Pful005555.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- TIGD6
- Assembly
- GCA_963924575.1
- Location
- OZ004617.1:42064726-42067079[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-13 5e-11 43.0 0.0 1 41 22 62 22 64 0.95
Sequence Information
- Coding Sequence
- ATGGGATACCACCAATTGCTAATTCCAAGTGAATATAAGCGCAAAACCGAGAGACAATCTTGGTCTGAAGAATCAATGATTGAGGCTTTAGAGGCACTCAGGAATGGAACTTGCGGATTTTTAAAAGCTGCAAAACAATTTGGAATTCCAAAGTCTACTTTGGAGCGAAGGTTTAAGGAGAAGAATAAAAATGCCACAGGACATTCCAAGGGGCTTGGCAGTAGGAAACTTACATTTCCAATTGAACTGGAACAACAATTAGTCGAATACGCTAAGAATATGGAAGGGATGTTATTTGGCTTAACAACCAAAAGCATTCGCAGTCTCGCTTATCAACTTGCCGAAAAAAATAATCTTGAACATCATTTTAATAAGGAATTAAAATTGGCTGGATGGCACTGGCTGCATTCGTTTCTTAAGAGGAACAAGTTGTCTCTTCGACTACCTGAGGCCACCTCTGCTGCTAGGGCAAGAGGTTTCAACAAAGAGGCCGTAATGTCCTTTTTCAATATTCTAGAACCCCTgcaagaaaaatttattttttcaccGGATAGAGTGTTCAACGTAGATGAAACAGGCATTACCACGGTGCAGGGTCGTCCATCAAAGGTTGTAGCTGTTAGAGGTCGAAAACAAGTAGGCACTCTTACATCGGCCGAACGTGGTGAGCTGACCACAGCAGTGATTTGCATGAGTGCAAGTGGATTGTTTATTCCGCCCATGCTGATTATTCCTAGAGTGCGTATGAAGCCTCAATTCCTCGAAGGCTCTCCACCCGGTACTTTAACAGTTGCTCAAAAGTCAGGATGGATGCAGTTGGATCTATTCGAGAAATGGTTTGATCATTTTCTTGCTCATGCCAAACCGTCGAAAGAGAACCCTATATTGCTTATTTTGGATGGACATGAGActcataccctaaatatttcaaTCATAGATAAGGCAAGAGAGAAAGGAGTAACAATCTTATGTCTACCTCCGCATTGCAGCCACCGAATGCAACCCTTGGATGTTTCATTCATGTTTCCTCTAAGCACTTTCTATACCCAAGAACTAGAAATTTGGTTGAGGAATCATCCTGGACGATGTGTAACGGTTACTGAAGTTCCATCTTTGTTTGGAAAAGCTTATCTCCGAGCATCTACACCTTTGAATGCGATCAACGGATTTGAAAAAACTGGATTATATCCGGTGAATCGTACAGTATTCACAGAAGAAATGTTTGCAGCAGCTTTGCCAACAGACAAGCCACAGGAACAGGTTAACGTGATGGATCCGGTACCCAATGAAGAAATTCCAGGACCAGAAGAGATTGATGATGATGACGTCCTTATTAGAGAATCTACTCCGGAAAATCAAATTATTCATGATCAATCGAAACAACCTGAAGAGACGAAAATAGATGATAATTTACCAACTCAGGATATCAATTTACCATCCACCAGCACTGGATTAACTTACTTCAGCCCCGAGCAGATTGCTCCTTATCCGAAAGTTTCGGGGAAACAaccttcgaaaattttgaaaagaagAAGGGGCAAGGCGGCCAACCTCACAAGTACACCTTACAAACAGGAATTAGAAGAAAGAACAAGAAATGTGAAAGTTAAAATGGTAAATTCAAACACAAAAATTAAAGACTTAAAAGTCAAAAGCTCTACCAAAATTAAAAAGGGCAAGGGTAAAGCGAAAATGTCTAAAAAATCCAAGAGTAGCAGCGAATCATCAGGGAGTGAACAAGAAGACGATGCACGATGTTCTTATTGTAGGAAGAAGTATTCAAAAGATCGTCGTGGAGAAGGGTGGATTAAATGCCGTACCTGTGCTAACTGGGCCCATGATGGATGCGCAGGCGTTGTAAGCGATGACGAAGACGATATCTTCACCTGCGATACCTGCAGGGATTGCTGA
- Protein Sequence
- MGYHQLLIPSEYKRKTERQSWSEESMIEALEALRNGTCGFLKAAKQFGIPKSTLERRFKEKNKNATGHSKGLGSRKLTFPIELEQQLVEYAKNMEGMLFGLTTKSIRSLAYQLAEKNNLEHHFNKELKLAGWHWLHSFLKRNKLSLRLPEATSAARARGFNKEAVMSFFNILEPLQEKFIFSPDRVFNVDETGITTVQGRPSKVVAVRGRKQVGTLTSAERGELTTAVICMSASGLFIPPMLIIPRVRMKPQFLEGSPPGTLTVAQKSGWMQLDLFEKWFDHFLAHAKPSKENPILLILDGHETHTLNISIIDKAREKGVTILCLPPHCSHRMQPLDVSFMFPLSTFYTQELEIWLRNHPGRCVTVTEVPSLFGKAYLRASTPLNAINGFEKTGLYPVNRTVFTEEMFAAALPTDKPQEQVNVMDPVPNEEIPGPEEIDDDDVLIRESTPENQIIHDQSKQPEETKIDDNLPTQDINLPSTSTGLTYFSPEQIAPYPKVSGKQPSKILKRRRGKAANLTSTPYKQELEERTRNVKVKMVNSNTKIKDLKVKSSTKIKKGKGKAKMSKKSKSSSESSGSEQEDDARCSYCRKKYSKDRRGEGWIKCRTCANWAHDGCAGVVSDDEDDIFTCDTCRDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277624;
- 90% Identity
- iTF_01277624;
- 80% Identity
- -