAAAGCCCATATATGGAGCCTTTTGGACAAGGATTTTGTTGGTCGAGGAAATTATAAAATAGATCCAAAATACGAGCATCTGAAAAAGGACATAGCTGACATAGAATTCCCCAAATTAAAATTTACGTTGGATAGCCTCCCCTATATTTTCGAAAACAGGGATTTTTCTCGAAAAGACTCTACGGATGAAACGCTGCATACACATTTTAGTGTTTCTAAGCAATTGATAACTCAAGGGTGCATCAAGCTTGTTCCCGAGGAACAAGTATTTTTGGTAACGTCCATATCTAATAAAGATAAGAAGCATCCACAGAAGACTTGCTCGTGCAAAGCTAAGAGGGGGTGCCACCACATCAAAGCTTGTGAAATGGCTATAGGGATTACCAAAGAGGACTACAAATCGGCAAAATTGTCCACCCTAATGAAGAAGAAACGTGGTTACAGATCAGGAAGAAAATTTGCTCCCAGGGAAATGACCTTAGTTCGTGCAGCAAATGACTCGATTCTGCAGAAATCAAAAGATGCATCTTCAGCACTAATTCCGGTCAAGATAAAACGCTCCGAATCTGACATAGGTACGTCTAAACTATCCCTTGAACTCAATTCAACCGTAAAGGAAAGATTCTTCGCTGCCACGGCTTCGTTGGAGGATAACTGCTTTTCCGAAGTCGATTTGCCAACTTCCACGCCAAAGATTCGCCGTAAGGATCAAATGTATACCATTGGTTGTTGTGTTGTCCTCGAATCGGACTTGTCGACTTTAGTACCCTGCAAAAAAATGCTTACGGAGAAATTTTGCTCCACGAGAACAAAAACTCGTTCCGGGCCGTTTCCGTATTTTGTGTACATACAAACACACATTATTAATTATCAGCAGAGTAAAGGCGCTTTCAAAACTGCAATTAATTACTTCCTAAAATATGAAGTACCCGAAAATGACATAGTCCTAGTGCCATTGACATGGTTCCAACACCATAGCCTGATTGTAGTACTAAGAAAAGAACGAATGTTTTTACACCTCGACAGCCTAGAGAGTCATCATGCAAGAAAAGCATTGCCCGAGGCGCAAATTtcgtttttattcaaattgTATCATGCTTACAGTGAAATAAAAAATATCCACTTCGTGAGTAGGGAATGGAAAATACATATGCCATCTGATGTACCTCTTCAAAAGAATGGGTATGATTGCGGTCCTTTTGTCTGCCTTTTTATGGAAACACTACTGACTCAAAGCACAAATTCTATTATATATTCAAGCAATATGCAGGAATATAGGCTTcggattaaaaataaaatagaattgTACATGGACAACAATCCGATTGAAGCAAGATCTCAGACAAGAGTTCAAAAAGAAATACTGGAATCTATTATTGAACCTCGTTTTGACCTTTCGTCCATTCCAGTTTCTTTTGAGGCAACCACGAACACATTAAGCACATTGAGTTCCCTAATTAACAACTACTGGGAGGAGGATACGTCCGGTCAGTGTCAATTAGGAGAAGATTGCAATAATGTAGGTGACATTATGGTCTTATGTATTCGATGTGATCACTGGTATCACAGAACTTGTTTAAATTTGAAGGGTCATCCATTACCTAAATATTTTGTATGTCCCAAATGCAAACAATAA
Protein Sequence
MAPKRTTRAGSKAMQAEDLPTTRGSAPPPTAGTSSEATPAWATSIGQQLQEQGRQQEALVATLQQSLQGMEPTRPAVSDSVASTSRGSSTVPPEETATTNTPPIPESALRTEGNHRGGTEDLNMRGWLRGMLDRAIPAPEKPKFEGKLDQNPQKFLKGLQAYGKAFGLTGRALLGLAQDTMSDINKVYATCNYWLKTQDYLRMLLEADYEKCLTLPPVRPKPGEIVIYKSENQKDWKSDQYRWRCLGIHPIPKEQPVVYCHYYKSIFGRSFQKRAYTLYTKDQIYSNTTLIHYMGSLDEIKPLPHGNRKKDSREHVMTAKSQLAKQKANLKDAPHKVYKKLTLEDVHPVHEAVLLPRDCTQVSNTIINERNRKLLSSDDVMGLYTLTEEVEGFVKRIDLFPDLSCILVDNNMMDILRDLCLLNNVLFEYDTTFNLGDCYLSVLTCQFSFFKPKPVIPILYLIHHSKCEDTHDTFFRFVKAKYPFIDGNYIVTDRERAICNAIANNFENMNHFLCWNHIIRDVEFWVKRQHNETLADVNSYKAHIWSLLDKDFVGRGNYKIDPKYEHLKKDIADIEFPKLKFTLDSLPYIFENRDFSRKDSTDETLHTHFSVSKQLITQGCIKLVPEEQVFLVTSISNKDKKHPQKTCSCKAKRGCHHIKACEMAIGITKEDYKSAKLSTLMKKKRGYRSGRKFAPREMTLVRAANDSILQKSKDASSALIPVKIKRSESDIGTSKLSLELNSTVKERFFAATASLEDNCFSEVDLPTSTPKIRRKDQMYTIGCCVVLESDLSTLVPCKKMLTEKFCSTRTKTRSGPFPYFVYIQTHIINYQQSKGAFKTAINYFLKYEVPENDIVLVPLTWFQHHSLIVVLRKERMFLHLDSLESHHARKALPEAQISFLFKLYHAYSEIKNIHFVSREWKIHMPSDVPLQKNGYDCGPFVCLFMETLLTQSTNSIIYSSNMQEYRLRIKNKIELYMDNNPIEARSQTRVQKEILESIIEPRFDLSSIPVSFEATTNTLSTLSSLINNYWEEDTSGQCQLGEDCNNVGDIMVLCIRCDHWYHRTCLNLKGHPLPKYFVCPKCKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-