Pcon008910.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963942525.1
- Location
- OZ012638.1:1105004-1108060[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.3 7.5e+03 -3.0 1.4 14 19 190 195 190 195 0.86 2 19 0.67 3.8e+03 -2.0 0.6 4 10 226 232 226 232 0.93 3 19 1e-07 0.00057 19.8 16.9 1 19 240 257 240 257 0.99 4 19 2.5 1.4e+04 -3.8 1.8 5 10 282 287 282 287 0.93 5 19 4.2e-05 0.24 11.4 11.0 1 19 293 313 293 313 0.97 6 19 8e-08 0.00045 20.1 13.5 1 19 348 366 348 366 0.99 7 19 2.1 1.2e+04 -3.6 0.9 2 8 392 397 391 398 0.59 8 19 1.6e-07 0.0009 19.1 11.0 1 18 401 418 401 419 0.98 9 19 0.56 3.2e+03 -1.8 0.2 8 12 435 439 434 440 0.76 10 19 3 1.7e+04 -5.0 2.3 5 10 442 447 442 447 0.91 11 19 0.052 2.9e+02 1.5 16.7 3 18 455 470 453 471 0.91 12 19 1.6e-09 9.2e-06 25.5 12.2 1 18 480 497 480 498 0.97 13 19 0.0042 23 5.0 12.5 9 18 544 553 535 554 0.91 14 19 0.12 6.5e+02 0.4 6.6 3 12 567 576 566 576 0.88 15 19 0.02 1.1e+02 2.8 4.6 3 11 649 657 641 658 0.76 16 19 1.8 1e+04 -3.4 1.9 15 19 671 675 670 675 0.82 17 19 0.08 4.5e+02 0.9 16.1 4 18 688 702 686 703 0.94 18 19 3 1.7e+04 -4.6 1.7 9 13 709 713 708 713 0.75 19 19 2.1e-05 0.12 12.3 13.7 1 16 752 766 752 771 0.94
Sequence Information
- Coding Sequence
- atgtcaaATTATCGTTCGCCAACAAATCCATGGGGTAATCAAAAGAATTCCAATGGCTTATCAGCATCGCAGACAAGCCACAGCTCGATtgatacaaaaaagaataaaaataagaaaaagacgCAACCACAACAGCAACctgtgaataaaaataaagtctcggagcaaaaatttaaagatgCACACAGTAAAAATGTGGAAGCTGCTAAAAAGCACGTTAAAGATTATGAGTCCAGTTCAGATGAGGAAGAATTGCAAAATGTCAATATTATTGAAAGTGTATTCAAAAGTTACAGCGGTGTGTCCAGTGATTTAGAAAAGACTCAGCAATTTctagaaaattcttttcagTCAGGTTCAGCGATTTGCTTGATTTGCATTGGAACTGTAAAGCGGGTTGATGCgatATGGAGCTGTGGCAACTGTTTCTGCTTCTTTCATCTATCTTGTATCCAACGATGGGCAAATGATAgtatttcattgaaaaaacTGCATGCTGACAAGGAGACagcttattataataattctggTGAATATGTtccgaaaaagaaaatttccatAGATTTTGACTGCCCCAAGTGTCGTACAGTGTATATGCCGGAAGAGatTCCACGGTATTATACATGCTTCTGTGGCAACGAAACAAATCCACAATTTCATCCATGGTTAATTCCGCATTCCTGTGGTGAAgcttgtaaaaaattattgcaaccAAATTGTGGGCATCGTTGTGTTTTACTTTGTCACCCGGGACCGTGTCCACCATGCCCACAAATAATCACAAAGTTGTGCAAATGTGAACAATCCAATCCAAAAACGATAAGATGTTCACAAAAGTCATGGACTTGCTCCAAAAAATGTCCACACATTTTATCATGTGGAATCCACGTATGTGGACAGGTTTGTCACATCGCGAAAACGGAATGTCCGCCGTGTAAAAAACGAAGCGTGCAAAAATGCCGTTGCGGTAAAAAATCGGAGGAGCGAAATTGTTCTTCAAGTACTTGGCTATGTGACATCGTTTGTAATAAGTCGTTTCCTTGTGGATTACATAAATGTTTGAAAACTTGTCACACGGGCAACTGTGGAGATTGTCCATTGGGTCTTCCACGCTCTTGTCCATGcggaaaacaaaaatctataGCCCCATGCTCGGAACAAGTCGATTCATGCGGCGGAACATGTCAAAAGTTATTACATTGTGGCATACACTTATGTACGCAACGATGTCACAAAGGTGACTGCTCCCAGTGTGTAGAAATTGTTGAGAAAAAGTGCAGATGCGGGTTGTACGCTAAAGAATTACCCTGTCACAAACAGTTTACTTGTGAAACAAAATGTAAGCAGATTCGAGAGTGCAAAAAACATCCCTGCAATAAGAAATGTTGCGATAACCAGTGTCCACCGTGTGATAAATTATGCGGAAAACCATTGCCCTGTGGAAAACATAAATGCAATTCACTTTGTCATAATGGGGAATGTTATCCGTGCAATAAAAAGGGACAATGTAAATGCCGATGTGGCCAAACGGTAATTGAAGTATCCTGCGGCAGGGAGCGTAAAACAAAACCGCCAAAATGCATGTTACCGTGCAGAATTTCATCGAAATGTCACCATGAGAATCCGCACCGTTGTCACCCGGGTGAATGTCCACCGTGCatacaaaaatgtaatttaacaaatactaCGACAAACTGTGAACATTTATGCGAATCAAAATGTCATGATTCGGTAAAAGTGACGACAATTGACAAGAATTTTAAACCAGCCGGACCTTGGGATGTTCAGGTTCctattgttgaaataaaaaaattaccgcATCCACCGTGTGATATAAAAGTTCCCGTCACATGTATTGGTGGTCACGAAACAAGTCTTTGGCCGTGTCATAACTCAAAGCCGACATCATGTTACCGAGAATGCGGACGTTTGCTGAATTGCCTAAACCATGTATGTAGTTTAGTATGTCATGCCGTGAAAGATTTGTCGTCGAAAACCCAAGAGGAATCTTGTGCTCCATGTCAACTTGGTTGCACGTTTTCTCGGCCAGAAGGGTGTTTACATCCGTGCAAACGGCCATGTCATCCGCCACCCTGTGCAAATTGTGGTGAACACATTAAATTCCCATGCCATTGTGGAATTGGagttatgtattttaaatgcagcgaattttattaccaaaaaactACAATGGATGAGAAGGAACGCGAAAATATGCTATCCTGTAAAAATCGTTGCACAAAAAATTACCCATGCGGTCATCGCTGTAAAGGTCTGTGTCATTCAGGATCATGCCCTCAGCCAGAGTtgtgcaacaaaaaaataaaagccacATGTGCCTGCAGCAATAAAAAAGTCGACATTACTTGTGATAAATTACGATCGGGTTTCATCCTGAACTGTGATGACACATGCAAAGAAAAGGAAGCATGCAAAAGGAAGGCGGCCGAAGAAAAAGCACGTCAGGAGCGATtaattgaagaagaaaaaaatcgtCAAGAACTAGAGGagtttgaaaagaaatttggTAAGAAAAAGTTTAAAGATCGTAAAAAGAACACGGTcgagataaagaaaaataataattttaagtattgGATTGGAAGTGCGGCTATTGTTGGTATAATAGccattctattattttattttattttctttaataaacaataa
- Protein Sequence
- MSNYRSPTNPWGNQKNSNGLSASQTSHSSIDTKKNKNKKKTQPQQQPVNKNKVSEQKFKDAHSKNVEAAKKHVKDYESSSDEEELQNVNIIESVFKSYSGVSSDLEKTQQFLENSFQSGSAICLICIGTVKRVDAIWSCGNCFCFFHLSCIQRWANDSISLKKLHADKETAYYNNSGEYVPKKKISIDFDCPKCRTVYMPEEIPRYYTCFCGNETNPQFHPWLIPHSCGEACKKLLQPNCGHRCVLLCHPGPCPPCPQIITKLCKCEQSNPKTIRCSQKSWTCSKKCPHILSCGIHVCGQVCHIAKTECPPCKKRSVQKCRCGKKSEERNCSSSTWLCDIVCNKSFPCGLHKCLKTCHTGNCGDCPLGLPRSCPCGKQKSIAPCSEQVDSCGGTCQKLLHCGIHLCTQRCHKGDCSQCVEIVEKKCRCGLYAKELPCHKQFTCETKCKQIRECKKHPCNKKCCDNQCPPCDKLCGKPLPCGKHKCNSLCHNGECYPCNKKGQCKCRCGQTVIEVSCGRERKTKPPKCMLPCRISSKCHHENPHRCHPGECPPCIQKCNLTNTTTNCEHLCESKCHDSVKVTTIDKNFKPAGPWDVQVPIVEIKKLPHPPCDIKVPVTCIGGHETSLWPCHNSKPTSCYRECGRLLNCLNHVCSLVCHAVKDLSSKTQEESCAPCQLGCTFSRPEGCLHPCKRPCHPPPCANCGEHIKFPCHCGIGVMYFKCSEFYYQKTTMDEKERENMLSCKNRCTKNYPCGHRCKGLCHSGSCPQPELCNKKIKATCACSNKKVDITCDKLRSGFILNCDDTCKEKEACKRKAAEEKARQERLIEEEKNRQELEEFEKKFGKKKFKDRKKNTVEIKKNNNFKYWIGSAAIVGIIAILLFYFIFFNKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01276644;
- 90% Identity
- -
- 80% Identity
- -