Pful012721.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- -
- Assembly
- GCA_963924575.1
- Location
- OZ004619.1:12520532-12522703[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-08 5.4e-06 26.9 0.0 2 38 17 53 16 58 0.90
Sequence Information
- Coding Sequence
- ATGCCACGGAAGAATAAAAATAAACGTTTCGGGATTGGTAAAACGACGTCCGAATCAATGCGAAATGCTTTGTACAGCATAAATGAAGAAGGGTTGTCAGTAAAAGCGGCAGCATTGCGATACAACATTCCAAGAACAACCCTTAGAAAATACGTCAAAAAATGTGAAGACCGAAATATTGATTGGGGAAGCATTGCCATGGAAGGTTTACCGAAGTTGGGCCCAAATTACAGAGTGAAGCAGATTTTCAATACAAAAGAAGAAGTTACGATCTCCGAATATCTTCAAAAGATCGCAAAACTAAATCATGGTTTAACACCGAAGGATGTCAGAAAACTTGCGTATGATTTGGCCATTGCCAATAACAAAAAAATCCCCGCTTCTTGGCATGAAAACCAATTAGCTGGGAAGTATTGGATGACTGGGTTTCTAAAACGAAATAAAACTTTATCCATCAGATCAGCAGAGCCAACTTCACTTGGAAGAGCTATGGGATTCAACAAACCGGTTGTGgaacgttttttttttaatctccAACAAGTTTACGACAAATATAATGTGAATCCTGCTCAAATCTATAATATGGACGAAACAGGTCTCACAACCGTCCAATCAGCATGTAAGGTAATCGCAACGAAGGGCCAAAAGCAAGTCGGGCAGGTCACCTCAGGAGAAAGAGGAACTTTAGTGCCCATGTGTGGGACAATAAATGCTCTAGGAAATGCTGTGCCTCCTTTTCTTATATTTCCTAGGAAATATTTTAAACAACATATGATAAAAGGAGCACCAGTTGGATCAGCTGGGGCGGCAACGCCGACTGGATGGATTTCATCAGAGACTTTTATTTTATGGATGAAACACTTTATTTACCACACCAAACCTTCAGCCGAATATCCTGTGCTGCTTTTAATGGACAACCACGAAAGCCACATATCACTTGAAGTTATAAAAATGGCACGCGCAAACAACATCATTCTACTGACTCTGCCACCCCACACCACCCATAAATTGCAGCCATTGGACAGAGGTGTCTATGGTCCCCTTAAAACTTATTATAAAAATTGTTGTCACACTTGGCTACGAAATAATCCCGGTAGAAGAATTACAATTTACGACATCGCAGAAATATTAGGTGAAGCCTACCCTCTCGCATTctctcaaaaaaattgtttggCTGGATTTCGGGCTACCGGAATATTTCCTTACAACAATTTAATATTTGGGGACGATGAATTTCTTTCCGCGGAGGTAACAGATCTGCCGTTAGAACGTTTTCAAGAGGAAGTAGCAGAACCACAAATCAGTAATCAATCTATTGAAGAAGCGGGACCTAGCCATCGCCTTACTGAAGCAGAAGTTGACGAACTAATCGATCGTTCTATCACTCCCGATCCTATTTCAGGTAATGATGGTTTAACCCCTGAGACTAATGAGGTAACGCCAACCAAAACCCCTGAAACTAATCAAGTAACGCCAACCAAATCATTTATTTCTCCTTATATAATAAAACCTTTTCCAAAAGCTAAAGGTACAAACGCAAAAACCACGAAACGCAAGAAGAAAACGACAGAAATATTGACAAGTACTCCAGTTTTTAAAAAACTTGAAGAAGAGTTAGCTCTAAAAGAAAGAAGAAAAGCAGAAGTAATGCAGAAGAAAACTACAAAGAGACAACTTATGGATTTGACAGAAaatgaaaacagtggcgcagaaaTGACCGTTCTAGAACGAAAGAAAACACctaagaaaaaaattacagattTGAAAGAAAATGAAGAAGATGATACAAGTGACAGCAGTGTAGAAATGGTAGACCTGACTGACTCAGATGATGTTAGCTACATCGAAGAAGAAGAGCAAAACGGATGCGATGATTTAAGAGACTTAAGTCATATTAAGGTTGGAAGTTTCGTTGTCGTGCAATTCGCAACCAAGAAAACCACGAAATGTTACGTGGGACATGTCTTAGAAGTTGATGGAGAAGAATTTTacataaattttttgagaaaacgcGGAAACAAATTTCAATTTCCTTCAGTTCTAGACTGTGCGAATGTGGCTTTAAAAGGCGTACTTTTGCATTTGCCAAATTCCACATCAATCCGTGGAACAGCAAGGGCCAAAGACTTGGTGCAATTTCCGATTGATTTGTCTTCTTATAACATGTGTTAG
- Protein Sequence
- MPRKNKNKRFGIGKTTSESMRNALYSINEEGLSVKAAALRYNIPRTTLRKYVKKCEDRNIDWGSIAMEGLPKLGPNYRVKQIFNTKEEVTISEYLQKIAKLNHGLTPKDVRKLAYDLAIANNKKIPASWHENQLAGKYWMTGFLKRNKTLSIRSAEPTSLGRAMGFNKPVVERFFFNLQQVYDKYNVNPAQIYNMDETGLTTVQSACKVIATKGQKQVGQVTSGERGTLVPMCGTINALGNAVPPFLIFPRKYFKQHMIKGAPVGSAGAATPTGWISSETFILWMKHFIYHTKPSAEYPVLLLMDNHESHISLEVIKMARANNIILLTLPPHTTHKLQPLDRGVYGPLKTYYKNCCHTWLRNNPGRRITIYDIAEILGEAYPLAFSQKNCLAGFRATGIFPYNNLIFGDDEFLSAEVTDLPLERFQEEVAEPQISNQSIEEAGPSHRLTEAEVDELIDRSITPDPISGNDGLTPETNEVTPTKTPETNQVTPTKSFISPYIIKPFPKAKGTNAKTTKRKKKTTEILTSTPVFKKLEEELALKERRKAEVMQKKTTKRQLMDLTENENSGAEMTVLERKKTPKKKITDLKENEEDDTSDSSVEMVDLTDSDDVSYIEEEEQNGCDDLRDLSHIKVGSFVVVQFATKKTTKCYVGHVLEVDGEEFYINFLRKRGNKFQFPSVLDCANVALKGVLLHLPNSTSIRGTARAKDLVQFPIDLSSYNMC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277751;
- 90% Identity
- iTF_01277752; iTF_01277751; iTF_01277753;
- 80% Identity
- -