Pcon003376.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- pnr_2
- Assembly
- GCA_963942525.1
- Location
- OZ012636.1:27428766-27481669[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 3e+03 -2.2 0.0 22 29 233 240 230 243 0.73 2 3 0.034 63 3.2 0.1 5 15 783 793 783 799 0.83 3 3 7.8e-17 1.5e-13 50.0 4.4 1 35 827 860 827 861 0.98
Sequence Information
- Coding Sequence
- atgtgTAATGTACCGCCAAAGTTCTATCAAGTATGTCGTTTATGCTTGTCAGTGGTCAGTGAcaATGAAATACAATCGCAATTAAATGATGTCATCACAACAAAGCAGACAAcacaagcaaaaaatattgCTGCTTCACCAACACAAACAGATATAACAATATCATCATCgacattaacaaataaacgtGTTGGATGTGTAACAAAACATTCTGATGCAAACGATGATGGGGGTGATTCCTCAATATGTAATAATCTGAATAACACTGATGAAAGCTATTGTAATGACAAAAgtaatgataatataacagCAGATGGTAGTGTTACAACAGTTTCTTCAATAAAATCTGAAGAAGAAACTCAGTTAAACAATGATAAATGTGTTGACGCCACCGCCGCCGATTCggataatattgtaaatgacgATATCAATGATAATTATGAagctacaaataataaaaaatcaccaaTTCATTCGCATGACAATGAGAATATTGATGTAATAACAAAGATCACATCTCCTGTAGAAGATGATAAAGTTTCTAGTGTGACGTCATCGATATcacatgaaaatttatatgatgTCGATAATGATATTTTACTGAATGATGAATCAGATGATGTATTGGATTTACCACAGAGGATATATTCGTGCTTAGCAATTAAggtATCACCTAGTGATGGTTTACCAACAGTTGTTTGTACCGAATGCCGCGTGCATTTGGACAAGTGTCATCGATTTCGCAAAGTAGCATATGGTGCACAGAAGGCATTACAAAACTTTTTGAAATATGCAACTAAATTAAGTGGTAGTCAGCAGGATGTACTAGAGAAAACATCAGAAACATTAGATGAACTATTAGAACCGTCCACATTACGTAAAGCATCTGAGCGTACAGCTGTTGCCGCATTACAAGAATTAAGAAATACTGGATCAAATGGTGGTATGCTATTACCATTAaataaatcgataaaaattgaagaaactAAAGAATTATCatcagaattattaattttaacatcatcgtcatcatcagtAGAAGGAAAAGGTTTATCAGTACCAAATTTAGCATCAATGTCGCCAAAAATATTAACACCACCAAGAATTTCATCGCCTATGAATCATCAGCACCATTTGTCATCATCAGTTACCtcagttataagtaaaaatcaTCTTGACCATTTGGAAGCTAATTCTGTATCTGTGATACCAATTGATAGTAGCGGTAATGTGACAAATACGTCATCAccagttaataatattatacaaaCGACAACATCAACAGGAACTAATCTAGcaaataatagttataataatcgtTCGAAATTACCATTAacagttaaaaatttatcacaacTTCAACGTTTAGAAACAGCGGCTGTATTAATGGATATGAGTAAAAAAGTAATTGTTACACCACCAAATTCAAATCCGCATTCACCACATCATAATATAGTTACAACTACAAAtacatcatcgtcatcattattaagtattaatgaaaaaacacaaaGTATTGCATCACCTGTGATAAAGgctCAAGATTATGTTTTAAAGCATTTGAAACGATCAGGAAGTAATGAAGAAATTGATTtatcgtttaaaaaaattagacTACAACTACCAAAACAAGTTCAACAGCAGCAGATTcatcatcaacagcaacagcaccaGCTTCATCATAACAAACCAGTGAAGCAAGAAAATTCTGTGATTCAATCAAACGAATTATATAATGAAGATTATAGTCAACAAAGTGATTCAAATGATAGTTCTGATCCGGGACGTTTACAAGTTGATATTCAAGAAATTTCTGAAGATAATGATAttgataataacataaattttgtcaataaaataaaaaagacatcCTCACATACTTCGGGGCGTGATAGTAGTGGTAGTTGCAGTGGAGGAACAATGGCTACTAATTTAACAATAGGAAAATCTTCATCACGTAAATCATACGATATTGGACGTGAAACACCTGATAGTTTAATATCATCAGATGATCATCATGGTGGTAATAATGATGTCACTGATCCAGCAACAACACAATTATGGCAAGCATTAGCACAAACTACTGTCAATGGTGGTAGTGCAAATCACGCTACACAATTGTTACgtcaaatgataaataatcgAACATTGGGTTTGACGCTGCCAGCATTGGGCTTGCATTTAGAACAACCAATGCCTTTATCAAAGaatgaTATACCATCTGATCGCCATGTTCAATCCTCAAAATCATCAGGGCGGCGAAAACAATCTTGCCCAAGTCGGGCGCCATTAGAAGAAGTTGATATGTCTCTAGATGTGTCGTTAATTGATACAACAACTGATTTTGGTACTACCAATAGCCCGCAGTGGAATAATCATGTAGATGAACGAATAAGTAAAAGTTCATCAGCTCAaactcaaaataataaaaataataataataatcaacaacagcaacagaatAACAAAGACATGTCTTGTACTAATTGTGGTACATTAACGACTACTATTTGGCGCCGTAATATGCGTGGTGAAATGGTTTGCAATGCATGTGGTCTGTACTTTAAATTGCACGGTGTAAATCGTCCACACACTATGCGACGTGATACCATTCATACTCGTCGAAGAAGACCAAAGGGTGATAAGTCAAGTAGACGAAGtaaatCAAAAGCCGTACTTGCAGAACAAGAACAAAATGAAACGATAGAACGAACAAGTAGTGGTGGTGGATCTGGCGGAAATGGCGGTGGTTCTGGTGGTAGTAATACACCAGATTTACAAGCACTACAAAATCATAATCTGTTAATTGCCTTAGGTGGTGTTGCTCGGGGAGCTGGACAACATTTTCCGATGCCTCACTACTCTCATTTTTTGCGTGCCTCACATAATTTTTCAGATGTAactataattgaaaataatggtaatattggtggtaataataataatcttgatATACATACTGTTGATGATGACAGTGATTGTGGTGAAAACGAATCTGAAACATGTAATCTACCATTAAATTTAGTATCAACACAATTAGGTAGTGGCAATTGTAGTGATTCATCACAACACTGA
- Protein Sequence
- MCNVPPKFYQVCRLCLSVVSDNEIQSQLNDVITTKQTTQAKNIAASPTQTDITISSSTLTNKRVGCVTKHSDANDDGGDSSICNNLNNTDESYCNDKSNDNITADGSVTTVSSIKSEEETQLNNDKCVDATAADSDNIVNDDINDNYEATNNKKSPIHSHDNENIDVITKITSPVEDDKVSSVTSSISHENLYDVDNDILLNDESDDVLDLPQRIYSCLAIKVSPSDGLPTVVCTECRVHLDKCHRFRKVAYGAQKALQNFLKYATKLSGSQQDVLEKTSETLDELLEPSTLRKASERTAVAALQELRNTGSNGGMLLPLNKSIKIEETKELSSELLILTSSSSSVEGKGLSVPNLASMSPKILTPPRISSPMNHQHHLSSSVTSVISKNHLDHLEANSVSVIPIDSSGNVTNTSSPVNNIIQTTTSTGTNLANNSYNNRSKLPLTVKNLSQLQRLETAAVLMDMSKKVIVTPPNSNPHSPHHNIVTTTNTSSSSLLSINEKTQSIASPVIKAQDYVLKHLKRSGSNEEIDLSFKKIRLQLPKQVQQQQIHHQQQQHQLHHNKPVKQENSVIQSNELYNEDYSQQSDSNDSSDPGRLQVDIQEISEDNDIDNNINFVNKIKKTSSHTSGRDSSGSCSGGTMATNLTIGKSSSRKSYDIGRETPDSLISSDDHHGGNNDVTDPATTQLWQALAQTTVNGGSANHATQLLRQMINNRTLGLTLPALGLHLEQPMPLSKNDIPSDRHVQSSKSSGRRKQSCPSRAPLEEVDMSLDVSLIDTTTDFGTTNSPQWNNHVDERISKSSSAQTQNNKNNNNNQQQQQNNKDMSCTNCGTLTTTIWRRNMRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSSRRSKSKAVLAEQEQNETIERTSSGGGSGGNGGGSGGSNTPDLQALQNHNLLIALGGVARGAGQHFPMPHYSHFLRASHNFSDVTIIENNGNIGGNNNNLDIHTVDDDSDCGENESETCNLPLNLVSTQLGSGNCSDSSQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -