Basic Information

Gene Symbol
ct
Assembly
GCA_963924575.1
Location
OZ004625.1:14128190-14203707[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-27 2.7e-23 82.7 0.0 2 72 389 460 388 465 0.95
2 3 1.1e-32 1.9e-28 99.2 0.0 2 77 761 837 760 839 0.96
3 3 1.2e-30 2.1e-26 92.6 0.0 3 75 972 1045 970 1049 0.95

Sequence Information

Coding Sequence
ATGCAGCCTTCGGCCACGGCTTCCATTCCGCCCTCCGCGGACATGGACCTGCAGACTGTTCAATCCATGGACTGGCTCTTCAAGAAGGAAAAATTCTATCTTCTTGTGCAATTCTGGCAGCAGAGGGCGGCATTGGCGGAGAAGGAGGTGACGACGCTGAAAGAACAAATCGCAAACAATACAACGAATAACTGTGAGAACAAGGACGGGAGCAATATGGACAGACAGAATTTTGAGAACGAAATCGCTGCCAAAGACAAAGAAATCAATCAATTATTAGAAGAAGTACAAAGACTACAGAGCACGCTAACCAAACTCAAGGAGACCTCTTTCACGCAGATATCCAGGCTGGAGGACCAACTGGAACAAAAGAGGCAGCACATCGTAAGACTGGAGGCAAAACTCGACTTGCAGAGGGACTACGACGATCTCAAACGCGAACTCAGCATACTGAGGCCGGAATTGTCAAACAACATCACCGACACGAAATCCCTCGACttggaaaaatcgaaaaacgAGAACAGGGTCAAAACGCCAACACAACAAGAGGTCGAAGGGGTAGCCTTAAATCCGATGTCTTGCCAATCGGGTGAAGCACTGTCCCCATTGTCCCCCCCGCCATCCCTGCCGCGACCCTTCCAGAACGTTGAAGCATTCGGTAGTGTGTTAGGTGAAGAAATCGTGGCCAATTGGCGACGTACCATAGAACACAATAACCGTCTAATATCccgatcaccctgtatagatgtGAAACCGCCGACGACGCCCATCATGGTGGCCCCCGACACCCTCTCAAACAATAACGAAAAATCGACGGCGTCGACGCCCCAACCACAAGAATCACAACCACCCCAATCCTCCCCAATCGAGCCGATCCTCAACGGGAATCCCAAGAGTCCAGAGGACAACAACAACCATCACCTCAGCAACAACAACATCCCTATGCCCACCATGTGCTCTGTCAACAACTTCCTGAGGGGGGAGGAGACACTCAAAAGCCCCTACAGGTTCGACGATCACAGATCGCCGTTCCGGTTCGCGGAAGAGCTGGGAATGGCACCTGGTTCTATGGTAAGCCGCCTGGGGGAAAGCCTCATCCCCAAAGGCGACCCCATGGAAGCCAAACTGCAGGAAATGCTGCGCTACAACATGGACAAATACGCTTCGCAAAACCTGGATACCTTGCACATATCGAGAAGAGTTCGAGAGCTGCTTTCGATCCACAACATCGGTCAAAGACTGTTCGCCAAGTACATCCTAGGCTTATCCCAGGGGACAGTTTCGGAACTACTCTCCAAACCTAAACCTTGGGACAAATTAACGGAGAAAGGGAGAGACAGTTACAGGAAGATGCACGCCTGGGCCTGCGACGAACAAGCAGTCCTCCTCTTGAAATCCCTGATACCAAAGAAAGGCAAAGACACGGGAATGCCCACCTTTGGACGTGCCGAAAACGATATGACTGAAGAACGAATAGCGCACATTCTAAGCGAAGCCAGCCAGTTCCAGCAAATCAAGGGGCAGAGCACCGAGGACAGTCGCAGCAACGACGACTcgaaatcaccccacaaccagtGCTTGAGCCCCTTCTCTAAAGATTCATCCCAGAATCGACGACTGAAGAAATACGAAAACGACGACATTCCACAGGAGAAGGTGATGAGGATCTACCAGGAAGAACTAGCGAAACTTATGGGAAAGAGGATTGAAGATTTCAGGAATCCTCGTGAAGGCGGCTTTCCAAGtatgtttttcccTCAACTGTTTAGCGGTGGTCAAATGGATAGGACGCAGGAGGAGATCAGGATCGCTTTGGACGCCTACCATAGAGAAATTATGAAGTTGAGCCATGGCAATCCTGGGCAGATTCCAAATTTGGGGTTGTTAGCCCTGCAACAGCAGGCGCTAGCCCACCAACAAAACGGAGGGGTACAAGACTTATCTTTGCCAAAAGACAAGAAATTAGTCAACGGCGAAGACAAAGACGCCAAAGACGAAGAAGCTCTTCGACATTCGGGCAGCGCCTTCAGTTTGGTTCGACCAAAAATAGAGCCAGGATTACAACCATCCGGCGGTTCGACAGCTTCCAGTCCTTTGAGCAACACAATTTTACCACCGAGTGACGATTTCCCAAGCTCGGCCGTAGCCAGCCCCCTTCAAAGGATGGCATCAATCACAAATTCTCTAATTTCCCAACCCCCTTCACAACCACATCACACGAGCAGTCAAAGACCACTTAAAGCAGTTCTCCCCCCAATAACCCAGCAGCAATTCGACCAGTACAACAACCTCAACACCGAAGACATCGTGAAGAAAGTCAAGGAACAACTCAGTCAATACTCGATAAGTCAAAGGCTATTCGGAGAATCAGTCTTGGGGTTGAGCCAAGGCTCGGTCAGTGATCTCCTAGCACGCCCTAAGCCTTGGCATATGTTAACCCAAAAAGGGCGGGAGCCCTTCATCCGCATGAAAATGTTTCTAGAGGACGATAACGCCGTTCATAAATTAGTAGCCAGTCAGTACAAAATCGCCCCCGAGAAACTAATGAGGACGGGGGGTTACGGGGGGGCAGTTCCGATATCCAAACCGATGCCCCCCACGCAAAAAATGCTGAGCGAAGCTGCAGGTCTCATCAACAAAATGCAGGAGACGCAGAGTTTGCTTCCGCCCTCGTTACAACTGGGACCTCCTCCTCCTCATCTTAATCAAAATCCGCAACAACCTCCGATGCTGCTGACACCTCCCGGGGTGCCTCCACATCACGTGATTAGCCTTCCAAATCCAGACCATATGAAGAAATCAAACCCAAGTCCTCACGGAATACCTCATTCGCCGTTGGGGCCGCACCACGCAGCCTTGAGGAACATGCACCAGCATATGTCGCCCAGCGTTTATGAAATGGCGGCGCTCACGCAGGATCTCGATACTCAGGTCATCACGACGAAGATCAAGGAGGCGTTGCTGGCCAACAACATCGGACAAAAGATCTTCGGCGAGGCAGTCCTGGGGTTGTCTCAGGGCTCCGTCAGCGAACTCCTCTCGAAACCCAAGCCCTGGCACATGCTGAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTTTGGCTCAACGACGCCCACAACATCGACCGCCTCCAAGCCCTCAAAAACGAGCGACGAGAGGCCAACAAAAGGCGTCGCTCGTCGGGGGGCCCCGGAGCCCACGACAACAGCTCCGACACCTCCTCCAACGACACCTCCGAATTCTACCATTCCAACTCCCCCGGCCCAGGTCCGACGAAGAAGCAACGAGTGCTCTTCTCCGAGGAGCAGAAGGAGGCCCTCCGTTTGGCCTTCGCCCTCGACCCCTACCCCAACGTGGCTACCATCGAGTTCTTAGCATCCGAGCTGGGGCTTTCGAGTCGAACGATAACAAACTGGTTCCATAaccatcggatgcgcctcaaaCAGCAAGTGCCCCACGGTATGGCGTCGGATATCCCCCCAAGGGACCAAACGGGCAACCAGGGCCCCTTCGACCCTGTCCAATTCAGACTGTTGTTAAACCAAAGACTATTAGATTTATCGAAAGAACGGATGGGGTTGGGGGGGGTGCCTTTGCCCTACCCCCCTTACCTCGCCGCCAACACAAACTTGGCGGCGTTAATCAACCGCGGCCTACTACCCAACGAAGTGGACATGACCGCCCTCAGCAATGCTATGAAAGAACAAATGAGCGGTTTGGACTTGTCGATGCCGTCGCTGAAACGAGAACCGGGTGATTATGACGACGATGACGACAGCAACGACGGTTCAGAAGATTCCAACCTCTCCTCCAGTAGCTTGATAAAATCGGAACCCAAAGAGACTCCTGTTCAGAACAGGAGTTCGCGGAGAAAACCGGCTGCGCCTCAATGGGTCAACCCGGATTGGCAAGACAACTCGGAAAAAGAGAAACCTGTCGGAGACGAGGTGATAATTAACGGGGTTTGCGTCATGCAAACGGAGGATTACGGCCGAAGAAATTCCGAAGAAACTGTTAGAGTAGAACCCACCCCCGTTTTGGACAGGTTCGAGGACGACCAAAGCGACGCCTCTTCAATCAGCAACGATAACGAGccccaaaatcaaaacgaaaacaAAGACAAGATTGAAGAAACGCAAGAAGAACAcaaagaagaagaaaaacaaGAAACGGAAGACGAACGGTGGGATTATTAG
Protein Sequence
MQPSATASIPPSADMDLQTVQSMDWLFKKEKFYLLVQFWQQRAALAEKEVTTLKEQIANNTTNNCENKDGSNMDRQNFENEIAAKDKEINQLLEEVQRLQSTLTKLKETSFTQISRLEDQLEQKRQHIVRLEAKLDLQRDYDDLKRELSILRPELSNNITDTKSLDLEKSKNENRVKTPTQQEVEGVALNPMSCQSGEALSPLSPPPSLPRPFQNVEAFGSVLGEEIVANWRRTIEHNNRLISRSPCIDVKPPTTPIMVAPDTLSNNNEKSTASTPQPQESQPPQSSPIEPILNGNPKSPEDNNNHHLSNNNIPMPTMCSVNNFLRGEETLKSPYRFDDHRSPFRFAEELGMAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAVLLLKSLIPKKGKDTGMPTFGRAENDMTEERIAHILSEASQFQQIKGQSTEDSRSNDDSKSPHNQCLSPFSKDSSQNRRLKKYENDDIPQEKVMRIYQEELAKLMGKRIEDFRNPREGGFPSMFFPQLFSGGQMDRTQEEIRIALDAYHREIMKLSHGNPGQIPNLGLLALQQQALAHQQNGGVQDLSLPKDKKLVNGEDKDAKDEEALRHSGSAFSLVRPKIEPGLQPSGGSTASSPLSNTILPPSDDFPSSAVASPLQRMASITNSLISQPPSQPHHTSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGAVPISKPMPPTQKMLSEAAGLINKMQETQSLLPPSLQLGPPPPHLNQNPQQPPMLLTPPGVPPHHVISLPNPDHMKKSNPSPHGIPHSPLGPHHAALRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGGPGAHDNSSDTSSNDTSEFYHSNSPGPGPTKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGMASDIPPRDQTGNQGPFDPVQFRLLLNQRLLDLSKERMGLGGVPLPYPPYLAANTNLAALINRGLLPNEVDMTALSNAMKEQMSGLDLSMPSLKREPGDYDDDDDSNDGSEDSNLSSSSLIKSEPKETPVQNRSSRRKPAAPQWVNPDWQDNSEKEKPVGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVLDRFEDDQSDASSISNDNEPQNQNENKDKIEETQEEHKEEEKQETEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00870456;
90% Identity
iTF_01277577;
80% Identity
iTF_01277577;