Pful007358.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- -
- Assembly
- GCA_963924575.1
- Location
- OZ004617.1:53661157-53670166[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-07 0.00015 22.3 0.0 10 42 35 68 34 70 0.84 2 2 0.58 89 3.8 0.0 27 44 803 820 803 821 0.90
Sequence Information
- Coding Sequence
- ATGGGAGGTTTTGTGGGTCAATTTTTCAAGGGTTATATCGGACAATACGCAAAAAATGCCTCGGAAGCACAAACACATTCCTGGCACAGCATACATACATTAAGGGCTGTGATAGATAGAAATTTTAGCTTTAAGCAAGCCTCGGATACCTACGGTGTGCCAACATCAACATTGTACGATAAGTACAAAGGGCTCCATACGGATACATTGGGAAGGCCACCTGTTCTAAGCACTACAGAAgaaaaaaatatagttgatGCAATGTTCTGTGCTGCAAATTATGGCTACCCTTTTGGAGATAGCGAAATTAAGGAGTTTGTCAAGATTTACTTAGATCGCCTTGACTGGATCCAGTATTTTAAAAGCAGGAATCCTGAAGTCGCCAAAAGGAATTGTGAAAATGTCAAAAGACATAGGGCTGAGTTGAGTCCAGAAACTGTCAACTTATATTTTAATAATCTTAATGACGAACTAGTGGATGTTCCTCCAGGAAATGTCATAAACTATGATGAAACTAATTTGACAGATGACCCGGGCAAGCAGAAGGTTTATGTTCAAAGAGGGAACAAACATGCCAGAAGAATAATCGACCATTCTAAAAGCTCTACTTCTATTATGTTTGCTTGTGCTGGCGATGGGGAATTGTTGCCTCTCTATttacagtacccGGAATGGCTTGAAGGTGGTCCTCCTAATACGCGATATAATAGAAGCAAAAGCGGATGGTTTGATGCAGCTATCTTCGAGGATTGGTTTGTGAAAGTTGCACTCCCTTATTTGAAGAGAAAGCCTGGAAAAAAAGTTGTAATAGGCGACAATCTTGCTAGCCACTTGTCAGTGAACATCATCAGGCTGTGTGAAGAAAATCACATATCATTTGTGTTCTTACCGCCCAATAGTACGCAGGTGTGCCAGCCTTTGGATGTGGCTGTGTTCCGCCCGGTCAAAATTGCATGGCGCAAGGTTTTGCTGAAATGGAAAAAAGTGAACAGAGGAAGTCTCCCAAAAACAGAGTTTCCAAAAATTCTAAAGGAATTGCTGCATGAACTTCAACCAAATATGGAAAACAATATAATAGCTGGATTTAAAGCAAGTGGCATTATTCCCCTCAACCCGGATGAAGTGACGAAGAGGTTGTTTGGAGCCCAAAGAAAACGACAGCTCAACTCTACTGCACTATCACAGTCATTTGACAATATTATGAAAAAGAATGTGACAAATCCACAGAACCCACAGAAGAAACGATCCAAAAAAATGGATATTCAAGCAGGAAAATCTGTAAGCCTCAGGGATTTTAATAATTCACAGGATAGGGCTGGTTCTTCACGAGAAACAGATGAAACTGAACTTGACGTGGACATTCCTGAAAATGAAACTGAAATAGACAATCCTCAATATGAATATGAATCTGAAAGTGACAATCCCGAACATGAAACTGATGAAAATGAGACTGAGATGATGGATAATCTAGATTATGATGAACCTTACAATGAAGACAATGTGATACTAGAATCATTAAGGGCATTTACGGTGCCAGCCGCCACCCCGGTGTTCTTAAACTCGGAATCATGCTGGCCGACAAAAAACAGGAAGCTATTGCTCGCTCTTGAGAGCAATGAACAGCTGGCCTTGCCAAGACTTGTTCCCAAGAACACAAGAGAATTCACCCTGTGTGGATATGGCGAGGATCAGATTCACGTTCTTATCCTGTATACTACCCAAAGCGACTTTCTGGAGAATATCTGCCGAGACAAGGGCATCGAAGACGACGTTGTTGATGATGACGCCGAACCTTCCGAGCAATCTAATAATTGTGCCTCAATCTCAGATTTATGGACAAAGGGATACTACCAGTTCCATAATTTTGGAGGCTTTAACTTAGGCGGCACGATCTCCATTCGAACGAATATTTACTACCCAGGCAGAATTACGTACATGCAGGGGTACGAACCCGGCGTACACGTAATTAAGCCGCATAAACTGACGCTGTCCTTTGCCTCGGCGATGCTCCTAAATGTCGAGAAAGCGAGAGTGAAAATTCTCCAAAATATGCATCACGAAGTTCGTAACGCCTTTGAGGCTTACAGTGAATATTTAAAATACATCAGTACAAGCGCACCCAAAATTCGTTCGGAAATAGTGCAAACAATTACGGAATTAGAAGAGCTCTCCTGCCAGTATGTAACCGCCGATGGTGAACaacgaaataattttttatttcccGACGATAATTTCCTCGTTCCTCTAGTGGAAGGAGTGATTGATTCCGAAGAAACGGGAGGGAGGTATCTTGAAATATTGACTGATGCATATTCCAAGCATTCCATACTGACTGATATACGGGAAGTTTTGAAAGCCCACGTCGCAGAAACCCTTTTGAAATATTATCTGAGCGGAACGTCAGAAGGGATTTCAAACACCACCCTTAAGATGTGCTTTAGAAATGCCACGCCGCTTAAATCTTGCGATGCTGAAGGAATTATACGCTTCCAGGATTTCGAAAATTTACTCAAGGATGACAGGTTCAACCTGATCGTAGGTCGTGAAATAGGACAGAGAGATTTCAGGAGCTCCATTCCCCAAATAAAGAAATACATTTTAATTATCTTCGAAACTTTGTACAAGGGTGCAGTTCCAGCAGAAGACATGAAAGAATTCTTTTCCGACCCAAAAGATATCCCCAAATTCGGTGGTGACATTGCAGAGTTAGAGCGGTACGTGTCGAGAATTTTTCGTCTGATGACCATATATGGTCATTACTGCAGGACACATTGCGGAATCGATTACGCAGTAGCATCAAATGTAAGGCGTCCGAATTTATTTAGAAAAGAAAGCATTCTCAATGCTTTAAAAAAACGGAAAGTCGATGACAGGGTACGACTATATGTCGGCGTCCTAAGAAATCAAGTCGACATAACATACTACAAATCATTTACTAGAGACCTAAAAGCAGAGATAAGAGATGCTAAACAGCTGTGCAACTCTAACTACATCATGCACGCCAAAAATATAGTTAAGGCCACCTGGAACCTAATAAAAGAGACAACACAGAATGCTCGTCCCGCCGAAATTGACGTTGAAGCTATTGACACAGATCTCACTGGCAACCCTGATATCAATCAGAAATTGAACTACATTAATCTTCTTCTAATCTTCTTCTAA
- Protein Sequence
- MGGFVGQFFKGYIGQYAKNASEAQTHSWHSIHTLRAVIDRNFSFKQASDTYGVPTSTLYDKYKGLHTDTLGRPPVLSTTEEKNIVDAMFCAANYGYPFGDSEIKEFVKIYLDRLDWIQYFKSRNPEVAKRNCENVKRHRAELSPETVNLYFNNLNDELVDVPPGNVINYDETNLTDDPGKQKVYVQRGNKHARRIIDHSKSSTSIMFACAGDGELLPLYLQYPEWLEGGPPNTRYNRSKSGWFDAAIFEDWFVKVALPYLKRKPGKKVVIGDNLASHLSVNIIRLCEENHISFVFLPPNSTQVCQPLDVAVFRPVKIAWRKVLLKWKKVNRGSLPKTEFPKILKELLHELQPNMENNIIAGFKASGIIPLNPDEVTKRLFGAQRKRQLNSTALSQSFDNIMKKNVTNPQNPQKKRSKKMDIQAGKSVSLRDFNNSQDRAGSSRETDETELDVDIPENETEIDNPQYEYESESDNPEHETDENETEMMDNLDYDEPYNEDNVILESLRAFTVPAATPVFLNSESCWPTKNRKLLLALESNEQLALPRLVPKNTREFTLCGYGEDQIHVLILYTTQSDFLENICRDKGIEDDVVDDDAEPSEQSNNCASISDLWTKGYYQFHNFGGFNLGGTISIRTNIYYPGRITYMQGYEPGVHVIKPHKLTLSFASAMLLNVEKARVKILQNMHHEVRNAFEAYSEYLKYISTSAPKIRSEIVQTITELEELSCQYVTADGEQRNNFLFPDDNFLVPLVEGVIDSEETGGRYLEILTDAYSKHSILTDIREVLKAHVAETLLKYYLSGTSEGISNTTLKMCFRNATPLKSCDAEGIIRFQDFENLLKDDRFNLIVGREIGQRDFRSSIPQIKKYILIIFETLYKGAVPAEDMKEFFSDPKDIPKFGGDIAELERYVSRIFRLMTIYGHYCRTHCGIDYAVASNVRRPNLFRKESILNALKKRKVDDRVRLYVGVLRNQVDITYYKSFTRDLKAEIRDAKQLCNSNYIMHAKNIVKATWNLIKETTQNARPAEIDVEAIDTDLTGNPDINQKLNYINLLLIFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -