Basic Information

Gene Symbol
HINFP
Assembly
GCA_963942525.1
Location
OZ012639.1:21462473-21464387[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 1.1 71 4.1 1.0 1 23 136 160 136 160 0.96
2 9 3.7 2.5e+02 2.4 0.6 3 23 201 223 199 223 0.86
3 9 0.0013 0.084 13.3 1.1 3 23 245 267 243 267 0.95
4 9 3.5 2.3e+02 2.5 1.0 3 19 275 291 273 294 0.89
5 9 0.00086 0.057 13.8 0.6 1 23 303 325 303 325 0.98
6 9 0.0004 0.026 14.9 4.6 1 23 329 352 329 352 0.97
7 9 1.8e-05 0.0012 19.1 0.8 1 23 358 381 358 381 0.96
8 9 0.024 1.6 9.3 3.9 1 23 387 412 387 412 0.96
9 9 0.36 24 5.6 6.7 1 23 420 443 420 443 0.95

Sequence Information

Coding Sequence
ATGCCAAAAGCAAagcaaattaagaaaattgccaaaacaagaaaaaaggcAACTGAAATACATAAAACTGATGAAGAGAATAAAACTcctttaaatgtaaaatcaaGTATTAGTGATCGCTGTAAAAACTGGCTTTTAACGCAACAGGAAATTCCAGACAAGGAGAAATTAAAGGATTATCAATATGATTCGGACAGTGATGTGGATGATAATTCTGATGATGATCTTATATCGATATTAgaaCCTAACCTTGTGAAATTGCGAAAAATTCCAAAAGAGAAAAGAGATCTAATTATAGATGAATGTGAATGGTCTCAATGTACATTTAGTACacaaaataatgatatttattataatcatttaaaaacgCATGTCGAAGAGTGtattgaagaagaaaaagatgaATATAAATGTGATTGGCAATTGTGCAATTTTAAAAGTAGCAATGACAGGGCAATTACCAGGCATATTTTTTATCACGGCTATCATATGCATTTGAAAGGTGTTTCTAATAATTTACGAAGTTTATTCTCTTTTCCACCATGTCAAATTGATTCGAAAAAACGTAATGCTATACccgaattaaaaaatgattttctatGCGAATGGGATAACTGCGAGAAACATTTTATATCAATTCAAAtctatttaaaacatattaaagcACATTGTATTACCgatgataaaaatagaaaattaagtaCATTATTTCCCACAAAACCAGTACTGATTTGCAAGTGGTATAATTGtcagaaaaaatttaactcCTTATATCGTTTATTTGTTCATGTGCGAACCCATTCTAACGAGAAGAAAATTGCTTGCTCTCATTGTGGATCAATGCTCAGTAATAATACTATGTATTATGATCATTGCAAACGACAATTTggaaataatactgAAGAATACGAATGTATGCAATGCAATAAGTTATTTGCATCTGAACGACTTTTACGTGAACatgttaaaaatcatttaaataccCATAAATGTTACTTATGTGATATGTCATGCAGTAAAGCCTCATCTTTAGCAAAGCATATACGCTATCGGCATATAAATGAACGTCCGTATAAATGTACCCAGTGTAATAATggttttgtgcaaaaaaatgaTCTGACCAGGCATATAAATGCCAGTCACAGTGACAAAAATCCATTTGAATGTGATGAATTTGGTTGTGAATTCTCATGTAAAACAAGTATTACATTAAAACGACATCATCTAAAAGTACATGGTGAAATTGATTTAGATAATTATTGTTGTCATGTTTGTGAAAAACGTTACACCCAAGGTTGTCGTCTATcacaacatttaataaaagtacatGGATTTCAATATCCGGCTGGTCATACACGTTTTAATTATCGTGAAGATTTTGATGGTAATTTTCGTTTACAAACTGTACGCATCGAGAGTTTAGAAGTAACAAAAAAGATTATATCAACGCCAAGtattgagaaaaataatatacaaaataaagtcTATTCAATATCTGAAGTGAATAAAAcagatgataaattaataattgaattaaatgagaTTGTTAAAGAtgagaaacaacaaaatttaataactaaaacgTGTAATGATATTATATTACCACTTGATGATGATTCACAGGAGcgtgtattaaaaaatattgatgattttactgtaatgaaaaaatatataaaaagttcaaagaaaaatgttataatcAGTGTTGACGATACAGATAAAGATGGTAATATtgttaattcaaaaattataaatgcaaaGGATATACTTATAccatga
Protein Sequence
MPKAKQIKKIAKTRKKATEIHKTDEENKTPLNVKSSISDRCKNWLLTQQEIPDKEKLKDYQYDSDSDVDDNSDDDLISILEPNLVKLRKIPKEKRDLIIDECEWSQCTFSTQNNDIYYNHLKTHVEECIEEEKDEYKCDWQLCNFKSSNDRAITRHIFYHGYHMHLKGVSNNLRSLFSFPPCQIDSKKRNAIPELKNDFLCEWDNCEKHFISIQIYLKHIKAHCITDDKNRKLSTLFPTKPVLICKWYNCQKKFNSLYRLFVHVRTHSNEKKIACSHCGSMLSNNTMYYDHCKRQFGNNTEEYECMQCNKLFASERLLREHVKNHLNTHKCYLCDMSCSKASSLAKHIRYRHINERPYKCTQCNNGFVQKNDLTRHINASHSDKNPFECDEFGCEFSCKTSITLKRHHLKVHGEIDLDNYCCHVCEKRYTQGCRLSQHLIKVHGFQYPAGHTRFNYREDFDGNFRLQTVRIESLEVTKKIISTPSIEKNNIQNKVYSISEVNKTDDKLIIELNEIVKDEKQQNLITKTCNDIILPLDDDSQERVLKNIDDFTVMKKYIKSSKKNVIISVDDTDKDGNIVNSKIINAKDILIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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