Basic Information

Insect: Ptychoptera contaminata
Gene Symbol: L_1
Assembly: GCA_963942525.1
Location: OZ012636.1:31601824-31607177[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2 1.3e+02 3.2 5.9 1 23 3 25 3 25 0.97

2 17 2.2e-07 1.4e-05 25.2 3.1 1 23 31 53 31 53 0.99

3 17 1.8e-05 0.0012 19.1 0.2 1 23 59 81 59 81 0.98

4 17 7.8 5.1e+02 1.4 0.9 3 23 159 181 157 181 0.82

5 17 1.4 90 3.8 2.7 2 23 224 246 223 246 0.95

6 17 0.074 4.9 7.7 0.1 1 23 383 405 383 405 0.95

7 17 0.0011 0.069 13.6 0.6 1 23 415 437 415 437 0.94

8 17 0.0016 0.11 13.0 0.9 1 23 445 469 445 469 0.92

9 17 0.035 2.3 8.8 0.1 1 23 474 497 474 497 0.92

10 17 0.093 6.1 7.4 2.6 1 23 504 527 504 527 0.98

11 17 0.0012 0.077 13.4 1.8 1 23 559 581 559 582 0.96

12 17 1.1 72 4.1 0.7 1 23 796 820 796 820 0.90

13 17 0.0002 0.013 15.8 0.5 2 23 829 851 828 851 0.95

14 17 0.0067 0.44 11.0 0.1 1 23 857 879 857 879 0.97

15 17 0.0011 0.073 13.5 0.2 2 23 1008 1029 1007 1029 0.96

16 17 0.024 1.6 9.3 0.0 1 23 1039 1061 1039 1061 0.95

17 17 0.18 12 6.5 1.8 1 23 1068 1090 1068 1090 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2	1.3e+02	3.2	5.9	1	23	3	25	3	25	0.97
2	17	2.2e-07	1.4e-05	25.2	3.1	1	23	31	53	31	53	0.99
3	17	1.8e-05	0.0012	19.1	0.2	1	23	59	81	59	81	0.98
4	17	7.8	5.1e+02	1.4	0.9	3	23	159	181	157	181	0.82
5	17	1.4	90	3.8	2.7	2	23	224	246	223	246	0.95
6	17	0.074	4.9	7.7	0.1	1	23	383	405	383	405	0.95
7	17	0.0011	0.069	13.6	0.6	1	23	415	437	415	437	0.94
8	17	0.0016	0.11	13.0	0.9	1	23	445	469	445	469	0.92
9	17	0.035	2.3	8.8	0.1	1	23	474	497	474	497	0.92
10	17	0.093	6.1	7.4	2.6	1	23	504	527	504	527	0.98
11	17	0.0012	0.077	13.4	1.8	1	23	559	581	559	582	0.96
12	17	1.1	72	4.1	0.7	1	23	796	820	796	820	0.90
13	17	0.0002	0.013	15.8	0.5	2	23	829	851	828	851	0.95
14	17	0.0067	0.44	11.0	0.1	1	23	857	879	857	879	0.97
15	17	0.0011	0.073	13.5	0.2	2	23	1008	1029	1007	1029	0.96
16	17	0.024	1.6	9.3	0.0	1	23	1039	1061	1039	1061	0.95
17	17	0.18	12	6.5	1.8	1	23	1068	1090	1068	1090	0.95

Sequence Information

Coding Sequence: ATGCCATTTAAATGTGAATTTTGTGCTCGTCTGTTTAAACATAAGAGGTCAAGAGATCGTCATACGAAATTGCATACTGGAGATAGAAGATACCGATGTCCTCATTGTGAGGCGGCCTTTTCCAGAAGtgATCACCTAAAAATTCATATGAAAACTCATGATAATCAAAAACCGTTTCAATGTACTGTTTGTAATCGTGGATATAATACCGCCGCCGCACTAACATCACACATGCAAAATCATAAGAAACAAGCCGCACTATTAGGCAGTCCATCATTGAATAATTATAGTCCACGTTCGACAGGTTCAACTGGTTCGAGTACAGCTAGTAGCacacaaaaacgaaaatattcgTCAATCCCTTTACATcttcaacatcaacaacaacagcagctaaCATCTATTGGTGGTAATCATCCATTGGATTACACAAATAATTTCATGAAAAAATACACAACGGCAGGTAGAATTAATTGTCTTTATTGTACTAAAACGGATTTTGTGAGCATGGATAAACTACATCAGCATATGGAAGCAATGCATGGCGGGATAATACGAAATGAGGTACAATTTTTCACATTTGTTTCGTTTAATTATGGCAATAATAaagtattgtttttttgtgaTCAGCAATTGCCCCATACAGGGAATACGCCTAATCTACAATTATCCTGTGAATTTTGCACAATGAAATTTAGTTCAGTACAGGTTATGTTTCACCACTTAAAATCCACACATTTAGATCGTATGTCCGCCAATAGTCCGAACGGATTTTTATCATACTTTGGACGTAATTTTGGTGTCAGTATGGATGACATCAACTGTCATAGTCTATTTAAAAGCCCTTCAAATGAGGATTGTAAGAAATTAGAATTTCCTTCTGATGATgataagaagaaaattgaCCTTGAATCGGATACTACAAGTGATATTCGAAAAAGTCCAATAATACcgaatataaaacaagaaagCATGGATTGTGAATTGCCGCAAGAGCAAGATGTGCCTACGGATTTAAGCCAACCAAAATCTAAACGTTTGTGTACCGCTAGTCCCAATGGCCGCGGGAACGAACAACAAATAGAGAAATTGTCTCCTATACAACCAATGAAACTATCTCCACCAGTACCAGTCGAGCCACCCGCATTTCTTTGTAATCAATGTAATGCTGCATTACCTGATTTTGATGGTTTTCGTGCACATTTAAAATCACATCTGGAGCAGGGTGGCATAAATAACTCTTTCCTTTGTCAACATTGTGGCATTACATTCACAGAACAAGCAACCTACGAAAGCCATGTGGCGTCTCATTTTCTGATATCCAGTGTTGAATACAGTTGTACAAATAGCTGCAACAAGGCATTCCAGAAGCCAGATGATcttcaaaaacatttatttgagAGTCATTCACAAATCCTATACAAATGCAACATTTGCTCAGAATTGTTTGAAACAAAAGTCGCTATACAGGTTCACTTTGCTGTTGGTCactcaaatgaaataaaaatttatcgatGCTCAGCTTGTATGGAAGTTTATCGCACTGATAACGAATTCCGTCATCATATACGGACAAGACATACAACGTCCGGTGCTGTACAATGTATTTTCTGTCGTACTATTTGCTCATCAGAATTAGAAATGCACTTTCATTTAGCAGCTCATGCACGACAATATCGATGCCCAGCATGTCCAGAATCATTTcatgttgaatttttattggatCGACATATGCAGACACACCATTCATCACAGcaatatcataataaaaatgtaatcaataacaataacaataataacagtaTTGTAAAGAATAACAACATCAGCAATAACAACATACTGGACTACCAGCAAacatcaaatgaaaaaaatttgctCTACAATTTTAGTGGCACTTCAAATTTagctgataaattatttaatccatTGCAATTAGACACAATAAAACATCACCAACAGCAACAAATGGCACGTAATATTTATGATGTTGGAAATTTAGGTAAAAGAATTTCAACAACACCAATATCGGGTAGTAGTACATTGGGTGGCCTACTTCtcgatagtaataaaaattatcaaaatgcaaataaaaacttgATTGGCTTATATAATCCAGTGGAGAGTATGTCTGTTGcacaaaaattacataatttggaTCCTAATTATGGGCGTTTTCATAACACCGTTCATGATGCAGTTATTAAAAGTCATTTATTCGATGCATTACCGTCAAATTTGGCGGTCTATCATGAGGCACTTAAGGCGCCAACATCAATTTCCAACAGCTTGAATACACTTAAAACTCTATCAACATCTAATTCAAATTCTAGTAATATTACACCAGGAACTGGTAATTCTGGACGTTACTGCATCACAGAAAAGGGTTACAGCTGTGGTATATGCGAAAGAAATGACTTCAGTACCGAATCGGAGGTACACAATCATCGAAAAGTTGttcataatattaaaacaggGGTCAGTTTGCGATGTGCCTACTGCAACGGTGATTTTAGATCTAGaagTGAATTAGAGAATCACATGAAATTATCCCATAATACGTCTGGGAAGCATAAATGCTTAATTTGTGATGAAATTTTTCCATCGCCAGCTGTACTAGCTGAGCACAAGTTGAGTCATTGCAAAGTTGGCGCATCTGGAAAATGTTCCAATTGTATGGCATTACTACCGGAtgtattaacatttaaagGACATTTAAGCGAACACAATGAACAAGAGCTTCCTGTGCAATGTATCTGCTGTAGACAAACATTAAATTCCGAATTCGAAATAAGTCTTCATGccaaatTTCATACAAAAACATCTGAAAGCTCGGTAAACACTTGTGCTCTATGCTTAGAACCACTTCCATCGACGAATGATACAAAGATATGCGAAAATTGCTATAAAAAACGTAATTTTTCACATCCTGCAATATCAAGCATAACTGGTGGCGCGCAGCAGCAGATGCAATCTTTACAACCAGAACATTTAAAACGAGAACTAACCACATCGACCGATGTTCGTTGTAATCTATGCAAGAAAAATTTCCCGACAGCAATCAAATTGCAAGAGCATCTAATAGAACACACATTTGCCGGCTGTGAAGATCGTggatatatttgttttatttgctcATCCGTATTTACAGCGCCCGGTGGGCTTCAGAACCATATTGTCGAACATGGACTTGCATCACGACCCTACGACTGCACTTTTTGTACGGctaaatttttctttcgcGCTGAACTAGATCATCATATGGTTGAGCATGAAAGCGTAAGTAGTTGTAAAGAGGATGAGCATTTAATTGCTAAATCAGGGACTATTTGTGAACAAGAAAAGGCTGAAATTATGCAAACTGGGAAAATGAAAATGGAAGAGAATTTAAACGAAACTAGCAGCAATAATGATGGGATTCAGTCTAATCACAGTAACCTTGAAGAAGACGAACACATTGAAGttgaaaaattaccaaaagaTGAGAAATTAGAGACAAATTTAAATCATCTTAGTGAAAATAATCCAACGAACATGTTAACAAACGGTAATGTTGGCAAcagtgaataa
Protein Sequence: MPFKCEFCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQAALLGSPSLNNYSPRSTGSTGSSTASSTQKRKYSSIPLHLQHQQQQQLTSIGGNHPLDYTNNFMKKYTTAGRINCLYCTKTDFVSMDKLHQHMEAMHGGIIRNEVQFFTFVSFNYGNNKVLFFCDQQLPHTGNTPNLQLSCEFCTMKFSSVQVMFHHLKSTHLDRMSANSPNGFLSYFGRNFGVSMDDINCHSLFKSPSNEDCKKLEFPSDDDKKKIDLESDTTSDIRKSPIIPNIKQESMDCELPQEQDVPTDLSQPKSKRLCTASPNGRGNEQQIEKLSPIQPMKLSPPVPVEPPAFLCNQCNAALPDFDGFRAHLKSHLEQGGINNSFLCQHCGITFTEQATYESHVASHFLISSVEYSCTNSCNKAFQKPDDLQKHLFESHSQILYKCNICSELFETKVAIQVHFAVGHSNEIKIYRCSACMEVYRTDNEFRHHIRTRHTTSGAVQCIFCRTICSSELEMHFHLAAHARQYRCPACPESFHVEFLLDRHMQTHHSSQQYHNKNVINNNNNNNSIVKNNNISNNNILDYQQTSNEKNLLYNFSGTSNLADKLFNPLQLDTIKHHQQQQMARNIYDVGNLGKRISTTPISGSSTLGGLLLDSNKNYQNANKNLIGLYNPVESMSVAQKLHNLDPNYGRFHNTVHDAVIKSHLFDALPSNLAVYHEALKAPTSISNSLNTLKTLSTSNSNSSNITPGTGNSGRYCITEKGYSCGICERNDFSTESEVHNHRKVVHNIKTGVSLRCAYCNGDFRSRSELENHMKLSHNTSGKHKCLICDEIFPSPAVLAEHKLSHCKVGASGKCSNCMALLPDVLTFKGHLSEHNEQELPVQCICCRQTLNSEFEISLHAKFHTKTSESSVNTCALCLEPLPSTNDTKICENCYKKRNFSHPAISSITGGAQQQMQSLQPEHLKRELTTSTDVRCNLCKKNFPTAIKLQEHLIEHTFAGCEDRGYICFICSSVFTAPGGLQNHIVEHGLASRPYDCTFCTAKFFFRAELDHHMVEHESVSSCKEDEHLIAKSGTICEQEKAEIMQTGKMKMEENLNETSSNNDGIQSNHSNLEEDEHIEVEKLPKDEKLETNLNHLSENNPTNMLTNGNVGNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01276444;
90% Identity: -
80% Identity: -