Pful005524.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- cheC
- Assembly
- GCA_963924575.1
- Location
- OZ004617.1:41266954-41268852[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-13 1.2e-10 41.8 0.0 5 39 1 35 1 40 0.86
Sequence Information
- Coding Sequence
- ATGGAAGGTGCCATAAAAGCAGTTCAAAAAGGACTGTCAATCAGAAAGGCTGCAAGAAAATTTAATGTGCCATACACCACTTTGAATGAAAGATCAAAATCTGGTCAGTTTACTTCTCCTCAACTGGGAAGGAAGGCCGTTTTCACTTTAGAACAAGAGAAAGAAATTGCAGCTTATTTGATACAAATGGCCAAGCTATTTTATGGGGTGTCAACAACAGAGTTGCGTAAAATAGCGTTTGACTTCGCTGAAAAGAACCATGTTCCAAATTCTTTCGACAAAGAAAAGCGCATGGCCGGAAAGGAATGGGTATCTGGttttttgaaaagaaataaACGTATTAGTCTACGGAAGCCTGAATCTACAAGTTTAAATAGGGTCCTTGCATTCAACAAAACAGAAGTTTccttatttttcaacaatttagAAGCCCTGATGACTAGATATGAGTTCGAAGCATCACGAATATGGAACGTTGATGAAACAGGAATTACCACCGTTCATCGACCCGGTCAAATATATGCCCAAAAAGGACAAAAACAAGTAGGATCCATTTCAAGTGGAGAAAGAGGAAAGAACACAACAGTATGTTGTGCCATTAGCGCATCAGGTTCTTATGTGCCGCCTATGTTCATTTTTGCTCGCAAAAGAATGGCACCTCAATTATCAAAGAATGGACCACCCGACTCAGTTTATGAATGTTCAAAAAGTGGCTGGATGACTGAAGAATTATTTTTAACCTGGCTGAAACACTTCTCTAAATACTCAAAACCGTCAAAAGAAAATCATGTTCTGCTTATTCTAGATAATCATTCCACACATATTACATTGGCAGCTTATGAGTTTTGCAAGTCTAATGGTATAATTATGCTTTCGTTACCTCCTCACTCGTCCCATAGGATGCAACCCCTAGATGTTACATTCTATGGACCTCTTAAGAAGGCCTATAACAGAGAATGTGAATTTTATATGAAATCGCATCCAAACGAAAGGATTACCACTTATGAATTAGCAGAACTGTTTTACAAGGCATATGGAAAAGTAGCTACTGTTTCTAATGCAGTTAAAGGATTCGAAACTTCTGGCATATTCCCCATTAATAGGGATATATTTCAAGATTACGATTTTCCACAATCAGATTGTGAAGGCGATGTACAAATTCAACCAGGTCCATCGTCTTCGAAAGACATACCAGGACAAAGCTCTTCAAAAGTCATACCAGAGCAAAGCTCTTCAAAAGTCATACCAAAGCAAAGCTGTTCCAAATCCATATCAGGGCAAAGCTCTTCAAAAGCCATACCAGAGCAAAGCTCTTCAAAAGTCATACCAAAGCAAAGCTGTTTAAAAGCCATACCAAAGCAAAGCTCTTTAAAAGTCATACTAGAGCAAAGctcttcaaaagttacaccaGAGCCAAAGCCATCTGAAACCGCTATGGAAAATTTAGCATCTCCTAATACATCGACAGTCTCTTTAGAAGAAATATACCCACTGCCAGTCTTAAGAGCAGCTTCTACGACAACCAAAACTGACAGGAAACAACATTCCAAAATTTTGACCGACACGCCAGTGAAGGATGAGTTGGAACGAAAAGAAATGAAACGTCAAATTAAAAGTAACAAAAATCAGATTaataaaaaatcagaaaaaatcaaaaaagtaaAGAAAAAGGTATTTGTTAGTTCTTCTGAAGATGAATCTGCTGAGAATTTGGGCAGTGATGAAAGTGACCTGGATACGGAATTGAAAACCAAGAATGATACCTGTAATATTTGTTTGGAATTTGGCAAAAATGGTGAAATTTGGTTCCGATGTGTGAGGTGTGGTTCCTGGGCCCATAAGGCATGCACAGGATTTGAAAAACCAAATCAATATATCTGCGATTTTTGTAGAAATTGA
- Protein Sequence
- MEGAIKAVQKGLSIRKAARKFNVPYTTLNERSKSGQFTSPQLGRKAVFTLEQEKEIAAYLIQMAKLFYGVSTTELRKIAFDFAEKNHVPNSFDKEKRMAGKEWVSGFLKRNKRISLRKPESTSLNRVLAFNKTEVSLFFNNLEALMTRYEFEASRIWNVDETGITTVHRPGQIYAQKGQKQVGSISSGERGKNTTVCCAISASGSYVPPMFIFARKRMAPQLSKNGPPDSVYECSKSGWMTEELFLTWLKHFSKYSKPSKENHVLLILDNHSTHITLAAYEFCKSNGIIMLSLPPHSSHRMQPLDVTFYGPLKKAYNRECEFYMKSHPNERITTYELAELFYKAYGKVATVSNAVKGFETSGIFPINRDIFQDYDFPQSDCEGDVQIQPGPSSSKDIPGQSSSKVIPEQSSSKVIPKQSCSKSISGQSSSKAIPEQSSSKVIPKQSCLKAIPKQSSLKVILEQSSSKVTPEPKPSETAMENLASPNTSTVSLEEIYPLPVLRAASTTTKTDRKQHSKILTDTPVKDELERKEMKRQIKSNKNQINKKSEKIKKVKKKVFVSSSEDESAENLGSDESDLDTELKTKNDTCNICLEFGKNGEIWFRCVRCGSWAHKACTGFEKPNQYICDFCRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -